RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 NR1H3Q13133 447 aa15.1■□□□□ 0.01
USP44-203ENST00000537435 PIGHQ14442 188 aaPredicted RBP15.1■□□□□ 0.01
USP44-203ENST00000537435 ZNF268Q14587 947 aaPredicted RBP15.1■□□□□ 0.01
USP44-203ENST00000537435 TARBP2Q15633 366 aaKnown RBP15.1■□□□□ 0.01
USP44-203ENST00000537435 WDR72Q3MJ13 1102 aa15.1■□□□□ 0.01
USP44-203ENST00000537435 PPP1R15BQ5SWA1 713 aa15.1■□□□□ 0.01
USP44-203ENST00000537435 RNASEH2BQ5TBB1 312 aaKnown RBP15.1■□□□□ 0.01
USP44-203ENST00000537435 CYP4A22Q5TCH4 519 aa15.1■□□□□ 0.01
USP44-203ENST00000537435 RNF43Q68DV7 783 aa15.1■□□□□ 0.01
USP44-203ENST00000537435 TDRPQ86YL5 185 aa15.1■□□□□ 0.01
USP44-203ENST00000537435 ZBED8Q8IZ13 594 aa15.1■□□□□ 0.01
USP44-203ENST00000537435 WDTC1Q8N5D0 677 aa15.1■□□□□ 0.01
USP44-203ENST00000537435 GRAMD1AQ96CP6 724 aa15.1■□□□□ 0.01
USP44-203ENST00000537435 KLHL29Q96CT2 875 aa15.1■□□□□ 0.01
USP44-203ENST00000537435 TBC1D31Q96DN5 1066 aa15.1■□□□□ 0.01
USP44-203ENST00000537435 NIF3L1Q9GZT8 377 aa15.1■□□□□ 0.01
USP44-203ENST00000537435 KIF9Q9HAQ2 790 aa15.1■□□□□ 0.01
USP44-203ENST00000537435 DOCK1Q14185 1865 aa15.1■□□□□ 0.01
USP44-203ENST00000537435 SGK1O00141 431 aa15.1■□□□□ 0.01
USP44-203ENST00000537435 FAM189A1O60320 539 aa15.1■□□□□ 0.01
USP44-203ENST00000537435 ASMTLO95671 621 aa15.1■□□□□ 0.01
USP44-203ENST00000537435 WEE2P0C1S8 567 aa15.1■□□□□ 0.01
USP44-203ENST00000537435 EZRP15311 586 aaKnown RBP15.1■□□□□ 0.01
USP44-203ENST00000537435 KRT15P19012 456 aa15.1■□□□□ 0.01
USP44-203ENST00000537435 UBA1P22314 1058 aaKnown RBP15.1■□□□□ 0.01
USP44-203ENST00000537435 RIPK1Q13546 671 aa15.1■□□□□ 0.01
USP44-203ENST00000537435 NEDD9Q14511 834 aa15.1■□□□□ 0.01
USP44-203ENST00000537435 PKN2Q16513 984 aaKnown RBP15.1■□□□□ 0.01
USP44-203ENST00000537435 ZPBP2Q6X784 338 aa15.1■□□□□ 0.01
USP44-203ENST00000537435 SCARA5Q6ZMJ2 495 aa15.1■□□□□ 0.01
USP44-203ENST00000537435 ERICH1Q86X53 443 aa15.1■□□□□ 0.01
USP44-203ENST00000537435 KIF2BQ8N4N8 673 aa15.1■□□□□ 0.01
USP44-203ENST00000537435 TRABDQ9H4I3 376 aa15.1■□□□□ 0.01
USP44-203ENST00000537435 UBN1Q9NPG3 1134 aa15.1■□□□□ 0.01
USP44-203ENST00000537435 NRBP2Q9NSY0 501 aa15.1■□□□□ 0.01
USP44-203ENST00000537435 DDX56Q9NY93 547 aaKnown RBP15.1■□□□□ 0.01
USP44-203ENST00000537435 MCM8Q9UJA3 840 aa15.1■□□□□ 0.01
USP44-203ENST00000537435 PTPN7P35236 360 aa15.09■□□□□ 0.01
USP44-203ENST00000537435 ALDH5A1P51649 535 aaPredicted RBP15.09■□□□□ 0.01
USP44-203ENST00000537435 CCDC142Q17RM4 750 aa15.09■□□□□ 0.01
USP44-203ENST00000537435 ECHDC2Q86YB7 292 aa15.09■□□□□ 0.01
USP44-203ENST00000537435 DNERQ8NFT8 737 aa15.09■□□□□ 0.01
USP44-203ENST00000537435 PRPF31Q8WWY3 499 aaKnown RBP15.09■□□□□ 0.01
USP44-203ENST00000537435 TFAP2BQ92481 460 aa15.09■□□□□ 0.01
USP44-203ENST00000537435 NKD2Q969F2 451 aaPredicted RBP15.09■□□□□ 0.01
USP44-203ENST00000537435 MRRFQ96E11 262 aaKnown RBP15.09■□□□□ 0.01
USP44-203ENST00000537435 ZNF518BQ9C0D4 1074 aa15.09■□□□□ 0.01
USP44-203ENST00000537435 HOXC10Q9NYD6 342 aa15.09■□□□□ 0.01
USP44-203ENST00000537435 GJA3Q9Y6H8 435 aa15.09■□□□□ 0.01
USP44-203ENST00000537435 ALOX15BO15296 676 aa15.09■□□□□ 0.01
USP44-203ENST00000537435 MSCO60682 206 aa15.09■□□□□ 0.01
USP44-203ENST00000537435 TOM1L1O75674 476 aa15.09■□□□□ 0.01
USP44-203ENST00000537435 FARP2O94887 1054 aaPredicted RBP15.09■□□□□ 0.01
USP44-203ENST00000537435 ITGAVP06756 1048 aa15.09■□□□□ 0.01
USP44-203ENST00000537435 PSMC4P43686 418 aa15.09■□□□□ 0.01
USP44-203ENST00000537435 STAT5BP51692 787 aa15.09■□□□□ 0.01
USP44-203ENST00000537435 TAP1Q03518 808 aa15.09■□□□□ 0.01
USP44-203ENST00000537435 PDIA2Q13087 525 aaKnown RBP15.09■□□□□ 0.01
USP44-203ENST00000537435 DNAJC3Q13217 504 aa15.09■□□□□ 0.01
USP44-203ENST00000537435 ACVR2BQ13705 512 aa15.09■□□□□ 0.01
USP44-203ENST00000537435 CENPUQ71F23 418 aa15.09■□□□□ 0.01
USP44-203ENST00000537435 C4orf33Q8N1A6 199 aa15.09■□□□□ 0.01
USP44-203ENST00000537435 GPATCH11Q8N954 259 aa15.09■□□□□ 0.01
USP44-203ENST00000537435 ANKLE1Q8NAG6 615 aa15.09■□□□□ 0.01
USP44-203ENST00000537435 DENND1AQ8TEH3 1009 aa15.09■□□□□ 0.01
USP44-203ENST00000537435 MYCBPQ99417 103 aaPredicted RBP15.09■□□□□ 0.01
USP44-203ENST00000537435 MRPL4Q9BYD3 311 aaKnown RBP15.09■□□□□ 0.01
USP44-203ENST00000537435 PCDH9Q9HC56 1237 aa15.09■□□□□ 0.01
USP44-203ENST00000537435 SHOC2Q9UQ13 582 aa15.09■□□□□ 0.01
USP44-203ENST00000537435 GOLGA8SH3BPF8 625 aa15.08■□□□□ 0.01
USP44-203ENST00000537435 GOLGA8MH3BSY2 632 aa15.08■□□□□ 0.01
USP44-203ENST00000537435 PRPF4O43172 522 aaKnown RBP eCLIP15.08■□□□□ 0.01
USP44-203ENST00000537435 PEX10O60683 326 aa15.08■□□□□ 0.01
USP44-203ENST00000537435 BANF1O75531 89 aa15.08■□□□□ 0.01
USP44-203ENST00000537435 EIF4BP23588 611 aaKnown RBP15.08■□□□□ 0.01
USP44-203ENST00000537435 DYNLT1P63172 113 aa15.08■□□□□ 0.01
USP44-203ENST00000537435 GRM1Q13255 1194 aa15.08■□□□□ 0.01
USP44-203ENST00000537435 TRPC3Q13507 836 aa15.08■□□□□ 0.01
USP44-203ENST00000537435 DUOXA2Q1HG44 320 aa15.08■□□□□ 0.01
USP44-203ENST00000537435 SGSM1Q2NKQ1 1148 aa15.08■□□□□ 0.01
USP44-203ENST00000537435 NIPA2Q8N8Q9 360 aa15.08■□□□□ 0.01
USP44-203ENST00000537435 SPOCK2Q92563 424 aa15.08■□□□□ 0.01
USP44-203ENST00000537435 PRCCQ92733 491 aaPredicted RBP15.08■□□□□ 0.01
USP44-203ENST00000537435 SMC6Q96SB8 1091 aa15.08■□□□□ 0.01
USP44-203ENST00000537435 CEP83Q9Y592 693 aa15.08■□□□□ 0.01
USP44-203ENST00000537435 SIP14410 1827 aa15.08■□□□□ 0
USP44-203ENST00000537435 MAFO75444 373 aaPredicted RBP15.08■□□□□ 0
USP44-203ENST00000537435 KRT16P08779 473 aa15.08■□□□□ 0
USP44-203ENST00000537435 CDH5P33151 784 aaPredicted RBP15.08■□□□□ 0
USP44-203ENST00000537435 TFAMQ00059 246 aaKnown RBP15.08■□□□□ 0
USP44-203ENST00000537435 SPARCL1Q14515 664 aa15.08■□□□□ 0
USP44-203ENST00000537435 AEBP2Q6ZN18 517 aaPredicted RBP15.08■□□□□ 0
USP44-203ENST00000537435 ANKMY2Q8IV38 441 aa15.08■□□□□ 0
USP44-203ENST00000537435 GIMAP7Q8NHV1 300 aa15.08■□□□□ 0
USP44-203ENST00000537435 SLC35B2Q8TB61 432 aa15.08■□□□□ 0
USP44-203ENST00000537435 THOC1Q96FV9 657 aaKnown RBP15.08■□□□□ 0
USP44-203ENST00000537435 ADAM33Q9BZ11 813 aa15.08■□□□□ 0
USP44-203ENST00000537435 ARHGEF3Q9NR81 526 aa15.08■□□□□ 0
USP44-203ENST00000537435 SAE1Q9UBE0 346 aaPredicted RBP15.08■□□□□ 0
USP44-203ENST00000537435 PCDHGC3Q9UN70 934 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms