RNA–Protein interactions for RNA: ENST00000504951.6

GYPB-204, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-204ENST00000504951 NLRP5P59047 1200 aa6.58□□□□□ -1.36
GYPB-204ENST00000504951 C19orf57Q0VDD7 668 aa6.58□□□□□ -1.36
GYPB-204ENST00000504951 GPR17Q13304 367 aa6.58□□□□□ -1.36
GYPB-204ENST00000504951 RUNX3Q13761 415 aa6.58□□□□□ -1.36
GYPB-204ENST00000504951 MYBPC2Q14324 1141 aa6.58□□□□□ -1.36
GYPB-204ENST00000504951 ZNF268Q14587 947 aaPredicted RBP6.58□□□□□ -1.36
GYPB-204ENST00000504951 MAPK6Q16659 721 aa6.58□□□□□ -1.36
GYPB-204ENST00000504951 HSF5Q4G112 596 aaPredicted RBP6.58□□□□□ -1.36
GYPB-204ENST00000504951 ZNF280DQ6N043 979 aa6.58□□□□□ -1.36
GYPB-204ENST00000504951 RNF19BQ6ZMZ0 732 aa6.58□□□□□ -1.36
GYPB-204ENST00000504951 GAREM2Q75VX8 874 aa6.58□□□□□ -1.36
GYPB-204ENST00000504951 CENPQQ7L2Z9 268 aaPredicted RBP6.58□□□□□ -1.36
GYPB-204ENST00000504951 KRT25Q7Z3Z0 450 aa6.58□□□□□ -1.36
GYPB-204ENST00000504951 RABEPKQ7Z6M1 372 aa6.58□□□□□ -1.36
GYPB-204ENST00000504951 DNAJB7Q7Z6W7 309 aaPredicted RBP6.58□□□□□ -1.36
GYPB-204ENST00000504951 GLRX5Q86SX6 157 aa6.58□□□□□ -1.36
GYPB-204ENST00000504951 ITIH5Q86UX2 942 aa6.58□□□□□ -1.36
GYPB-204ENST00000504951 SYT12Q8IV01 421 aa6.58□□□□□ -1.36
GYPB-204ENST00000504951 ZBTB8OSQ8IWT0 167 aa6.58□□□□□ -1.36
GYPB-204ENST00000504951 BLIDQ8IZY5 108 aa6.58□□□□□ -1.36
GYPB-204ENST00000504951 DEFB124Q8NES8 71 aa6.58□□□□□ -1.36
GYPB-204ENST00000504951 CEP76Q8TAP6 659 aa6.58□□□□□ -1.36
GYPB-204ENST00000504951 CNOT6LQ96LI5 555 aaKnown RBP6.58□□□□□ -1.36
GYPB-204ENST00000504951 BBC3Q96PG8 261 aaPredicted RBP6.58□□□□□ -1.36
GYPB-204ENST00000504951 TSPAN18Q96SJ8 248 aa6.58□□□□□ -1.36
GYPB-204ENST00000504951 NUSAP1Q9BXS6 441 aaKnown RBP6.58□□□□□ -1.36
GYPB-204ENST00000504951 CCDC113Q9H0I3 377 aa6.58□□□□□ -1.36
GYPB-204ENST00000504951 DNAJC25Q9H1X3 360 aa6.58□□□□□ -1.36
GYPB-204ENST00000504951 KIF9Q9HAQ2 790 aa6.58□□□□□ -1.36
GYPB-204ENST00000504951 TOPORSQ9NS56 1045 aaPredicted RBP6.58□□□□□ -1.36
GYPB-204ENST00000504951 GJB4Q9NTQ9 266 aa6.58□□□□□ -1.36
GYPB-204ENST00000504951 URB1O60287 2271 aaKnown RBP6.58□□□□□ -1.36
GYPB-204ENST00000504951 KIF26AQ9ULI4 1882 aaPredicted RBP6.58□□□□□ -1.36
GYPB-204ENST00000504951 PHLPP2Q6ZVD8 1323 aa6.57□□□□□ -1.36
GYPB-204ENST00000504951 A0A087WV48 116 aa6.57□□□□□ -1.36
GYPB-204ENST00000504951 A0A0A0MRY4 1105 aa6.57□□□□□ -1.36
GYPB-204ENST00000504951 A0A1W2PRU2 124 aa6.57□□□□□ -1.36
GYPB-204ENST00000504951 FAM181BA6NEQ2 426 aa6.57□□□□□ -1.36
GYPB-204ENST00000504951 CAPN8A6NHC0 703 aa6.57□□□□□ -1.36
GYPB-204ENST00000504951 OR6C75A6NL08 312 aa6.57□□□□□ -1.36
GYPB-204ENST00000504951 E9PAM4 449 aa6.57□□□□□ -1.36
GYPB-204ENST00000504951 ZBTB39O15060 712 aa6.57□□□□□ -1.36
GYPB-204ENST00000504951 DKK1O94907 266 aa6.57□□□□□ -1.36
GYPB-204ENST00000504951 VNN2O95498 520 aa6.57□□□□□ -1.36
GYPB-204ENST00000504951 MYL4P12829 197 aa6.57□□□□□ -1.36
GYPB-204ENST00000504951 CDC25CP30307 473 aa6.57□□□□□ -1.36
GYPB-204ENST00000504951 GRM5P41594 1212 aa6.57□□□□□ -1.36
GYPB-204ENST00000504951 PI4KAP42356 2102 aa6.57□□□□□ -1.36
GYPB-204ENST00000504951 ALDH1A3P47895 512 aa6.57□□□□□ -1.36
GYPB-204ENST00000504951 PXNP49023 591 aaPredicted RBP6.57□□□□□ -1.36
GYPB-204ENST00000504951 AARSP49588 968 aaKnown RBP eCLIP6.57□□□□□ -1.36
GYPB-204ENST00000504951 GALK1P51570 392 aa6.57□□□□□ -1.36
GYPB-204ENST00000504951 EFNA5P52803 228 aa6.57□□□□□ -1.36
GYPB-204ENST00000504951 SIM1P81133 766 aaPredicted RBP6.57□□□□□ -1.36
GYPB-204ENST00000504951 CYP4A11Q02928 519 aa6.57□□□□□ -1.36
GYPB-204ENST00000504951 SCAPQ12770 1279 aa6.57□□□□□ -1.36
GYPB-204ENST00000504951 SMARCB1Q12824 385 aa6.57□□□□□ -1.36
GYPB-204ENST00000504951 PRPF4BQ13523 1007 aaKnown RBP6.57□□□□□ -1.36
GYPB-204ENST00000504951 BYSLQ13895 437 aaKnown RBP6.57□□□□□ -1.36
GYPB-204ENST00000504951 DMC1Q14565 340 aa6.57□□□□□ -1.36
GYPB-204ENST00000504951 PDGFRLQ15198 375 aa6.57□□□□□ -1.36
GYPB-204ENST00000504951 INF2Q27J81 1249 aa6.57□□□□□ -1.36
GYPB-204ENST00000504951 COL28A1Q2UY09 1125 aa6.57□□□□□ -1.36
GYPB-204ENST00000504951 CTXN3Q4LDR2 81 aa6.57□□□□□ -1.36
GYPB-204ENST00000504951 ARHGAP15Q53QZ3 475 aa6.57□□□□□ -1.36
GYPB-204ENST00000504951 CENPPQ6IPU0 288 aa6.57□□□□□ -1.36
GYPB-204ENST00000504951 CYP2U1Q7Z449 544 aa6.57□□□□□ -1.36
GYPB-204ENST00000504951 CDR2LQ86X02 465 aaPredicted RBP6.57□□□□□ -1.36
GYPB-204ENST00000504951 DYDC2Q96IM9 177 aa6.57□□□□□ -1.36
GYPB-204ENST00000504951 MRGPRX2Q96LB1 330 aa6.57□□□□□ -1.36
GYPB-204ENST00000504951 TBC1D32Q96NH3 1257 aa6.57□□□□□ -1.36
GYPB-204ENST00000504951 UBL7Q96S82 380 aaPredicted RBP6.57□□□□□ -1.36
GYPB-204ENST00000504951 PI4K2AQ9BTU6 479 aa6.57□□□□□ -1.36
GYPB-204ENST00000504951 POLR3FQ9H1D9 316 aaPredicted RBP6.57□□□□□ -1.36
GYPB-204ENST00000504951 CXCL16Q9H2A7 254 aa6.57□□□□□ -1.36
GYPB-204ENST00000504951 CCDC86Q9H6F5 360 aaKnown RBP6.57□□□□□ -1.36
GYPB-204ENST00000504951 PTPRHQ9HD43 1115 aa6.57□□□□□ -1.36
GYPB-204ENST00000504951 HPS4Q9NQG7 708 aa6.57□□□□□ -1.36
GYPB-204ENST00000504951 GKN1Q9NS71 199 aa6.57□□□□□ -1.36
GYPB-204ENST00000504951 DNAAF2Q9NVR5 837 aaKnown RBP6.57□□□□□ -1.36
GYPB-204ENST00000504951 CNTN3Q9P232 1028 aa6.57□□□□□ -1.36
GYPB-204ENST00000504951 KCNJ14Q9UNX9 436 aa6.57□□□□□ -1.36
GYPB-204ENST00000504951 TNFSF13BQ9Y275 285 aa6.57□□□□□ -1.36
GYPB-204ENST00000504951 YIPF1Q9Y548 306 aa6.57□□□□□ -1.36
GYPB-204ENST00000504951 APC2O95996 2303 aa6.57□□□□□ -1.36
GYPB-204ENST00000504951 NUP210Q8TEM1 1887 aaPredicted RBP6.57□□□□□ -1.36
GYPB-204ENST00000504951 BPTFQ12830 3046 aa6.57□□□□□ -1.36
GYPB-204ENST00000504951 OTOL1A6NHN0 477 aaPredicted RBP6.56□□□□□ -1.36
GYPB-204ENST00000504951 EIF4E1BA6NMX2 242 aaKnown RBP6.56□□□□□ -1.36
GYPB-204ENST00000504951 PODXLO00592 558 aa6.56□□□□□ -1.36
GYPB-204ENST00000504951 DCLK1O15075 740 aa6.56□□□□□ -1.36
GYPB-204ENST00000504951 GPR37O15354 613 aa6.56□□□□□ -1.36
GYPB-204ENST00000504951 DEXIO95424 95 aa6.56□□□□□ -1.36
GYPB-204ENST00000504951 BAG4O95429 457 aaKnown RBP6.56□□□□□ -1.36
GYPB-204ENST00000504951 EGFP01133 1207 aa6.56□□□□□ -1.36
GYPB-204ENST00000504951 TCF3P15923 654 aa6.56□□□□□ -1.36
GYPB-204ENST00000504951 GJA1P17302 382 aa6.56□□□□□ -1.36
GYPB-204ENST00000504951 TYMPP19971 482 aa6.56□□□□□ -1.36
GYPB-204ENST00000504951 CYP3A5P20815 502 aa6.56□□□□□ -1.36
GYPB-204ENST00000504951 MUTP22033 750 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms