RNA–Protein interactions for RNA: YGR165W

MRPS35, Transcript of Mitochondrial ribosomal protein of the small subunit, yeast

Gene MRPS35, Length 1,038 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MRPS35	YGR165W	RPL26A	P05743	127 aa	Known RBP	2.69	□□□□□ -1.98
MRPS35	YGR165W	DBF2	P22204	572 aa		2.69	□□□□□ -1.98
MRPS35	YGR165W	TCA17	P32613	152 aa		2.69	□□□□□ -1.98
MRPS35	YGR165W	UTR5	P32630	166 aa		2.69	□□□□□ -1.98
MRPS35	YGR165W	CLG1	P35190	452 aa		2.69	□□□□□ -1.98
MRPS35	YGR165W	YER121W	P40076	114 aa		2.69	□□□□□ -1.98
MRPS35	YGR165W	ARC15	P40518	154 aa	RIP-Chip data	2.69	□□□□□ -1.98	not detected
MRPS35	YGR165W	YFL051C	P43552	160 aa		2.69	□□□□□ -1.98
MRPS35	YGR165W	CWC23	P52868	283 aa	Predicted RBP	2.69	□□□□□ -1.98
MRPS35	YGR165W	RPL26B	P53221	127 aa	Known RBP	2.69	□□□□□ -1.98
MRPS35	YGR165W	NUP49	Q02199	472 aa		2.69	□□□□□ -1.98
MRPS35	YGR165W	PST2	Q12335	198 aa	Known RBP	2.69	□□□□□ -1.98
MRPS35	YGR165W	DCN1	Q12395	269 aa		2.69	□□□□□ -1.98
MRPS35	YGR165W	MED11	Q99278	115 aa		2.69	□□□□□ -1.98
MRPS35	YGR165W	CDC28	P00546	298 aa	Known RBP	2.68	□□□□□ -1.98
MRPS35	YGR165W	Q0255	P03881	472 aa		2.68	□□□□□ -1.98
MRPS35	YGR165W	IPT1	P38954	527 aa		2.68	□□□□□ -1.98
MRPS35	YGR165W	SMD3	P43321	101 aa	Known RBP	2.68	□□□□□ -1.98
MRPS35	YGR165W	CCC1	P47818	322 aa		2.68	□□□□□ -1.98
MRPS35	YGR165W	NRK1	P53915	240 aa		2.68	□□□□□ -1.98
MRPS35	YGR165W	TLG1	Q03322	224 aa		2.68	□□□□□ -1.98
MRPS35	YGR165W	AIM36	Q03798	255 aa		2.68	□□□□□ -1.98
MRPS35	YGR165W	GPI17	Q04080	534 aa		2.68	□□□□□ -1.98
MRPS35	YGR165W	YDR391C	Q04170	232 aa		2.68	□□□□□ -1.98
MRPS35	YGR165W	GAL83	Q04739	417 aa		2.68	□□□□□ -1.98
MRPS35	YGR165W	NEJ1	Q06148	342 aa		2.68	□□□□□ -1.98
MRPS35	YGR165W	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	2.68	□□□□□ -1.98	not detected
MRPS35	YGR165W	FIT3	Q08907	204 aa		2.68	□□□□□ -1.98
MRPS35	YGR165W	USB1	Q12208	290 aa	Known RBP	2.68	□□□□□ -1.98
MRPS35	YGR165W	KIN28	P06242	306 aa		2.67	□□□□□ -1.98
MRPS35	YGR165W	FCY2	P17064	533 aa		2.67	□□□□□ -1.98
MRPS35	YGR165W	ECM4	P36156	370 aa		2.67	□□□□□ -1.98
MRPS35	YGR165W	EGD2	P38879	174 aa	Known RBP	2.67	□□□□□ -1.98
MRPS35	YGR165W	PDS1	P40316	373 aa	Predicted RBP	2.67	□□□□□ -1.98
MRPS35	YGR165W	GVP36	P40531	326 aa	Known RBP	2.67	□□□□□ -1.98
MRPS35	YGR165W	RPA43	P46669	326 aa		2.67	□□□□□ -1.98
MRPS35	YGR165W	HAM1	P47119	197 aa	Known RBP	2.67	□□□□□ -1.98
MRPS35	YGR165W	RBL2	P48606	106 aa	Known RBP	2.67	□□□□□ -1.98
MRPS35	YGR165W	SBH2	P52871	88 aa		2.67	□□□□□ -1.98
MRPS35	YGR165W	MGA1	P53050	456 aa		2.67	□□□□□ -1.98
MRPS35	YGR165W	ATG39	Q06159	398 aa		2.67	□□□□□ -1.98
MRPS35	YGR165W	YBR063C	P38083	404 aa		2.66	□□□□□ -1.98
MRPS35	YGR165W	YBR285W	P38354	144 aa		2.66	□□□□□ -1.98
MRPS35	YGR165W	RPF1	P38805	295 aa	Known RBP	2.66	□□□□□ -1.98
MRPS35	YGR165W	NVJ1	P38881	321 aa		2.66	□□□□□ -1.98
MRPS35	YGR165W	YAR068W	P39564	161 aa		2.66	□□□□□ -1.98
MRPS35	YGR165W	DLS1	P40366	167 aa		2.66	□□□□□ -1.98
MRPS35	YGR165W	TIR3	P40552	269 aa		2.66	□□□□□ -1.98
MRPS35	YGR165W	SAY1	P53324	424 aa		2.66	□□□□□ -1.98
MRPS35	YGR165W	PAU12	P53343	120 aa		2.66	□□□□□ -1.98
MRPS35	YGR165W	TMA20	P89886	181 aa	Predicted RBP	2.66	□□□□□ -1.98
MRPS35	YGR165W	SED1	Q01589	338 aa		2.66	□□□□□ -1.98
MRPS35	YGR165W	YPL067C	Q02754	198 aa		2.66	□□□□□ -1.98
MRPS35	YGR165W	YDC1	Q02896	317 aa		2.66	□□□□□ -1.98
MRPS35	YGR165W	YMR099C	Q03161	297 aa	Known RBP	2.66	□□□□□ -1.98
MRPS35	YGR165W	RFU1	Q08003	200 aa		2.66	□□□□□ -1.98
MRPS35	YGR165W	YOR020W-A	Q3E824	90 aa		2.66	□□□□□ -1.98
MRPS35	YGR165W	Q0297	Q9ZZV8	51 aa		2.66	□□□□□ -1.98
MRPS35	YGR165W	BLM10	P43583	2143 aa		2.65	□□□□□ -1.98
MRPS35	YGR165W	QCR7	P00128	127 aa		2.65	□□□□□ -1.99
MRPS35	YGR165W	COX9	P07255	59 aa		2.65	□□□□□ -1.99
MRPS35	YGR165W	AHC2	P25649	128 aa		2.65	□□□□□ -1.99
MRPS35	YGR165W	CTR2	P38865	189 aa		2.65	□□□□□ -1.99
MRPS35	YGR165W	FLX1	P40464	311 aa		2.65	□□□□□ -1.99
MRPS35	YGR165W	YKR005C	Q02203	525 aa		2.65	□□□□□ -1.99
MRPS35	YGR165W	YMR279C	Q03263	540 aa		2.65	□□□□□ -1.99
MRPS35	YGR165W	COX5B	P00425	151 aa		2.64	□□□□□ -1.99
MRPS35	YGR165W	RPL30	P14120	105 aa	Known RBP	2.64	□□□□□ -1.99
MRPS35	YGR165W	VMA11	P32842	164 aa		2.64	□□□□□ -1.99
MRPS35	YGR165W	SHE2	P36068	246 aa	Known RBP RIP-Chip data	2.64	□□□□□ -1.99	not detected
MRPS35	YGR165W	PAU24	P38155	120 aa		2.64	□□□□□ -1.99
MRPS35	YGR165W	FMP23	P38231	175 aa		2.64	□□□□□ -1.99
MRPS35	YGR165W	LSM4	P40070	187 aa	Known RBP	2.64	□□□□□ -1.99
MRPS35	YGR165W	ERJ5	P43613	295 aa	Predicted RBP	2.64	□□□□□ -1.99
MRPS35	YGR165W	SNX4	P47057	423 aa		2.64	□□□□□ -1.99
MRPS35	YGR165W	BXI1	P48558	297 aa		2.64	□□□□□ -1.99
MRPS35	YGR165W	YNR064C	P53750	290 aa		2.64	□□□□□ -1.99
MRPS35	YGR165W	HHT1	P61830	136 aa		2.64	□□□□□ -1.99
MRPS35	YGR165W	RGM1	Q00453	211 aa		2.64	□□□□□ -1.99
MRPS35	YGR165W	YDR248C	Q03786	193 aa		2.64	□□□□□ -1.99
MRPS35	YGR165W	ADH3	P07246	375 aa	Known RBP	2.63	□□□□□ -1.99
MRPS35	YGR165W	YPR170W-B	P0C5R9	85 aa		2.63	□□□□□ -1.99
MRPS35	YGR165W	MRPS28	P21771	286 aa		2.63	□□□□□ -1.99
MRPS35	YGR165W	APA2	P22108	325 aa		2.63	□□□□□ -1.99
MRPS35	YGR165W	PAU2	P32612	120 aa		2.63	□□□□□ -1.99
MRPS35	YGR165W	SNC2	P33328	115 aa		2.63	□□□□□ -1.99
MRPS35	YGR165W	TMA19	P35691	167 aa	Known RBP	2.63	□□□□□ -1.99
MRPS35	YGR165W	SFK1	P35735	353 aa		2.63	□□□□□ -1.99
MRPS35	YGR165W	ECM33	P38248	429 aa	Known RBP	2.63	□□□□□ -1.99
MRPS35	YGR165W	RIO2	P40160	425 aa	Known RBP	2.63	□□□□□ -1.99
MRPS35	YGR165W	YIR020C	P40575	100 aa		2.63	□□□□□ -1.99
MRPS35	YGR165W	MRPL49	P40858	161 aa	Predicted RBP	2.63	□□□□□ -1.99
MRPS35	YGR165W	GLR1	P41921	483 aa	Known RBP	2.63	□□□□□ -1.99
MRPS35	YGR165W	YGL204C	P53089	101 aa		2.63	□□□□□ -1.99
MRPS35	YGR165W	GEP7	P53171	287 aa		2.63	□□□□□ -1.99
MRPS35	YGR165W	CGR1	P53188	120 aa		2.63	□□□□□ -1.99
MRPS35	YGR165W	GRX5	Q02784	150 aa		2.63	□□□□□ -1.99
MRPS35	YGR165W	RRP17	Q04031	235 aa	Predicted RBP	2.63	□□□□□ -1.99
MRPS35	YGR165W	CSI2	Q08054	341 aa		2.63	□□□□□ -1.99
MRPS35	YGR165W	CDC39	P25655	2108 aa	Known RBP	2.63	□□□□□ -1.99

Retrieved 100 of 5,963 RNA–protein pairs in 22.7 ms