RNA–Protein interactions for RNA: ENST00000628867.1

SPTAN1-215, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-215ENST00000628867 RUFY3Q7L099 469 aa8.29□□□□□ -1.08
SPTAN1-215ENST00000628867 RABEPKQ7Z6M1 372 aa8.29□□□□□ -1.08
SPTAN1-215ENST00000628867 TMEFF1Q8IYR6 380 aa8.29□□□□□ -1.08
SPTAN1-215ENST00000628867 CCDC33Q8N5R6 958 aa8.29□□□□□ -1.08
SPTAN1-215ENST00000628867 BEST2Q8NFU1 509 aa8.29□□□□□ -1.08
SPTAN1-215ENST00000628867 ATP2A3Q93084 1043 aa8.29□□□□□ -1.08
SPTAN1-215ENST00000628867 CHFRQ96EP1 664 aa8.29□□□□□ -1.08
SPTAN1-215ENST00000628867 LPIN3Q9BQK8 851 aa8.29□□□□□ -1.08
SPTAN1-215ENST00000628867 TARS2Q9BW92 718 aaKnown RBP8.29□□□□□ -1.08
SPTAN1-215ENST00000628867 AGXT2Q9BYV1 514 aa8.29□□□□□ -1.08
SPTAN1-215ENST00000628867 DNAJC25Q9H1X3 360 aa8.29□□□□□ -1.08
SPTAN1-215ENST00000628867 ECT2Q9H8V3 914 aa8.29□□□□□ -1.08
SPTAN1-215ENST00000628867 FBRSL1Q9HCM7 1045 aaKnown RBP8.29□□□□□ -1.08
SPTAN1-215ENST00000628867 POLMQ9NP87 494 aaPredicted RBP8.29□□□□□ -1.08
SPTAN1-215ENST00000628867 CNTN3Q9P232 1028 aa8.29□□□□□ -1.08
SPTAN1-215ENST00000628867 HSFX1Q9UBD0 423 aa8.29□□□□□ -1.08
SPTAN1-215ENST00000628867 SLC6A14Q9UN76 642 aa8.29□□□□□ -1.08
SPTAN1-215ENST00000628867 MAGED2Q9UNF1 606 aaPredicted RBP8.29□□□□□ -1.08
SPTAN1-215ENST00000628867 RBM19Q9Y4C8 960 aaKnown RBP8.29□□□□□ -1.08
SPTAN1-215ENST00000628867 GPSM3Q9Y4H4 160 aa8.29□□□□□ -1.08
SPTAN1-215ENST00000628867 IGF2RP11717 2491 aa8.28□□□□□ -1.08
SPTAN1-215ENST00000628867 MTMR11A4FU01 709 aa8.28□□□□□ -1.08
SPTAN1-215ENST00000628867 MYMKA6NI61 221 aa8.28□□□□□ -1.08
SPTAN1-215ENST00000628867 M0QZQ0 153 aa8.28□□□□□ -1.08
SPTAN1-215ENST00000628867 CLDN3O15551 220 aa8.28□□□□□ -1.08
SPTAN1-215ENST00000628867 MED24O75448 989 aa8.28□□□□□ -1.08
SPTAN1-215ENST00000628867 REC8O95072 547 aa8.28□□□□□ -1.08
SPTAN1-215ENST00000628867 SPATA31C1P0DKV0 1188 aa8.28□□□□□ -1.08
SPTAN1-215ENST00000628867 ODC1P11926 461 aa8.28□□□□□ -1.08
SPTAN1-215ENST00000628867 TYMPP19971 482 aa8.28□□□□□ -1.08
SPTAN1-215ENST00000628867 MCM7P33993 719 aa8.28□□□□□ -1.08
SPTAN1-215ENST00000628867 CDR1P51861 262 aa8.28□□□□□ -1.08
SPTAN1-215ENST00000628867 SMTNP53814 917 aa8.28□□□□□ -1.08
SPTAN1-215ENST00000628867 SPAG1Q07617 926 aa8.28□□□□□ -1.08
SPTAN1-215ENST00000628867 TRIP6Q15654 476 aaKnown RBP8.28□□□□□ -1.08
SPTAN1-215ENST00000628867 DUOXA1Q1HG43 343 aa8.28□□□□□ -1.08
SPTAN1-215ENST00000628867 SLC39A12Q504Y0 691 aa8.28□□□□□ -1.08
SPTAN1-215ENST00000628867 LYSMD4Q5XG99 296 aa8.28□□□□□ -1.08
SPTAN1-215ENST00000628867 HAUS3Q68CZ6 603 aa8.28□□□□□ -1.08
SPTAN1-215ENST00000628867 TXNDC8Q6A555 127 aa8.28□□□□□ -1.08
SPTAN1-215ENST00000628867 GLIS3Q8NEA6 775 aa8.28□□□□□ -1.08
SPTAN1-215ENST00000628867 WHAMMQ8TF30 809 aa8.28□□□□□ -1.08
SPTAN1-215ENST00000628867 FAM212AQ96EL1 285 aa8.28□□□□□ -1.08
SPTAN1-215ENST00000628867 BICD1Q96G01 975 aa8.28□□□□□ -1.08
SPTAN1-215ENST00000628867 CNOT6LQ96LI5 555 aaKnown RBP8.28□□□□□ -1.08
SPTAN1-215ENST00000628867 PNMA5Q96PV4 448 aa8.28□□□□□ -1.08
SPTAN1-215ENST00000628867 POLR3CQ9BUI4 534 aaPredicted RBP8.28□□□□□ -1.08
SPTAN1-215ENST00000628867 BHMT2Q9H2M3 363 aa8.28□□□□□ -1.08
SPTAN1-215ENST00000628867 TMEM134Q9H6X4 195 aa8.28□□□□□ -1.08
SPTAN1-215ENST00000628867 PLEKHA5Q9HAU0 1116 aa8.28□□□□□ -1.08
SPTAN1-215ENST00000628867 TRPC7Q9HCX4 862 aa8.28□□□□□ -1.08
SPTAN1-215ENST00000628867 HPS4Q9NQG7 708 aa8.28□□□□□ -1.08
SPTAN1-215ENST00000628867 ORC3Q9UBD5 711 aaPredicted RBP8.28□□□□□ -1.08
SPTAN1-215ENST00000628867 UBQLN1Q9UMX0 589 aaKnown RBP8.28□□□□□ -1.08
SPTAN1-215ENST00000628867 APOBEC2Q9Y235 224 aaKnown RBP8.28□□□□□ -1.08
SPTAN1-215ENST00000628867 VWA8A3KMH1 1905 aa8.28□□□□□ -1.08
SPTAN1-215ENST00000628867 SPAG17Q6Q759 2223 aa8.27□□□□□ -1.08
SPTAN1-215ENST00000628867 OTOL1A6NHN0 477 aaPredicted RBP8.27□□□□□ -1.09
SPTAN1-215ENST00000628867 AP5Z1O43299 807 aa8.27□□□□□ -1.09
SPTAN1-215ENST00000628867 EDN1P05305 212 aa8.27□□□□□ -1.09
SPTAN1-215ENST00000628867 USP17L7P0C7H9 530 aa8.27□□□□□ -1.09
SPTAN1-215ENST00000628867 BCKDHBP21953 392 aa8.27□□□□□ -1.09
SPTAN1-215ENST00000628867 PAX3P23760 479 aa8.27□□□□□ -1.09
SPTAN1-215ENST00000628867 RPA1P27694 616 aa8.27□□□□□ -1.09
SPTAN1-215ENST00000628867 CCT6AP40227 531 aaKnown RBP8.27□□□□□ -1.09
SPTAN1-215ENST00000628867 NPTX2P47972 431 aa8.27□□□□□ -1.09
SPTAN1-215ENST00000628867 PPP2R3AQ06190 1150 aa8.27□□□□□ -1.09
SPTAN1-215ENST00000628867 SMARCB1Q12824 385 aa8.27□□□□□ -1.09
SPTAN1-215ENST00000628867 SEMA3BQ13214 749 aa8.27□□□□□ -1.09
SPTAN1-215ENST00000628867 NR5A1Q13285 461 aa8.27□□□□□ -1.09
SPTAN1-215ENST00000628867 MTF1Q14872 753 aa8.27□□□□□ -1.09
SPTAN1-215ENST00000628867 SEZ6Q53EL9 994 aa8.27□□□□□ -1.09
SPTAN1-215ENST00000628867 MON1AQ86VX9 555 aa8.27□□□□□ -1.09
SPTAN1-215ENST00000628867 DCP1BQ8IZD4 617 aaKnown RBP8.27□□□□□ -1.09
SPTAN1-215ENST00000628867 KRI1Q8N9T8 703 aaKnown RBP8.27□□□□□ -1.09
SPTAN1-215ENST00000628867 C2orf15Q8WU43 125 aaKnown RBP8.27□□□□□ -1.09
SPTAN1-215ENST00000628867 RLN3Q8WXF3 142 aa8.27□□□□□ -1.09
SPTAN1-215ENST00000628867 USP13Q92995 863 aaPredicted RBP8.27□□□□□ -1.09
SPTAN1-215ENST00000628867 KIF2CQ99661 725 aa8.27□□□□□ -1.09
SPTAN1-215ENST00000628867 CRISPLD1Q9H336 500 aa8.27□□□□□ -1.09
SPTAN1-215ENST00000628867 GJB4Q9NTQ9 266 aa8.27□□□□□ -1.09
SPTAN1-215ENST00000628867 PDRG1Q9NUG6 133 aa8.27□□□□□ -1.09
SPTAN1-215ENST00000628867 ABI2Q9NYB9 513 aaPredicted RBP8.27□□□□□ -1.09
SPTAN1-215ENST00000628867 UXTQ9UBK9 157 aaPredicted RBP8.27□□□□□ -1.09
SPTAN1-215ENST00000628867 TUBGCP4Q9UGJ1 667 aa8.27□□□□□ -1.09
SPTAN1-215ENST00000628867 MBD1Q9UIS9 605 aaPredicted RBP8.27□□□□□ -1.09
SPTAN1-215ENST00000628867 DSEQ9UL01 958 aa8.27□□□□□ -1.09
SPTAN1-215ENST00000628867 CCL26Q9Y258 94 aa8.27□□□□□ -1.09
SPTAN1-215ENST00000628867 TRAV19A0A0A6YYK7 116 aa8.26□□□□□ -1.09
SPTAN1-215ENST00000628867 FAM221BA6H8Z2 402 aa8.26□□□□□ -1.09
SPTAN1-215ENST00000628867 FAM205CA6NFA0 338 aa8.26□□□□□ -1.09
SPTAN1-215ENST00000628867 UPK3BL1B0FP48 263 aa8.26□□□□□ -1.09
SPTAN1-215ENST00000628867 UPK3BL2E5RIL1 263 aa8.26□□□□□ -1.09
SPTAN1-215ENST00000628867 PRPF40AO75400 957 aaKnown RBP8.26□□□□□ -1.09
SPTAN1-215ENST00000628867 TOM1L1O75674 476 aa8.26□□□□□ -1.09
SPTAN1-215ENST00000628867 LARGE1O95461 756 aa8.26□□□□□ -1.09
SPTAN1-215ENST00000628867 NFATC1O95644 943 aa8.26□□□□□ -1.09
SPTAN1-215ENST00000628867 CKMP06732 381 aa8.26□□□□□ -1.09
SPTAN1-215ENST00000628867 CLTAP09496 248 aa8.26□□□□□ -1.09
SPTAN1-215ENST00000628867 CSH1P0DML2 217 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms