RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 SOX4Q06945 474 aaPredicted RBP10.25□□□□□ -0.77
BRCA1-226ENST00000591534 TWF1Q12792 350 aa10.25□□□□□ -0.77
BRCA1-226ENST00000591534 FOXC1Q12948 553 aa10.25□□□□□ -0.77
BRCA1-226ENST00000591534 LRRC32Q14392 662 aa10.25□□□□□ -0.77
BRCA1-226ENST00000591534 GRM2Q14416 872 aa10.25□□□□□ -0.77
BRCA1-226ENST00000591534 ZRSR1Q15695 479 aaKnown RBP10.25□□□□□ -0.77
BRCA1-226ENST00000591534 ECM1Q16610 540 aa10.25□□□□□ -0.77
BRCA1-226ENST00000591534 RSPO4Q2I0M5 234 aaPredicted RBP10.25□□□□□ -0.77
BRCA1-226ENST00000591534 RILPL1Q5EBL4 403 aa10.25□□□□□ -0.77
BRCA1-226ENST00000591534 ARMCX5Q6P1M9 558 aa10.25□□□□□ -0.77
BRCA1-226ENST00000591534 C1orf186Q6ZWK4 172 aa10.25□□□□□ -0.77
BRCA1-226ENST00000591534 HAUS6Q7Z4H7 955 aa10.25□□□□□ -0.77
BRCA1-226ENST00000591534 MFSD6LQ8IWD5 586 aa10.25□□□□□ -0.77
BRCA1-226ENST00000591534 DCLK2Q8N568 766 aa10.25□□□□□ -0.77
BRCA1-226ENST00000591534 C4orf32Q8N8J7 132 aa10.25□□□□□ -0.77
BRCA1-226ENST00000591534 CEP120Q8N960 986 aa10.25□□□□□ -0.77
BRCA1-226ENST00000591534 NELL1Q92832 810 aa10.25□□□□□ -0.77
BRCA1-226ENST00000591534 BICD1Q96G01 975 aa10.25□□□□□ -0.77
BRCA1-226ENST00000591534 ZMAT2Q96NC0 199 aaKnown RBP10.25□□□□□ -0.77
BRCA1-226ENST00000591534 PLA2G2FQ9BZM2 168 aa10.25□□□□□ -0.77
BRCA1-226ENST00000591534 CHRDQ9H2X0 955 aa10.25□□□□□ -0.77
BRCA1-226ENST00000591534 C8orf33Q9H7E9 229 aaPredicted RBP10.25□□□□□ -0.77
BRCA1-226ENST00000591534 TRPV4Q9HBA0 871 aa10.25□□□□□ -0.77
BRCA1-226ENST00000591534 ZNF334Q9HCZ1 680 aaPredicted RBP10.25□□□□□ -0.77
BRCA1-226ENST00000591534 PRMT8Q9NR22 394 aaPredicted RBP10.25□□□□□ -0.77
BRCA1-226ENST00000591534 UBQLN1Q9UMX0 589 aaKnown RBP10.25□□□□□ -0.77
BRCA1-226ENST00000591534 NDRG2Q9UN36 371 aaKnown RBP10.25□□□□□ -0.77
BRCA1-226ENST00000591534 ASB3Q9Y575 518 aa10.25□□□□□ -0.77
BRCA1-226ENST00000591534 PIAS3Q9Y6X2 628 aa10.25□□□□□ -0.77
BRCA1-226ENST00000591534 MTCL1Q9Y4B5 1905 aaKnown RBP10.25□□□□□ -0.77
BRCA1-226ENST00000591534 SLC26A4O43511 780 aa10.24□□□□□ -0.77
BRCA1-226ENST00000591534 LILRB5O75023 590 aa10.24□□□□□ -0.77
BRCA1-226ENST00000591534 OAZ2O95190 189 aa10.24□□□□□ -0.77
BRCA1-226ENST00000591534 SEC24AO95486 1093 aa10.24□□□□□ -0.77
BRCA1-226ENST00000591534 CNR2P34972 360 aa10.24□□□□□ -0.77
BRCA1-226ENST00000591534 CXCL12P48061 93 aa10.24□□□□□ -0.77
BRCA1-226ENST00000591534 EPHA5P54756 1037 aa10.24□□□□□ -0.77
BRCA1-226ENST00000591534 PPP2R3AQ06190 1150 aa10.24□□□□□ -0.77
BRCA1-226ENST00000591534 MCL1Q07820 350 aa10.24□□□□□ -0.77
BRCA1-226ENST00000591534 MTAPQ13126 283 aa10.24□□□□□ -0.77
BRCA1-226ENST00000591534 PTPAQ15257 358 aa10.24□□□□□ -0.77
BRCA1-226ENST00000591534 ARHGAP15Q53QZ3 475 aa10.24□□□□□ -0.77
BRCA1-226ENST00000591534 PPP1R26Q5T8A7 1209 aaPredicted RBP10.24□□□□□ -0.77
BRCA1-226ENST00000591534 DSTYKQ6XUX3 929 aa10.24□□□□□ -0.77
BRCA1-226ENST00000591534 ITIH5Q86UX2 942 aa10.24□□□□□ -0.77
BRCA1-226ENST00000591534 MAP4K3Q8IVH8 894 aa10.24□□□□□ -0.77
BRCA1-226ENST00000591534 CD302Q8IX05 232 aa10.24□□□□□ -0.77
BRCA1-226ENST00000591534 ZSCAN18Q8TBC5 510 aaPredicted RBP10.24□□□□□ -0.77
BRCA1-226ENST00000591534 C18orf25Q96B23 403 aaPredicted RBP10.24□□□□□ -0.77
BRCA1-226ENST00000591534 TCEAL4Q96EI5 215 aa10.24□□□□□ -0.77
BRCA1-226ENST00000591534 LMAN1LQ9HAT1 526 aa10.24□□□□□ -0.77
BRCA1-226ENST00000591534 USP18Q9UMW8 372 aa10.24□□□□□ -0.77
BRCA1-226ENST00000591534 EP300Q09472 2414 aaPredicted RBP10.24□□□□□ -0.77
BRCA1-226ENST00000591534 DCHS1Q96JQ0 3298 aa10.24□□□□□ -0.77
BRCA1-226ENST00000591534 M0QZQ0 153 aa10.23□□□□□ -0.77
BRCA1-226ENST00000591534 CHADO15335 359 aa10.23□□□□□ -0.77
BRCA1-226ENST00000591534 LRP3O75074 770 aa10.23□□□□□ -0.77
BRCA1-226ENST00000591534 ADH1CP00326 375 aa10.23□□□□□ -0.77
BRCA1-226ENST00000591534 MAPTP10636 758 aaKnown RBP10.23□□□□□ -0.77
BRCA1-226ENST00000591534 FCARP24071 287 aa10.23□□□□□ -0.77
BRCA1-226ENST00000591534 IGFBP6P24592 240 aaPredicted RBP10.23□□□□□ -0.77
BRCA1-226ENST00000591534 GJB2P29033 226 aa10.23□□□□□ -0.77
BRCA1-226ENST00000591534 LRPAP1P30533 357 aa10.23□□□□□ -0.77
BRCA1-226ENST00000591534 LIG4P49917 911 aa10.23□□□□□ -0.77
BRCA1-226ENST00000591534 KPNA1P52294 538 aaPredicted RBP10.23□□□□□ -0.77
BRCA1-226ENST00000591534 GPR17Q13304 367 aa10.23□□□□□ -0.77
BRCA1-226ENST00000591534 MYBPC2Q14324 1141 aa10.23□□□□□ -0.77
BRCA1-226ENST00000591534 VEPH1Q14D04 833 aa10.23□□□□□ -0.77
BRCA1-226ENST00000591534 SLC10A6Q3KNW5 377 aa10.23□□□□□ -0.77
BRCA1-226ENST00000591534 DGKKQ5KSL6 1271 aa10.23□□□□□ -0.77
BRCA1-226ENST00000591534 ATL3Q6DD88 541 aa10.23□□□□□ -0.77
BRCA1-226ENST00000591534 MCTP1Q6DN14 999 aa10.23□□□□□ -0.77
BRCA1-226ENST00000591534 LAIR1Q6GTX8 287 aa10.23□□□□□ -0.77
BRCA1-226ENST00000591534 VITQ6UXI7 678 aa10.23□□□□□ -0.77
BRCA1-226ENST00000591534 DAW1Q8N136 415 aa10.23□□□□□ -0.77
BRCA1-226ENST00000591534 SYT2Q8N9I0 419 aaPredicted RBP10.23□□□□□ -0.77
BRCA1-226ENST00000591534 TMEM161BQ8NDZ6 487 aa10.23□□□□□ -0.77
BRCA1-226ENST00000591534 BEST2Q8NFU1 509 aa10.23□□□□□ -0.77
BRCA1-226ENST00000591534 GCNAQ96QF7 691 aa10.23□□□□□ -0.77
BRCA1-226ENST00000591534 RTKNQ9BST9 563 aa10.23□□□□□ -0.77
BRCA1-226ENST00000591534 RUSC1Q9BVN2 902 aa10.23□□□□□ -0.77
BRCA1-226ENST00000591534 IRX2Q9BZI1 471 aaPredicted RBP10.23□□□□□ -0.77
BRCA1-226ENST00000591534 THG1LQ9NWX6 298 aaKnown RBP10.23□□□□□ -0.77
BRCA1-226ENST00000591534 HSFX1Q9UBD0 423 aa10.23□□□□□ -0.77
BRCA1-226ENST00000591534 ZMYM5Q9UJ78 669 aa10.23□□□□□ -0.77
BRCA1-226ENST00000591534 DSEQ9UL01 958 aa10.23□□□□□ -0.77
BRCA1-226ENST00000591534 PCDHB6Q9Y5E3 794 aa10.23□□□□□ -0.77
BRCA1-226ENST00000591534 DOCK8Q8NF50 2099 aa10.22□□□□□ -0.77
BRCA1-226ENST00000591534 DMXL1Q9Y485 3027 aa10.22□□□□□ -0.77
BRCA1-226ENST00000591534 MED19A0JLT2 244 aaPredicted RBP10.22□□□□□ -0.77
BRCA1-226ENST00000591534 HEPACAM2A8MVW5 462 aa10.22□□□□□ -0.77
BRCA1-226ENST00000591534 H3BQV1 296 aa10.22□□□□□ -0.77
BRCA1-226ENST00000591534 ABLIM1O14639 778 aa10.22□□□□□ -0.77
BRCA1-226ENST00000591534 HNRNPDLO14979 420 aaKnown RBP10.22□□□□□ -0.77
BRCA1-226ENST00000591534 PLA2G4BP0C869 781 aa10.22□□□□□ -0.77
BRCA1-226ENST00000591534 ODC1P11926 461 aa10.22□□□□□ -0.77
BRCA1-226ENST00000591534 TYMPP19971 482 aa10.22□□□□□ -0.77
BRCA1-226ENST00000591534 CCNE1P24864 410 aa10.22□□□□□ -0.77
BRCA1-226ENST00000591534 TUFMP49411 452 aaKnown RBP10.22□□□□□ -0.77
BRCA1-226ENST00000591534 SMARCB1Q12824 385 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms