RNA–Protein interactions for RNA: YDR220C

YDR220C, Transcript of Dubious open reading frame, yeast

Gene YDR220C, Length 294 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YDR220C	YDR220C	GRX3	Q03835	250 aa		0.56	□□□□□ -2.32
YDR220C	YDR220C	AVO2	Q04749	426 aa		0.56	□□□□□ -2.32
YDR220C	YDR220C	SPS2	P08459	502 aa		0.55	□□□□□ -2.32
YDR220C	YDR220C	ATP7	P30902	174 aa		0.55	□□□□□ -2.32
YDR220C	YDR220C	NUF2	P33895	451 aa		0.55	□□□□□ -2.32
YDR220C	YDR220C	MOB1	P40484	314 aa		0.55	□□□□□ -2.32
YDR220C	YDR220C	GLR1	P41921	483 aa	Known RBP	0.55	□□□□□ -2.32
YDR220C	YDR220C	BRX1	Q08235	291 aa	Known RBP	0.55	□□□□□ -2.32
YDR220C	YDR220C	YDL157C	Q12082	118 aa		0.55	□□□□□ -2.32
YDR220C	YDR220C	PRP8	P33334	2413 aa	Known RBP	0.55	□□□□□ -2.32
YDR220C	YDR220C	RPS25B	P0C0T4	108 aa	Known RBP	0.54	□□□□□ -2.32
YDR220C	YDR220C	YOL013W-A	P0C272	63 aa	Predicted RBP	0.54	□□□□□ -2.32
YDR220C	YDR220C	YGR269W	P40326	108 aa		0.54	□□□□□ -2.32
YDR220C	YDR220C	POG1	P40473	351 aa		0.54	□□□□□ -2.32
YDR220C	YDR220C	SOL1	P50278	321 aa		0.54	□□□□□ -2.32
YDR220C	YDR220C	HOP2	P53187	214 aa		0.54	□□□□□ -2.32
YDR220C	YDR220C	NQM1	P53228	333 aa	Predicted RBP	0.54	□□□□□ -2.32
YDR220C	YDR220C	FCY1	Q12178	158 aa		0.54	□□□□□ -2.32
YDR220C	YDR220C	RPS25A	Q3E792	108 aa	Predicted RBP	0.54	□□□□□ -2.32
YDR220C	YDR220C	DUR1,2	P32528	1835 aa	Known RBP	0.53	□□□□□ -2.32
YDR220C	YDR220C	KIN28	P06242	306 aa		0.53	□□□□□ -2.32
YDR220C	YDR220C	HHY1	P39982	102 aa		0.53	□□□□□ -2.32
YDR220C	YDR220C	GLC8	P41818	229 aa		0.53	□□□□□ -2.32
YDR220C	YDR220C	PLP1	Q04004	230 aa		0.53	□□□□□ -2.32
YDR220C	YDR220C	YEL028W	P39989	153 aa		0.52	□□□□□ -2.33
YDR220C	YDR220C	CIN5	P40917	295 aa		0.52	□□□□□ -2.33
YDR220C	YDR220C	APS3	P47064	194 aa		0.52	□□□□□ -2.33
YDR220C	YDR220C	ATG10	Q07879	167 aa		0.52	□□□□□ -2.33
YDR220C	YDR220C	TRR1	P29509	319 aa	Known RBP	0.51	□□□□□ -2.33
YDR220C	YDR220C	YBR027C	P38220	110 aa		0.51	□□□□□ -2.33
YDR220C	YDR220C	CSH1	P38287	376 aa		0.51	□□□□□ -2.33
YDR220C	YDR220C	SYM1	Q06563	197 aa		0.51	□□□□□ -2.33
YDR220C	YDR220C	HRD1	Q08109	551 aa		0.51	□□□□□ -2.33
YDR220C	YDR220C	PRM3	Q08931	133 aa		0.51	□□□□□ -2.33
YDR220C	YDR220C	INO4	P13902	151 aa		0.5	□□□□□ -2.33
YDR220C	YDR220C	CCC1	P47818	322 aa		0.5	□□□□□ -2.33
YDR220C	YDR220C	LIP1	Q03579	150 aa		0.5	□□□□□ -2.33
YDR220C	YDR220C	YLR050C	Q12155	161 aa	Known RBP	0.5	□□□□□ -2.33
YDR220C	YDR220C	PEX11	Q12462	236 aa		0.5	□□□□□ -2.33
YDR220C	YDR220C	YHR213W-B	Q8TGK1	99 aa		0.5	□□□□□ -2.33
YDR220C	YDR220C	TRM3	Q07527	1436 aa		0.49	□□□□□ -2.33
YDR220C	YDR220C	YPT31	P38555	223 aa	Known RBP	0.49	□□□□□ -2.33
YDR220C	YDR220C	SEC72	P39742	193 aa	Known RBP	0.49	□□□□□ -2.33
YDR220C	YDR220C	GEP7	P53171	287 aa		0.49	□□□□□ -2.33
YDR220C	YDR220C	SPT14	P32363	452 aa		0.48	□□□□□ -2.33
YDR220C	YDR220C	GIM3	P53900	129 aa		0.48	□□□□□ -2.33
YDR220C	YDR220C	YDR102C	Q03864	110 aa		0.48	□□□□□ -2.33
YDR220C	YDR220C	THI74	Q04083	370 aa		0.48	□□□□□ -2.33
YDR220C	YDR220C	YDL241W	Q07738	123 aa		0.48	□□□□□ -2.33
YDR220C	YDR220C	UIP4	Q08926	304 aa		0.48	□□□□□ -2.33
YDR220C	YDR220C	RIF1	P29539	1916 aa		0.47	□□□□□ -2.33
YDR220C	YDR220C	RAD51	P25454	400 aa		0.47	□□□□□ -2.33
YDR220C	YDR220C	SRP102	P36057	244 aa	Predicted RBP	0.47	□□□□□ -2.33
YDR220C	YDR220C	YIP3	P53633	176 aa		0.47	□□□□□ -2.33
YDR220C	YDR220C	SED1	Q01589	338 aa		0.47	□□□□□ -2.33
YDR220C	YDR220C	YPR114W	Q06107	315 aa		0.47	□□□□□ -2.33
YDR220C	YDR220C	ATG8	P38182	117 aa	RIP-Chip data	0.46	□□□□□ -2.34	not detected
YDR220C	YDR220C	HSK3	P69852	69 aa		0.46	□□□□□ -2.34
YDR220C	YDR220C	VAM10	Q08474	114 aa		0.46	□□□□□ -2.34
YDR220C	YDR220C	RIB3	Q99258	208 aa		0.46	□□□□□ -2.34
YDR220C	YDR220C	CDC39	P25655	2108 aa	Known RBP	0.46	□□□□□ -2.34
YDR220C	YDR220C	CMD1	P06787	147 aa	Known RBP	0.45	□□□□□ -2.34
YDR220C	YDR220C	EGD2	P38879	174 aa	Known RBP	0.45	□□□□□ -2.34
YDR220C	YDR220C	YEL014C	P39999	101 aa		0.45	□□□□□ -2.34
YDR220C	YDR220C	CMC4	Q3E7A9	73 aa		0.45	□□□□□ -2.34
YDR220C	YDR220C	ROM2	P51862	1356 aa	Known RBP	0.45	□□□□□ -2.34
YDR220C	YDR220C	UBC6	P33296	250 aa	Predicted RBP	0.44	□□□□□ -2.34
YDR220C	YDR220C	SRP14	P38985	146 aa		0.44	□□□□□ -2.34
YDR220C	YDR220C	YGL101W	P53144	215 aa		0.44	□□□□□ -2.34
YDR220C	YDR220C	YNL140C	P53910	189 aa		0.44	□□□□□ -2.34
YDR220C	YDR220C	YNL122C	P53921	115 aa	Predicted RBP	0.44	□□□□□ -2.34
YDR220C	YDR220C	TAF2	P23255	1407 aa		0.44	□□□□□ -2.34
YDR220C	YDR220C	RPS22A	P0C0W1	130 aa	Known RBP	0.43	□□□□□ -2.34
YDR220C	YDR220C	TMA20	P89886	181 aa	Predicted RBP	0.43	□□□□□ -2.34
YDR220C	YDR220C	YOR072W	Q08486	104 aa		0.43	□□□□□ -2.34
YDR220C	YDR220C	GRE1	Q08969	168 aa		0.43	□□□□□ -2.34
YDR220C	YDR220C	RPS22B	Q3E7Y3	130 aa	Known RBP	0.43	□□□□□ -2.34
YDR220C	YDR220C	HSP150	P32478	413 aa		0.42	□□□□□ -2.34
YDR220C	YDR220C	PTC1	P35182	281 aa		0.42	□□□□□ -2.34
YDR220C	YDR220C	YNR064C	P53750	290 aa		0.42	□□□□□ -2.34
YDR220C	YDR220C	MGR2	Q02889	113 aa		0.42	□□□□□ -2.34
YDR220C	YDR220C	HAP2	P06774	265 aa		0.41	□□□□□ -2.34
YDR220C	YDR220C	HYP2	P23301	157 aa	Known RBP	0.41	□□□□□ -2.34
YDR220C	YDR220C	ECM31	P38122	312 aa		0.41	□□□□□ -2.34
YDR220C	YDR220C	HTD2	P38790	280 aa	Known RBP	0.41	□□□□□ -2.34
YDR220C	YDR220C	NMA1	Q06178	401 aa	Known RBP	0.41	□□□□□ -2.34
YDR220C	YDR220C	ATP5	P09457	212 aa		0.4	□□□□□ -2.35
YDR220C	YDR220C	MRS4	P23500	304 aa		0.4	□□□□□ -2.35
YDR220C	YDR220C	SRP21	P32342	167 aa		0.39	□□□□□ -2.35
YDR220C	YDR220C	YMR141C	P40211	102 aa		0.39	□□□□□ -2.35
YDR220C	YDR220C	FMN1	Q03778	218 aa		0.39	□□□□□ -2.35
YDR220C	YDR220C	SEN15	Q04675	128 aa		0.39	□□□□□ -2.35
YDR220C	YDR220C	ATG38	Q05789	226 aa	Known RBP	0.39	□□□□□ -2.35
YDR220C	YDR220C	RDI1	Q12434	202 aa		0.39	□□□□□ -2.35
YDR220C	YDR220C	ADE6	P38972	1358 aa	Known RBP	0.39	□□□□□ -2.35
YDR220C	YDR220C	RPL35A	P0CX84	120 aa	Known RBP	0.38	□□□□□ -2.35
YDR220C	YDR220C	RPL35B	P0CX85	120 aa	Known RBP	0.38	□□□□□ -2.35
YDR220C	YDR220C	YHR140W	P38842	239 aa		0.38	□□□□□ -2.35
YDR220C	YDR220C	IRC19	Q07843	230 aa		0.38	□□□□□ -2.35
YDR220C	YDR220C	YLR046C	Q12253	270 aa		0.38	□□□□□ -2.35

Retrieved 100 of 5,963 RNA–protein pairs in 22.9 ms