RNA–Protein interactions for RNA: ENST00000588344.2

CIRBP-218, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 370 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-218ENST00000588344 RHOBTB2Q9BYZ6 727 aa9.68□□□□□ -0.86
CIRBP-218ENST00000588344 APOBEC3GQ9HC16 384 aaKnown RBP9.68□□□□□ -0.86
CIRBP-218ENST00000588344 ABCB6Q9NP58 842 aa9.68□□□□□ -0.86
CIRBP-218ENST00000588344 UBE2TQ9NPD8 197 aaPredicted RBP9.68□□□□□ -0.86
CIRBP-218ENST00000588344 PLCB1Q9NQ66 1216 aa9.68□□□□□ -0.86
CIRBP-218ENST00000588344 CISHQ9NSE2 258 aa9.68□□□□□ -0.86
CIRBP-218ENST00000588344 TAB2Q9NYJ8 693 aa9.68□□□□□ -0.86
CIRBP-218ENST00000588344 POLIQ9UNA4 740 aa9.68□□□□□ -0.86
CIRBP-218ENST00000588344 HCFC2Q9Y5Z7 792 aa9.68□□□□□ -0.86
CIRBP-218ENST00000588344 SZT2Q5T011 3432 aa9.68□□□□□ -0.86
CIRBP-218ENST00000588344 ATP8B3O60423 1300 aa9.67□□□□□ -0.86
CIRBP-218ENST00000588344 A0A1W2PQC6 194 aa9.67□□□□□ -0.86
CIRBP-218ENST00000588344 CBFA2T2O43439 604 aa9.67□□□□□ -0.86
CIRBP-218ENST00000588344 PDGFRBP09619 1106 aa9.67□□□□□ -0.86
CIRBP-218ENST00000588344 HNRNPA1P09651 372 aaKnown RBP eCLIP9.67□□□□□ -0.86
CIRBP-218ENST00000588344 WEE2P0C1S8 567 aa9.67□□□□□ -0.86
CIRBP-218ENST00000588344 ATP1A3P13637 1013 aa9.67□□□□□ -0.86
CIRBP-218ENST00000588344 PTPN1P18031 435 aaKnown RBP9.67□□□□□ -0.86
CIRBP-218ENST00000588344 RPL17P18621 184 aaKnown RBP9.67□□□□□ -0.86
CIRBP-218ENST00000588344 SLC9A1P19634 815 aa9.67□□□□□ -0.86
CIRBP-218ENST00000588344 LMO2P25791 158 aa9.67□□□□□ -0.86
CIRBP-218ENST00000588344 HOXA9P31269 272 aa9.67□□□□□ -0.86
CIRBP-218ENST00000588344 CDH8P55286 799 aa9.67□□□□□ -0.86
CIRBP-218ENST00000588344 ARPP19P56211 112 aa9.67□□□□□ -0.86
CIRBP-218ENST00000588344 UBASH3AP57075 661 aa9.67□□□□□ -0.86
CIRBP-218ENST00000588344 FANCCQ00597 558 aa9.67□□□□□ -0.86
CIRBP-218ENST00000588344 ROR1Q01973 937 aa9.67□□□□□ -0.86
CIRBP-218ENST00000588344 PLD1Q13393 1074 aa9.67□□□□□ -0.86
CIRBP-218ENST00000588344 NR1I3Q14994 352 aa9.67□□□□□ -0.86
CIRBP-218ENST00000588344 SKIV2LQ15477 1246 aaKnown RBP9.67□□□□□ -0.86
CIRBP-218ENST00000588344 CFAP221Q4G0U5 840 aa9.67□□□□□ -0.86
CIRBP-218ENST00000588344 INTS6LQ5JSJ4 861 aaKnown RBP9.67□□□□□ -0.86
CIRBP-218ENST00000588344 LIN9Q5TKA1 542 aa9.67□□□□□ -0.86
CIRBP-218ENST00000588344 SPOPLQ6IQ16 392 aa9.67□□□□□ -0.86
CIRBP-218ENST00000588344 APTXQ7Z2E3 356 aaKnown RBP9.67□□□□□ -0.86
CIRBP-218ENST00000588344 ADGRD2Q7Z7M1 963 aa9.67□□□□□ -0.86
CIRBP-218ENST00000588344 PALB2Q86YC2 1186 aa9.67□□□□□ -0.86
CIRBP-218ENST00000588344 B3GALNT2Q8NCR0 500 aa9.67□□□□□ -0.86
CIRBP-218ENST00000588344 KREMEN2Q8NCW0 462 aa9.67□□□□□ -0.86
CIRBP-218ENST00000588344 OR10T2Q8NGX3 314 aa9.67□□□□□ -0.86
CIRBP-218ENST00000588344 MYCBPAPQ8TBZ2 947 aa9.67□□□□□ -0.86
CIRBP-218ENST00000588344 HLA-CQ95604 372 aa9.67□□□□□ -0.86
CIRBP-218ENST00000588344 IQCDQ96DY2 449 aa9.67□□□□□ -0.86
CIRBP-218ENST00000588344 TMEM176AQ96HP8 235 aa9.67□□□□□ -0.86
CIRBP-218ENST00000588344 RTP3Q9BQQ7 232 aa9.67□□□□□ -0.86
CIRBP-218ENST00000588344 MRPL45Q9BRJ2 306 aaKnown RBP9.67□□□□□ -0.86
CIRBP-218ENST00000588344 IGFLR1Q9H665 355 aa9.67□□□□□ -0.86
CIRBP-218ENST00000588344 SMYD3Q9H7B4 428 aa9.67□□□□□ -0.86
CIRBP-218ENST00000588344 RTN4Q9NQC3 1192 aaKnown RBP9.67□□□□□ -0.86
CIRBP-218ENST00000588344 ZDHHC7Q9NXF8 308 aa9.67□□□□□ -0.86
CIRBP-218ENST00000588344 PCDHB5Q9Y5E4 795 aa9.67□□□□□ -0.86
CIRBP-218ENST00000588344 TRANK1O15050 2925 aa9.67□□□□□ -0.86
CIRBP-218ENST00000588344 RALGAPA2Q2PPJ7 1873 aa9.66□□□□□ -0.86
CIRBP-218ENST00000588344 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.66□□□□□ -0.86
CIRBP-218ENST00000588344 A0A1B0GTH6 734 aa9.66□□□□□ -0.86
CIRBP-218ENST00000588344 WDR27A2RRH5 827 aa9.66□□□□□ -0.86
CIRBP-218ENST00000588344 SPDYE4A6NLX3 237 aa9.66□□□□□ -0.86
CIRBP-218ENST00000588344 PRRG1O14668 218 aa9.66□□□□□ -0.86
CIRBP-218ENST00000588344 CILPO75339 1184 aa9.66□□□□□ -0.86
CIRBP-218ENST00000588344 CSPG5O95196 566 aa9.66□□□□□ -0.86
CIRBP-218ENST00000588344 PAPLNO95428 1278 aa9.66□□□□□ -0.86
CIRBP-218ENST00000588344 POU2F2P09086 479 aa9.66□□□□□ -0.86
CIRBP-218ENST00000588344 PAEPP09466 180 aa9.66□□□□□ -0.86
CIRBP-218ENST00000588344 NDST1P52848 882 aa9.66□□□□□ -0.86
CIRBP-218ENST00000588344 BPIFB4P59827 614 aa9.66□□□□□ -0.86
CIRBP-218ENST00000588344 RPL10AP62906 217 aaKnown RBP9.66□□□□□ -0.86
CIRBP-218ENST00000588344 ITIH3Q06033 890 aa9.66□□□□□ -0.86
CIRBP-218ENST00000588344 ADCY1Q08828 1119 aa9.66□□□□□ -0.86
CIRBP-218ENST00000588344 KCNMA1Q12791 1236 aa9.66□□□□□ -0.86
CIRBP-218ENST00000588344 LRMPQ12912 555 aa9.66□□□□□ -0.86
CIRBP-218ENST00000588344 STILQ15468 1287 aa9.66□□□□□ -0.86
CIRBP-218ENST00000588344 AAK1Q2M2I8 961 aa9.66□□□□□ -0.86
CIRBP-218ENST00000588344 PUS10Q3MIT2 529 aaKnown RBP9.66□□□□□ -0.86
CIRBP-218ENST00000588344 SLC39A12Q504Y0 691 aa9.66□□□□□ -0.86
CIRBP-218ENST00000588344 KLHDC7AQ5VTJ3 777 aa9.66□□□□□ -0.86
CIRBP-218ENST00000588344 PHLDB3Q6NSJ2 640 aa9.66□□□□□ -0.86
CIRBP-218ENST00000588344 CES5AQ6NT32 575 aa9.66□□□□□ -0.86
CIRBP-218ENST00000588344 VSTM1Q6UX27 236 aa9.66□□□□□ -0.86
CIRBP-218ENST00000588344 RSPO2Q6UXX9 243 aaPredicted RBP9.66□□□□□ -0.86
CIRBP-218ENST00000588344 SCARA5Q6ZMJ2 495 aa9.66□□□□□ -0.86
CIRBP-218ENST00000588344 SPATA2LQ8IUW3 424 aaPredicted RBP9.66□□□□□ -0.86
CIRBP-218ENST00000588344 CMASQ8NFW8 434 aaPredicted RBP9.66□□□□□ -0.86
CIRBP-218ENST00000588344 NEK11Q8NG66 645 aa9.66□□□□□ -0.86
CIRBP-218ENST00000588344 MAFAQ8NHW3 353 aaPredicted RBP9.66□□□□□ -0.86
CIRBP-218ENST00000588344 PCMTD1Q96MG8 357 aaPredicted RBP9.66□□□□□ -0.86
CIRBP-218ENST00000588344 HEXIM2Q96MH2 286 aaKnown RBP9.66□□□□□ -0.86
CIRBP-218ENST00000588344 PKMYT1Q99640 499 aa9.66□□□□□ -0.86
CIRBP-218ENST00000588344 SYT15Q9BQS2 421 aa9.66□□□□□ -0.86
CIRBP-218ENST00000588344 NUP58Q9BVL2 599 aa9.66□□□□□ -0.86
CIRBP-218ENST00000588344 EDEM3Q9BZQ6 932 aa9.66□□□□□ -0.86
CIRBP-218ENST00000588344 SFXN1Q9H9B4 322 aa9.66□□□□□ -0.86
CIRBP-218ENST00000588344 CYP4F11Q9HBI6 524 aa9.66□□□□□ -0.86
CIRBP-218ENST00000588344 CLDND1Q9NY35 253 aa9.66□□□□□ -0.86
CIRBP-218ENST00000588344 EHD2Q9NZN4 543 aa9.66□□□□□ -0.86
CIRBP-218ENST00000588344 FBXW11Q9UKB1 542 aa9.66□□□□□ -0.86
CIRBP-218ENST00000588344 GTF3C4Q9UKN8 822 aa9.66□□□□□ -0.86
CIRBP-218ENST00000588344 CNTN6Q9UQ52 1028 aa9.66□□□□□ -0.86
CIRBP-218ENST00000588344 FAM50BQ9Y247 325 aa9.66□□□□□ -0.86
CIRBP-218ENST00000588344 ASB3Q9Y575 518 aa9.66□□□□□ -0.86
CIRBP-218ENST00000588344 PCDHGC5Q9Y5F6 944 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms