RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 PPP1R12AO14974 1030 aaPredicted RBP7.64□□□□□ -1.19
CSDE1-218ENST00000610726 MCF2P10911 925 aa7.64□□□□□ -1.19
CSDE1-218ENST00000610726 SERPINB6P35237 376 aa7.64□□□□□ -1.19
CSDE1-218ENST00000610726 ACADSBP45954 432 aa7.64□□□□□ -1.19
CSDE1-218ENST00000610726 NDST1P52848 882 aa7.64□□□□□ -1.19
CSDE1-218ENST00000610726 GCNT1Q02742 428 aa7.64□□□□□ -1.19
CSDE1-218ENST00000610726 MEA1Q16626 185 aa7.64□□□□□ -1.19
CSDE1-218ENST00000610726 FAM133BQ5BKY9 247 aaKnown RBP7.64□□□□□ -1.19
CSDE1-218ENST00000610726 SLC27A1Q6PCB7 646 aa7.64□□□□□ -1.19
CSDE1-218ENST00000610726 WDR59Q6PJI9 974 aa7.64□□□□□ -1.19
CSDE1-218ENST00000610726 CEP120Q8N960 986 aa7.64□□□□□ -1.19
CSDE1-218ENST00000610726 ATP6V1E2Q96A05 226 aa7.64□□□□□ -1.19
CSDE1-218ENST00000610726 ATP6V1G3Q96LB4 118 aa7.64□□□□□ -1.19
CSDE1-218ENST00000610726 TACO1Q9BSH4 297 aaKnown RBP7.64□□□□□ -1.19
CSDE1-218ENST00000610726 PITPNM3Q9BZ71 974 aa7.64□□□□□ -1.19
CSDE1-218ENST00000610726 RSAD1Q9HA92 442 aa7.64□□□□□ -1.19
CSDE1-218ENST00000610726 NEU2Q9Y3R4 380 aa7.64□□□□□ -1.19
CSDE1-218ENST00000610726 IGLV3-22A0A075B6J6 115 aa7.64□□□□□ -1.19
CSDE1-218ENST00000610726 BTBD19C9JJ37 291 aa7.64□□□□□ -1.19
CSDE1-218ENST00000610726 SPAG7O75391 227 aa7.64□□□□□ -1.19
CSDE1-218ENST00000610726 GJB6O95452 261 aa7.64□□□□□ -1.19
CSDE1-218ENST00000610726 ALDH1A1P00352 501 aa7.64□□□□□ -1.19
CSDE1-218ENST00000610726 COILP38432 576 aaPredicted RBP7.64□□□□□ -1.19
CSDE1-218ENST00000610726 CLK2P49760 499 aaKnown RBP7.64□□□□□ -1.19
CSDE1-218ENST00000610726 BIRC2Q13490 618 aa7.64□□□□□ -1.19
CSDE1-218ENST00000610726 LONRF1Q17RB8 773 aa7.64□□□□□ -1.19
CSDE1-218ENST00000610726 EFHC1Q5JVL4 640 aa7.64□□□□□ -1.19
CSDE1-218ENST00000610726 HYIQ5T013 277 aa7.64□□□□□ -1.19
CSDE1-218ENST00000610726 FAXCQ5TGI0 409 aa7.64□□□□□ -1.19
CSDE1-218ENST00000610726 JADE1Q6IE81 842 aa7.64□□□□□ -1.19
CSDE1-218ENST00000610726 ADGRF2Q8IZF7 708 aa7.64□□□□□ -1.19
CSDE1-218ENST00000610726 FAM71DQ8N9W8 422 aa7.64□□□□□ -1.19
CSDE1-218ENST00000610726 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.64□□□□□ -1.19
CSDE1-218ENST00000610726 CLEC4DQ8WXI8 215 aa7.64□□□□□ -1.19
CSDE1-218ENST00000610726 PABPC5Q96DU9 382 aaKnown RBP7.64□□□□□ -1.19
CSDE1-218ENST00000610726 WNK4Q96J92 1243 aa7.64□□□□□ -1.19
CSDE1-218ENST00000610726 VPS39Q96JC1 886 aa7.64□□□□□ -1.19
CSDE1-218ENST00000610726 PLIN4Q96Q06 1357 aa7.63□□□□□ -1.19
CSDE1-218ENST00000610726 RGPD1P0DJD0 1748 aa7.63□□□□□ -1.19
CSDE1-218ENST00000610726 B4GALT5O43286 388 aa7.63□□□□□ -1.19
CSDE1-218ENST00000610726 ITIH2P19823 946 aa7.63□□□□□ -1.19
CSDE1-218ENST00000610726 TNFSF9P41273 254 aa7.63□□□□□ -1.19
CSDE1-218ENST00000610726 PPP2R2AP63151 447 aa7.63□□□□□ -1.19
CSDE1-218ENST00000610726 TMPRSS15P98073 1019 aa7.63□□□□□ -1.19
CSDE1-218ENST00000610726 GUCY1A3Q02108 690 aa7.63□□□□□ -1.19
CSDE1-218ENST00000610726 SPARCL1Q14515 664 aa7.63□□□□□ -1.19
CSDE1-218ENST00000610726 CLEC16AQ2KHT3 1053 aa7.63□□□□□ -1.19
CSDE1-218ENST00000610726 KLHL38Q2WGJ6 581 aa7.63□□□□□ -1.19
CSDE1-218ENST00000610726 BOLA3Q53S33 107 aa7.63□□□□□ -1.19
CSDE1-218ENST00000610726 RGMBQ6NW40 437 aa7.63□□□□□ -1.19
CSDE1-218ENST00000610726 FAM131BQ86XD5 332 aa7.63□□□□□ -1.19
CSDE1-218ENST00000610726 SOCS4Q8WXH5 440 aa7.63□□□□□ -1.19
CSDE1-218ENST00000610726 ANKRD7Q92527 254 aa7.63□□□□□ -1.19
CSDE1-218ENST00000610726 IFT43Q96FT9 208 aa7.63□□□□□ -1.19
CSDE1-218ENST00000610726 MTG1Q9BT17 334 aaPredicted RBP7.63□□□□□ -1.19
CSDE1-218ENST00000610726 TLR10Q9BXR5 811 aa7.63□□□□□ -1.19
CSDE1-218ENST00000610726 TRPC7Q9HCX4 862 aa7.63□□□□□ -1.19
CSDE1-218ENST00000610726 TAS2R14Q9NYV8 317 aa7.63□□□□□ -1.19
CSDE1-218ENST00000610726 PCDHB7Q9Y5E2 793 aa7.63□□□□□ -1.19
CSDE1-218ENST00000610726 NFASCO94856 1347 aa7.63□□□□□ -1.19
CSDE1-218ENST00000610726 EEF2KO00418 725 aaKnown RBP7.63□□□□□ -1.19
CSDE1-218ENST00000610726 PRRG1O14668 218 aa7.63□□□□□ -1.19
CSDE1-218ENST00000610726 FARP2O94887 1054 aaPredicted RBP7.63□□□□□ -1.19
CSDE1-218ENST00000610726 EIF4BP23588 611 aaKnown RBP7.63□□□□□ -1.19
CSDE1-218ENST00000610726 EPHB2P29323 1055 aa7.63□□□□□ -1.19
CSDE1-218ENST00000610726 ITGA8P53708 1063 aa7.63□□□□□ -1.19
CSDE1-218ENST00000610726 EEF1DP3Q658K8 133 aa7.63□□□□□ -1.19
CSDE1-218ENST00000610726 TAF2Q6P1X5 1199 aa7.63□□□□□ -1.19
CSDE1-218ENST00000610726 DCP1BQ8IZD4 617 aaKnown RBP7.63□□□□□ -1.19
CSDE1-218ENST00000610726 MCOLN2Q8IZK6 566 aa7.63□□□□□ -1.19
CSDE1-218ENST00000610726 ELMOD1Q8N336 334 aa7.63□□□□□ -1.19
CSDE1-218ENST00000610726 ARRDC4Q8NCT1 418 aa7.63□□□□□ -1.19
CSDE1-218ENST00000610726 MAML1Q92585 1016 aa7.63□□□□□ -1.19
CSDE1-218ENST00000610726 ARHGEF26Q96DR7 871 aa7.63□□□□□ -1.19
CSDE1-218ENST00000610726 ASB7Q9H672 318 aa7.63□□□□□ -1.19
CSDE1-218ENST00000610726 PIDD1Q9HB75 910 aa7.63□□□□□ -1.19
CSDE1-218ENST00000610726 MORC2Q9Y6X9 1032 aaPredicted RBP7.63□□□□□ -1.19
CSDE1-218ENST00000610726 A0A0G2JND7 137 aa7.63□□□□□ -1.19
CSDE1-218ENST00000610726 FZD9O00144 591 aa7.63□□□□□ -1.19
CSDE1-218ENST00000610726 MAFO75444 373 aaPredicted RBP7.63□□□□□ -1.19
CSDE1-218ENST00000610726 RECQL4O94761 1208 aa7.63□□□□□ -1.19
CSDE1-218ENST00000610726 ALDH7A1P49419 539 aaKnown RBP7.63□□□□□ -1.19
CSDE1-218ENST00000610726 ACCSLQ4AC99 568 aa7.63□□□□□ -1.19
CSDE1-218ENST00000610726 MEI1Q5TIA1 1274 aa7.63□□□□□ -1.19
CSDE1-218ENST00000610726 ITPRIPL1Q6GPH6 555 aa7.63□□□□□ -1.19
CSDE1-218ENST00000610726 ABHD15Q6UXT9 468 aa7.63□□□□□ -1.19
CSDE1-218ENST00000610726 DEFB128Q7Z7B8 93 aa7.63□□□□□ -1.19
CSDE1-218ENST00000610726 MIB1Q86YT6 1006 aa7.63□□□□□ -1.19
CSDE1-218ENST00000610726 TRIM42Q8IWZ5 723 aa7.63□□□□□ -1.19
CSDE1-218ENST00000610726 OR5B17Q8NGF7 314 aa7.63□□□□□ -1.19
CSDE1-218ENST00000610726 RXFP2Q8WXD0 754 aa7.63□□□□□ -1.19
CSDE1-218ENST00000610726 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.63□□□□□ -1.194e-6■■□□□ 14.1
CSDE1-218ENST00000610726 TRIM62Q9BVG3 475 aa7.63□□□□□ -1.19
CSDE1-218ENST00000610726 ALG13Q9NP73 1137 aaKnown RBP7.63□□□□□ -1.19
CSDE1-218ENST00000610726 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.63□□□□□ -1.191e-8■□□□□ 9.6
CSDE1-218ENST00000610726 TSPAN16Q9UKR8 245 aa7.63□□□□□ -1.19
CSDE1-218ENST00000610726 CHMP2BQ9UQN3 213 aa7.63□□□□□ -1.19
CSDE1-218ENST00000610726 SNCAIPQ9Y6H5 919 aa7.63□□□□□ -1.19
CSDE1-218ENST00000610726 ZSCAN5CA6NGD5 496 aaPredicted RBP7.62□□□□□ -1.19
CSDE1-218ENST00000610726 PROSCO94903 275 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms