RNA–Protein interactions for RNA: ENST00000533001.1

KNL1-211, Transcript of kinetochore scaffold 1, humanhuman

TSL 1 (best)

Gene KNL1, Length 5,923 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-211ENST00000533001 WISP2O76076 250 aa1.94□□□□□ -2.1
KNL1-211ENST00000533001 OR4Q2P0C623 313 aa1.94□□□□□ -2.1
KNL1-211ENST00000533001 ATXN1LP0C7T5 689 aaKnown RBP1.94□□□□□ -2.1
KNL1-211ENST00000533001 ARSAP15289 507 aa1.94□□□□□ -2.1
KNL1-211ENST00000533001 HOXB4P17483 251 aaPredicted RBP1.94□□□□□ -2.1
KNL1-211ENST00000533001 CCNE1P24864 410 aa1.94□□□□□ -2.1
KNL1-211ENST00000533001 KCNJ6P48051 423 aa1.94□□□□□ -2.1
KNL1-211ENST00000533001 USP11P51784 963 aa1.94□□□□□ -2.1
KNL1-211ENST00000533001 SCAPQ12770 1279 aa1.94□□□□□ -2.1
KNL1-211ENST00000533001 PTPAQ15257 358 aa1.94□□□□□ -2.1
KNL1-211ENST00000533001 COL28A1Q2UY09 1125 aa1.94□□□□□ -2.1
KNL1-211ENST00000533001 FBXL19Q6PCT2 694 aa1.94□□□□□ -2.1
KNL1-211ENST00000533001 ZC3H14Q6PJT7 736 aaKnown RBP1.94□□□□□ -2.1
KNL1-211ENST00000533001 PDZD3Q86UT5 571 aa1.94□□□□□ -2.1
KNL1-211ENST00000533001 RAB11FIP4Q86YS3 637 aa1.94□□□□□ -2.1
KNL1-211ENST00000533001 SCUBE3Q8IX30 993 aa1.94□□□□□ -2.1
KNL1-211ENST00000533001 CACTIN-AS1Q8N1I8 211 aa1.94□□□□□ -2.1
KNL1-211ENST00000533001 ESR2Q92731 530 aa1.94□□□□□ -2.1
KNL1-211ENST00000533001 CNOT6LQ96LI5 555 aaKnown RBP1.94□□□□□ -2.1
KNL1-211ENST00000533001 HNRNPABQ99729 332 aaKnown RBP1.94□□□□□ -2.1
KNL1-211ENST00000533001 KXD1Q9BQD3 176 aa1.94□□□□□ -2.1
KNL1-211ENST00000533001 FTOQ9C0B1 505 aaKnown RBP eCLIP1.94□□□□□ -2.1
KNL1-211ENST00000533001 SMG9Q9H0W8 520 aaKnown RBP1.94□□□□□ -2.1
KNL1-211ENST00000533001 SLC38A8A6NNN8 435 aa1.93□□□□□ -2.1
KNL1-211ENST00000533001 CBX4O00257 560 aa1.93□□□□□ -2.1
KNL1-211ENST00000533001 EGFP01133 1207 aa1.93□□□□□ -2.1
KNL1-211ENST00000533001 MYBP10242 640 aa1.93□□□□□ -2.1
KNL1-211ENST00000533001 PPM1AP35813 382 aa1.93□□□□□ -2.1
KNL1-211ENST00000533001 GPR15P49685 360 aa1.93□□□□□ -2.1
KNL1-211ENST00000533001 GUCY2FP51841 1108 aa1.93□□□□□ -2.1
KNL1-211ENST00000533001 SMC1AQ14683 1233 aaKnown RBP1.93□□□□□ -2.1
KNL1-211ENST00000533001 CFAP221Q4G0U5 840 aa1.93□□□□□ -2.1
KNL1-211ENST00000533001 SH3PXD2AQ5TCZ1 1133 aa1.93□□□□□ -2.1
KNL1-211ENST00000533001 METTL3Q86U44 580 aaKnown RBP1.93□□□□□ -2.1
KNL1-211ENST00000533001 ZNF410Q86VK4 478 aa1.93□□□□□ -2.1
KNL1-211ENST00000533001 LONP2Q86WA8 852 aa1.93□□□□□ -2.1
KNL1-211ENST00000533001 SFTPA2Q8IWL1 248 aa1.93□□□□□ -2.1
KNL1-211ENST00000533001 ZNF444Q8N0Y2 327 aaPredicted RBP1.93□□□□□ -2.1
KNL1-211ENST00000533001 TMEM143Q96AN5 459 aa1.93□□□□□ -2.1
KNL1-211ENST00000533001 SPC25Q9HBM1 224 aa1.93□□□□□ -2.1
KNL1-211ENST00000533001 OBP2AQ9NY56 170 aa1.93□□□□□ -2.1
KNL1-211ENST00000533001 GMIPQ9P107 970 aa1.93□□□□□ -2.1
KNL1-211ENST00000533001 NFE2L3Q9Y4A8 694 aa1.93□□□□□ -2.1
KNL1-211ENST00000533001 CDY1Q9Y6F8 540 aa1.93□□□□□ -2.1
KNL1-211ENST00000533001 LOC105378220A0A1B0GUY1 285 aaPredicted RBP1.93□□□□□ -2.1
KNL1-211ENST00000533001 WASH3PC4AMC7 463 aa1.93□□□□□ -2.1
KNL1-211ENST00000533001 PENKP01210 267 aaPredicted RBP1.93□□□□□ -2.1
KNL1-211ENST00000533001 IGLV3-25P01717 112 aa1.93□□□□□ -2.1
KNL1-211ENST00000533001 ZSCAN20P17040 1043 aaPredicted RBP1.93□□□□□ -2.1
KNL1-211ENST00000533001 OR1D2P34982 312 aa1.93□□□□□ -2.1
KNL1-211ENST00000533001 TDO2P48775 406 aa1.93□□□□□ -2.1
KNL1-211ENST00000533001 CD97P48960 835 aa1.93□□□□□ -2.1
KNL1-211ENST00000533001 RPL34P49207 117 aaKnown RBP1.93□□□□□ -2.1
KNL1-211ENST00000533001 CDR1P51861 262 aa1.93□□□□□ -2.1
KNL1-211ENST00000533001 MCL1Q07820 350 aa1.93□□□□□ -2.1
KNL1-211ENST00000533001 FGL2Q14314 439 aa1.93□□□□□ -2.1
KNL1-211ENST00000533001 SPATA1Q5VX52 437 aa1.93□□□□□ -2.1
KNL1-211ENST00000533001 PPP1R18Q6NYC8 613 aa1.93□□□□□ -2.1
KNL1-211ENST00000533001 RTL10Q7L3V2 364 aa1.93□□□□□ -2.1
KNL1-211ENST00000533001 CCDC117Q8IWD4 279 aaPredicted RBP1.93□□□□□ -2.1
KNL1-211ENST00000533001 HACE1Q8IYU2 909 aa1.93□□□□□ -2.1
KNL1-211ENST00000533001 KIAA1958Q8N8K9 716 aa1.93□□□□□ -2.1
KNL1-211ENST00000533001 DCBLD1Q8N8Z6 715 aa1.93□□□□□ -2.1
KNL1-211ENST00000533001 C1orf127Q8N9H9 656 aa1.93□□□□□ -2.1
KNL1-211ENST00000533001 SLC7A14Q8TBB6 771 aa1.93□□□□□ -2.1
KNL1-211ENST00000533001 PMEPA1Q969W9 287 aa1.93□□□□□ -2.1
KNL1-211ENST00000533001 TWNKQ96RR1 684 aa1.93□□□□□ -2.1
KNL1-211ENST00000533001 LPIN3Q9BQK8 851 aa1.93□□□□□ -2.1
KNL1-211ENST00000533001 RSAD1Q9HA92 442 aa1.93□□□□□ -2.1
KNL1-211ENST00000533001 ANGPTL2Q9UKU9 493 aa1.93□□□□□ -2.1
KNL1-211ENST00000533001 USP3Q9Y6I4 520 aa1.93□□□□□ -2.1
KNL1-211ENST00000533001 ATXN7O15265 892 aaPredicted RBP1.93□□□□□ -2.1
KNL1-211ENST00000533001 TGFB1I1O43294 461 aa1.93□□□□□ -2.1
KNL1-211ENST00000533001 PSMC3P17980 439 aa1.93□□□□□ -2.1
KNL1-211ENST00000533001 ITGB7P26010 798 aa1.93□□□□□ -2.1
KNL1-211ENST00000533001 U2AF2P26368 475 aaKnown RBP eCLIP1.93□□□□□ -2.1
KNL1-211ENST00000533001 SLC12A3P55017 1021 aa1.93□□□□□ -2.1
KNL1-211ENST00000533001 ARID5BQ14865 1188 aa1.93□□□□□ -2.1
KNL1-211ENST00000533001 UVSSAQ2YD98 709 aa1.93□□□□□ -2.1
KNL1-211ENST00000533001 LONRF3Q496Y0 759 aa1.93□□□□□ -2.1
KNL1-211ENST00000533001 CWC27Q6UX04 472 aaKnown RBP1.93□□□□□ -2.1
KNL1-211ENST00000533001 CCDC149Q6ZUS6 474 aa1.93□□□□□ -2.1
KNL1-211ENST00000533001 RUFY3Q7L099 469 aa1.93□□□□□ -2.1
KNL1-211ENST00000533001 RALGPS2Q86X27 583 aaPredicted RBP1.93□□□□□ -2.1
KNL1-211ENST00000533001 SLC25A45Q8N413 288 aa1.93□□□□□ -2.1
KNL1-211ENST00000533001 ATAD1Q8NBU5 361 aa1.93□□□□□ -2.1
KNL1-211ENST00000533001 TRMT2BQ96GJ1 504 aaKnown RBP1.93□□□□□ -2.1
KNL1-211ENST00000533001 ACO2Q99798 780 aaKnown RBP1.93□□□□□ -2.1
KNL1-211ENST00000533001 TREX2Q9BQ50 279 aaPredicted RBP1.93□□□□□ -2.1
KNL1-211ENST00000533001 PSTPIP2Q9H939 334 aa1.93□□□□□ -2.1
KNL1-211ENST00000533001 DNMT3LQ9UJW3 386 aa1.93□□□□□ -2.1
KNL1-211ENST00000533001 MORC2Q9Y6X9 1032 aaPredicted RBP1.93□□□□□ -2.1
KNL1-211ENST00000533001 C2orf78A6NCI8 922 aa1.93□□□□□ -2.1
KNL1-211ENST00000533001 PP2D1A8MPX8 630 aa1.93□□□□□ -2.1
KNL1-211ENST00000533001 GCOM1H8Y6P7 765 aaPredicted RBP1.93□□□□□ -2.1
KNL1-211ENST00000533001 ACKR2O00590 384 aa1.93□□□□□ -2.1
KNL1-211ENST00000533001 NOL4O94818 638 aa1.93□□□□□ -2.1
KNL1-211ENST00000533001 IGLV3-27P01718 113 aa1.93□□□□□ -2.1
KNL1-211ENST00000533001 POLR2MP0CAP2 368 aa1.93□□□□□ -2.1
KNL1-211ENST00000533001 NFX1Q12986 1120 aaKnown RBP1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms