RNA–Protein interactions for RNA: ENST00000580108.1

DDX42-211, Transcript of DEAD-box helicase 42, humanhuman

TSL 3

Gene DDX42, Length 545 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-211ENST00000580108 PSTPIP2Q9H939 334 aa4.53□□□□□ -1.68
DDX42-211ENST00000580108 GJB4Q9NTQ9 266 aa4.53□□□□□ -1.68
DDX42-211ENST00000580108 SETD4Q9NVD3 440 aa4.53□□□□□ -1.68
DDX42-211ENST00000580108 GULP1Q9UBP9 304 aa4.53□□□□□ -1.68
DDX42-211ENST00000580108 MTUS1Q9ULD2 1270 aa4.53□□□□□ -1.68
DDX42-211ENST00000580108 UBIAD1Q9Y5Z9 338 aa4.53□□□□□ -1.68
DDX42-211ENST00000580108 SLC4A7Q9Y6M7 1214 aa4.53□□□□□ -1.68
DDX42-211ENST00000580108 BRWD1Q9NSI6 2320 aa4.53□□□□□ -1.68
DDX42-211ENST00000580108 COL4A6Q14031 1691 aa4.53□□□□□ -1.68
DDX42-211ENST00000580108 TTC28Q96AY4 2481 aa4.52□□□□□ -1.69
DDX42-211ENST00000580108 SMCO2A6NFE2 343 aa4.52□□□□□ -1.69
DDX42-211ENST00000580108 NOP56O00567 594 aaKnown RBP4.52□□□□□ -1.69
DDX42-211ENST00000580108 FIBPO43427 364 aa4.52□□□□□ -1.69
DDX42-211ENST00000580108 KPNA6O60684 536 aa4.52□□□□□ -1.69
DDX42-211ENST00000580108 CSPG5O95196 566 aa4.52□□□□□ -1.69
DDX42-211ENST00000580108 LARGE1O95461 756 aa4.52□□□□□ -1.69
DDX42-211ENST00000580108 CCNE2O96020 404 aa4.52□□□□□ -1.69
DDX42-211ENST00000580108 EPHX1P07099 455 aa4.52□□□□□ -1.69
DDX42-211ENST00000580108 CALM1P0DP23 149 aa4.52□□□□□ -1.69
DDX42-211ENST00000580108 CALM2P0DP24 149 aa4.52□□□□□ -1.69
DDX42-211ENST00000580108 CALM3P0DP25 149 aa4.52□□□□□ -1.69
DDX42-211ENST00000580108 ATP2A2P16615 1042 aaKnown RBP4.52□□□□□ -1.69
DDX42-211ENST00000580108 ICAM3P32942 547 aa4.52□□□□□ -1.69
DDX42-211ENST00000580108 NT5C2P49902 561 aa4.52□□□□□ -1.69
DDX42-211ENST00000580108 GNAQP50148 359 aa4.52□□□□□ -1.69
DDX42-211ENST00000580108 METAP2P50579 478 aaKnown RBP eCLIP4.52□□□□□ -1.69
DDX42-211ENST00000580108 ADCY7P51828 1080 aa4.52□□□□□ -1.69
DDX42-211ENST00000580108 TAP1Q03518 808 aa4.52□□□□□ -1.69
DDX42-211ENST00000580108 BFSP2Q13515 415 aa4.52□□□□□ -1.69
DDX42-211ENST00000580108 TCEAL1Q15170 157 aa4.52□□□□□ -1.69
DDX42-211ENST00000580108 NTRK3Q16288 839 aa4.52□□□□□ -1.69
DDX42-211ENST00000580108 BLOC1S2Q6QNY1 142 aa4.52□□□□□ -1.69
DDX42-211ENST00000580108 METTL7BQ6UX53 244 aa4.52□□□□□ -1.69
DDX42-211ENST00000580108 SYNE3Q6ZMZ3 975 aa4.52□□□□□ -1.69
DDX42-211ENST00000580108 SERINC5Q86VE9 423 aa4.52□□□□□ -1.69
DDX42-211ENST00000580108 SESTD1Q86VW0 696 aa4.52□□□□□ -1.69
DDX42-211ENST00000580108 ZNF761Q86XN6 746 aaPredicted RBP4.52□□□□□ -1.69
DDX42-211ENST00000580108 HERC6Q8IVU3 1022 aa4.52□□□□□ -1.69
DDX42-211ENST00000580108 LZTR1Q8N653 840 aa4.52□□□□□ -1.69
DDX42-211ENST00000580108 ZNF513Q8N8E2 541 aaPredicted RBP4.52□□□□□ -1.69
DDX42-211ENST00000580108 NETO2Q8NC67 525 aa4.52□□□□□ -1.69
DDX42-211ENST00000580108 DBF4BQ8NFT6 615 aa4.52□□□□□ -1.69
DDX42-211ENST00000580108 GDPD5Q8WTR4 605 aa4.52□□□□□ -1.69
DDX42-211ENST00000580108 LMBR1Q8WVP7 490 aa4.52□□□□□ -1.69
DDX42-211ENST00000580108 ARNTL2Q8WYA1 636 aa4.52□□□□□ -1.69
DDX42-211ENST00000580108 KLHL6Q8WZ60 621 aa4.52□□□□□ -1.69
DDX42-211ENST00000580108 ATP6V0A1Q93050 837 aa4.52□□□□□ -1.69
DDX42-211ENST00000580108 SYT3Q9BQG1 590 aa4.52□□□□□ -1.69
DDX42-211ENST00000580108 LZTS2Q9BRK4 669 aa4.52□□□□□ -1.69
DDX42-211ENST00000580108 SLC26A6Q9BXS9 759 aa4.52□□□□□ -1.69
DDX42-211ENST00000580108 FAM49AQ9H0Q0 323 aaPredicted RBP4.52□□□□□ -1.69
DDX42-211ENST00000580108 TMPRSS5Q9H3S3 457 aa4.52□□□□□ -1.69
DDX42-211ENST00000580108 RIC8AQ9NPQ8 531 aa4.52□□□□□ -1.69
DDX42-211ENST00000580108 VPS54Q9P1Q0 977 aa4.52□□□□□ -1.69
DDX42-211ENST00000580108 CGGBP1Q9UFW8 167 aaPredicted RBP4.52□□□□□ -1.69
DDX42-211ENST00000580108 MSRAQ9UJ68 235 aa4.52□□□□□ -1.69
DDX42-211ENST00000580108 CNOT11Q9UKZ1 510 aaKnown RBP4.52□□□□□ -1.69
DDX42-211ENST00000580108 PLXNA4Q9HCM2 1894 aa4.52□□□□□ -1.69
DDX42-211ENST00000580108 IGLV3-22A0A075B6J6 115 aa4.51□□□□□ -1.69
DDX42-211ENST00000580108 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.51□□□□□ -1.69
DDX42-211ENST00000580108 A0A1W2PQH9 124 aa4.51□□□□□ -1.69
DDX42-211ENST00000580108 C17orf102A2RUQ5 167 aa4.51□□□□□ -1.69
DDX42-211ENST00000580108 TMEM150BA6NC51 233 aa4.51□□□□□ -1.69
DDX42-211ENST00000580108 FAM86B1E9PN63 330 aa4.51□□□□□ -1.69
DDX42-211ENST00000580108 PPFIA4O75335 1185 aa4.51□□□□□ -1.69
DDX42-211ENST00000580108 CHRNA1P02708 482 aa4.51□□□□□ -1.69
DDX42-211ENST00000580108 CXCL10P02778 98 aa4.51□□□□□ -1.69
DDX42-211ENST00000580108 ITGB3P05106 788 aa4.51□□□□□ -1.69
DDX42-211ENST00000580108 C8BP07358 591 aa4.51□□□□□ -1.69
DDX42-211ENST00000580108 FAM86B2P0C5J1 330 aa4.51□□□□□ -1.69
DDX42-211ENST00000580108 SUPT20HL2P0C7V6 817 aa4.51□□□□□ -1.69
DDX42-211ENST00000580108 GHRP10912 638 aa4.51□□□□□ -1.69
DDX42-211ENST00000580108 SCG2P13521 617 aa4.51□□□□□ -1.69
DDX42-211ENST00000580108 SMARCA1P28370 1054 aa4.51□□□□□ -1.69
DDX42-211ENST00000580108 PDIA3P30101 505 aaKnown RBP4.51□□□□□ -1.69
DDX42-211ENST00000580108 HOXC8P31273 242 aa4.51□□□□□ -1.69
DDX42-211ENST00000580108 GATMP50440 423 aa4.51□□□□□ -1.69
DDX42-211ENST00000580108 ACTR2P61160 394 aa4.51□□□□□ -1.69
DDX42-211ENST00000580108 ADAM17P78536 824 aa4.51□□□□□ -1.69
DDX42-211ENST00000580108 TFF2Q03403 129 aa4.51□□□□□ -1.69
DDX42-211ENST00000580108 PPFIA1Q13136 1202 aa4.51□□□□□ -1.69
DDX42-211ENST00000580108 MTMR1Q13613 665 aa4.51□□□□□ -1.69
DDX42-211ENST00000580108 NEDD9Q14511 834 aa4.51□□□□□ -1.69
DDX42-211ENST00000580108 PUM1Q14671 1186 aaKnown RBP eCLIP4.51□□□□□ -1.69
DDX42-211ENST00000580108 RAB30Q15771 203 aa4.51□□□□□ -1.69
DDX42-211ENST00000580108 UGCGQ16739 394 aa4.51□□□□□ -1.69
DDX42-211ENST00000580108 PFKFB3Q16875 520 aaPredicted RBP4.51□□□□□ -1.69
DDX42-211ENST00000580108 GNPTABQ3T906 1256 aa4.51□□□□□ -1.69
DDX42-211ENST00000580108 MARCH8Q5T0T0 291 aa4.51□□□□□ -1.69
DDX42-211ENST00000580108 MBLAC2Q68D91 279 aa4.51□□□□□ -1.69
DDX42-211ENST00000580108 CCDC60Q8IWA6 550 aaPredicted RBP4.51□□□□□ -1.69
DDX42-211ENST00000580108 RPUSD2Q8IZ73 545 aaKnown RBP4.51□□□□□ -1.69
DDX42-211ENST00000580108 MYOCDQ8IZQ8 938 aa4.51□□□□□ -1.69
DDX42-211ENST00000580108 TMTC2Q8N394 836 aa4.51□□□□□ -1.69
DDX42-211ENST00000580108 NECAB1Q8N987 351 aa4.51□□□□□ -1.69
DDX42-211ENST00000580108 AFAP1L1Q8TED9 768 aa4.51□□□□□ -1.69
DDX42-211ENST00000580108 DNAJB3Q8WWF6 145 aa4.51□□□□□ -1.69
DDX42-211ENST00000580108 CPA5Q8WXQ8 436 aa4.51□□□□□ -1.69
DDX42-211ENST00000580108 GPRASP2Q96D09 838 aa4.51□□□□□ -1.69
DDX42-211ENST00000580108 BORCS6Q96GS4 357 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms