RNA–Protein interactions for RNA: ENST00000498739.1

PRKCB-210, Transcript of protein kinase C beta, humanhuman

TSL 4

Gene PRKCB, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-210ENST00000498739 SNX25Q9H3E2 840 aa17.95■□□□□ 0.46
PRKCB-210ENST00000498739 SMYD3Q9H7B4 428 aa17.95■□□□□ 0.46
PRKCB-210ENST00000498739 XIRP2A4UGR9 3374 aa17.94■□□□□ 0.46
PRKCB-210ENST00000498739 CCL16O15467 120 aa17.94■□□□□ 0.46
PRKCB-210ENST00000498739 VNN2O95498 520 aa17.94■□□□□ 0.46
PRKCB-210ENST00000498739 LRG1P02750 347 aa17.94■□□□□ 0.46
PRKCB-210ENST00000498739 HNRNPA1P09651 372 aaKnown RBP eCLIP17.94■□□□□ 0.462e-6■■□□□ 14.5
PRKCB-210ENST00000498739 PCSK1P29120 753 aa17.94■□□□□ 0.46
PRKCB-210ENST00000498739 HOXA9P31269 272 aa17.94■□□□□ 0.46
PRKCB-210ENST00000498739 FMO5P49326 533 aa17.94■□□□□ 0.46
PRKCB-210ENST00000498739 MARSP56192 900 aaKnown RBP17.94■□□□□ 0.46
PRKCB-210ENST00000498739 NOP14P78316 857 aaKnown RBP17.94■□□□□ 0.46
PRKCB-210ENST00000498739 CT47A1Q5JQC4 288 aaPredicted RBP17.94■□□□□ 0.46
PRKCB-210ENST00000498739 INTS6LQ5JSJ4 861 aaKnown RBP17.94■□□□□ 0.46
PRKCB-210ENST00000498739 RTL10Q7L3V2 364 aa17.94■□□□□ 0.46
PRKCB-210ENST00000498739 LRRTM3Q86VH5 581 aa17.94■□□□□ 0.46
PRKCB-210ENST00000498739 TRIM59Q8IWR1 403 aa17.94■□□□□ 0.46
PRKCB-210ENST00000498739 TCEAL8Q8IYN2 117 aa17.94■□□□□ 0.46
PRKCB-210ENST00000498739 ADAMTS19Q8TE59 1207 aa17.94■□□□□ 0.46
PRKCB-210ENST00000498739 NECTIN4Q96NY8 510 aa17.94■□□□□ 0.46
PRKCB-210ENST00000498739 POMKQ9H5K3 350 aa17.94■□□□□ 0.46
PRKCB-210ENST00000498739 ANO10Q9NW15 660 aa17.94■□□□□ 0.46
PRKCB-210ENST00000498739 RAB20Q9NX57 234 aa17.94■□□□□ 0.46
PRKCB-210ENST00000498739 MAFFQ9ULX9 164 aa17.94■□□□□ 0.46
PRKCB-210ENST00000498739 INSL5Q9Y5Q6 135 aa17.94■□□□□ 0.46
PRKCB-210ENST00000498739 XYLBO75191 536 aa17.93■□□□□ 0.46
PRKCB-210ENST00000498739 LRRN2O75325 713 aa17.93■□□□□ 0.46
PRKCB-210ENST00000498739 PDGFRBP09619 1106 aa17.93■□□□□ 0.46
PRKCB-210ENST00000498739 FAM163BP0C2L3 166 aa17.93■□□□□ 0.46
PRKCB-210ENST00000498739 LMO2P25791 158 aa17.93■□□□□ 0.46
PRKCB-210ENST00000498739 GNL1P36915 607 aaPredicted RBP17.93■□□□□ 0.46
PRKCB-210ENST00000498739 CDH8P55286 799 aa17.93■□□□□ 0.46
PRKCB-210ENST00000498739 PSMC1P62191 440 aaKnown RBP17.93■□□□□ 0.46
PRKCB-210ENST00000498739 DUSP4Q13115 394 aa17.93■□□□□ 0.46
PRKCB-210ENST00000498739 CYP26C1Q6V0L0 522 aa17.93■□□□□ 0.46
PRKCB-210ENST00000498739 C11orf57Q6ZUT1 292 aaPredicted RBP17.93■□□□□ 0.46
PRKCB-210ENST00000498739 ATAD1Q8NBU5 361 aa17.93■□□□□ 0.46
PRKCB-210ENST00000498739 SEMA4DQ92854 862 aa17.93■□□□□ 0.46
PRKCB-210ENST00000498739 SYT15Q9BQS2 421 aa17.93■□□□□ 0.46
PRKCB-210ENST00000498739 SDCBP2Q9H190 292 aa17.93■□□□□ 0.46
PRKCB-210ENST00000498739 CRISPLD1Q9H336 500 aa17.93■□□□□ 0.46
PRKCB-210ENST00000498739 APOBEC3GQ9HC16 384 aaKnown RBP17.93■□□□□ 0.46
PRKCB-210ENST00000498739 TMLHEQ9NVH6 421 aa17.93■□□□□ 0.46
PRKCB-210ENST00000498739 CDH9Q9ULB4 789 aa17.93■□□□□ 0.46
PRKCB-210ENST00000498739 SLC27A5Q9Y2P5 690 aa17.93■□□□□ 0.46
PRKCB-210ENST00000498739 YIPF1Q9Y548 306 aa17.93■□□□□ 0.46
PRKCB-210ENST00000498739 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.93■□□□□ 0.46
PRKCB-210ENST00000498739 SPTBN5Q9NRC6 3674 aaKnown RBP17.93■□□□□ 0.46
PRKCB-210ENST00000498739 A8MXQ7 604 aa17.92■□□□□ 0.46
PRKCB-210ENST00000498739 N4BP1O75113 896 aaKnown RBP17.92■□□□□ 0.46
PRKCB-210ENST00000498739 PAPLNO95428 1278 aa17.92■□□□□ 0.46
PRKCB-210ENST00000498739 ASPAP45381 313 aa17.92■□□□□ 0.46
PRKCB-210ENST00000498739 TYRO3Q06418 890 aa17.92■□□□□ 0.46
PRKCB-210ENST00000498739 TWF1Q12792 350 aa17.92■□□□□ 0.46
PRKCB-210ENST00000498739 KCNH2Q12809 1159 aa17.92■□□□□ 0.46
PRKCB-210ENST00000498739 SMARCB1Q12824 385 aa17.92■□□□□ 0.46
PRKCB-210ENST00000498739 WDR44Q5JSH3 913 aa17.92■□□□□ 0.46
PRKCB-210ENST00000498739 TTC9BQ8N6N2 239 aa17.92■□□□□ 0.46
PRKCB-210ENST00000498739 C2orf15Q8WU43 125 aaKnown RBP17.92■□□□□ 0.46
PRKCB-210ENST00000498739 NECAB3Q96P71 396 aaPredicted RBP17.92■□□□□ 0.46
PRKCB-210ENST00000498739 PHF7Q9BWX1 381 aaPredicted RBP17.92■□□□□ 0.46
PRKCB-210ENST00000498739 RHOBTB2Q9BYZ6 727 aa17.92■□□□□ 0.46
PRKCB-210ENST00000498739 NIF3L1Q9GZT8 377 aa17.92■□□□□ 0.46
PRKCB-210ENST00000498739 THAP9Q9H5L6 903 aa17.92■□□□□ 0.46
PRKCB-210ENST00000498739 ABI2Q9NYB9 513 aaPredicted RBP17.92■□□□□ 0.46
PRKCB-210ENST00000498739 PRKAG3Q9UGI9 489 aa17.92■□□□□ 0.46
PRKCB-210ENST00000498739 GTF3C4Q9UKN8 822 aa17.92■□□□□ 0.46
PRKCB-210ENST00000498739 COQ4Q9Y3A0 265 aa17.92■□□□□ 0.46
PRKCB-210ENST00000498739 NME7Q9Y5B8 376 aa17.92■□□□□ 0.46
PRKCB-210ENST00000498739 ATP2C2O75185 946 aa17.91■□□□□ 0.46
PRKCB-210ENST00000498739 AFPP02771 609 aaKnown RBP17.91■□□□□ 0.46
PRKCB-210ENST00000498739 SP100P23497 879 aaPredicted RBP17.91■□□□□ 0.46
PRKCB-210ENST00000498739 MTIF2P46199 727 aaKnown RBP17.91■□□□□ 0.46
PRKCB-210ENST00000498739 NFE2Q16621 373 aaPredicted RBP17.91■□□□□ 0.46
PRKCB-210ENST00000498739 CCDC142Q17RM4 750 aa17.91■□□□□ 0.46
PRKCB-210ENST00000498739 MGAT5BQ3V5L5 792 aa17.91■□□□□ 0.46
PRKCB-210ENST00000498739 HSP90AA4PQ58FG1 418 aa17.91■□□□□ 0.46
PRKCB-210ENST00000498739 GRASPQ7Z6J2 395 aaPredicted RBP17.91■□□□□ 0.46
PRKCB-210ENST00000498739 IRF2BP1Q8IU81 584 aa17.91■□□□□ 0.46
PRKCB-210ENST00000498739 FAM114A1Q8IWE2 563 aa17.91■□□□□ 0.46
PRKCB-210ENST00000498739 ADHFE1Q8IWW8 467 aa17.91■□□□□ 0.46
PRKCB-210ENST00000498739 SPPL2BQ8TCT7 592 aa17.91■□□□□ 0.46
PRKCB-210ENST00000498739 RPGRIP1Q96KN7 1286 aa17.91■□□□□ 0.46
PRKCB-210ENST00000498739 UHRF1Q96T88 793 aaPredicted RBP17.91■□□□□ 0.46
PRKCB-210ENST00000498739 PKMYT1Q99640 499 aa17.91■□□□□ 0.46
PRKCB-210ENST00000498739 SEPT5Q99719 369 aaPredicted RBP17.91■□□□□ 0.46
PRKCB-210ENST00000498739 DNAJC25Q9H1X3 360 aa17.91■□□□□ 0.46
PRKCB-210ENST00000498739 MAGEC2Q9UBF1 373 aaPredicted RBP17.91■□□□□ 0.46
PRKCB-210ENST00000498739 PCDHB5Q9Y5E4 795 aa17.91■□□□□ 0.46
PRKCB-210ENST00000498739 MTCL1Q9Y4B5 1905 aaKnown RBP17.91■□□□□ 0.46
PRKCB-210ENST00000498739 MYBPHLA2RUH7 354 aa17.9■□□□□ 0.46
PRKCB-210ENST00000498739 SOAT2O75908 522 aa17.9■□□□□ 0.46
PRKCB-210ENST00000498739 POU2F2P09086 479 aa17.9■□□□□ 0.46
PRKCB-210ENST00000498739 CETN1Q12798 172 aa17.9■□□□□ 0.46
PRKCB-210ENST00000498739 PLD1Q13393 1074 aa17.9■□□□□ 0.46
PRKCB-210ENST00000498739 SPATA2LQ8IUW3 424 aaPredicted RBP17.9■□□□□ 0.46
PRKCB-210ENST00000498739 ELMOD1Q8N336 334 aa17.9■□□□□ 0.46
PRKCB-210ENST00000498739 ENOX1Q8TC92 643 aaKnown RBP17.9■□□□□ 0.46
PRKCB-210ENST00000498739 BCO2Q9BYV7 579 aa17.9■□□□□ 0.46
PRKCB-210ENST00000498739 DPEP3Q9H4B8 488 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms