RNA–Protein interactions for RNA: ENST00000490539.1

CSTF1-205, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 929 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-205ENST00000490539 CRY1Q16526 586 aa5.31□□□□□ -1.56
CSTF1-205ENST00000490539 LRIT3Q3SXY7 679 aa5.31□□□□□ -1.56
CSTF1-205ENST00000490539 BRDTQ58F21 947 aaPredicted RBP5.31□□□□□ -1.56
CSTF1-205ENST00000490539 KIAA1755Q5JYT7 1200 aa5.31□□□□□ -1.56
CSTF1-205ENST00000490539 BTNL9Q6UXG8 535 aa5.31□□□□□ -1.56
CSTF1-205ENST00000490539 LIPIQ6XZB0 460 aa5.31□□□□□ -1.56
CSTF1-205ENST00000490539 NOL8Q76FK4 1167 aaKnown RBP5.31□□□□□ -1.56
CSTF1-205ENST00000490539 CHST3Q7LGC8 479 aa5.31□□□□□ -1.56
CSTF1-205ENST00000490539 FAM124AQ86V42 546 aa5.31□□□□□ -1.56
CSTF1-205ENST00000490539 FAM26EQ8N5C1 309 aa5.31□□□□□ -1.56
CSTF1-205ENST00000490539 UHMK1Q8TAS1 419 aaKnown RBP5.31□□□□□ -1.56
CSTF1-205ENST00000490539 CUL5Q93034 780 aa5.31□□□□□ -1.56
CSTF1-205ENST00000490539 JAKMIP1Q96N16 626 aaKnown RBP5.31□□□□□ -1.56
CSTF1-205ENST00000490539 DEFB118Q96PH6 123 aa5.31□□□□□ -1.56
CSTF1-205ENST00000490539 KCNC2Q96PR1 638 aa5.31□□□□□ -1.56
CSTF1-205ENST00000490539 MAP3K14Q99558 947 aa5.31□□□□□ -1.56
CSTF1-205ENST00000490539 GORASP1Q9BQQ3 440 aa5.31□□□□□ -1.56
CSTF1-205ENST00000490539 HTATIP2Q9BUP3 242 aa5.31□□□□□ -1.56
CSTF1-205ENST00000490539 AMNQ9BXJ7 453 aa5.31□□□□□ -1.56
CSTF1-205ENST00000490539 TSPY26PQ9H489 355 aa5.31□□□□□ -1.56
CSTF1-205ENST00000490539 IPPKQ9H8X2 491 aa5.31□□□□□ -1.56
CSTF1-205ENST00000490539 VAT1LQ9HCJ6 419 aa5.31□□□□□ -1.56
CSTF1-205ENST00000490539 RNF146Q9NTX7 359 aa5.31□□□□□ -1.56
CSTF1-205ENST00000490539 RBM28Q9NW13 759 aaKnown RBP5.31□□□□□ -1.56
CSTF1-205ENST00000490539 MAP3K20Q9NYL2 800 aaKnown RBP5.31□□□□□ -1.56
CSTF1-205ENST00000490539 PPARGC1AQ9UBK2 798 aaKnown RBP5.31□□□□□ -1.56
CSTF1-205ENST00000490539 NDOR1Q9UHB4 597 aa5.31□□□□□ -1.56
CSTF1-205ENST00000490539 SFMBT1Q9UHJ3 866 aa5.31□□□□□ -1.56
CSTF1-205ENST00000490539 GJD2Q9UKL4 321 aa5.31□□□□□ -1.56
CSTF1-205ENST00000490539 PCDHA8Q9Y5H6 950 aa5.31□□□□□ -1.56
CSTF1-205ENST00000490539 FLNBO75369 2602 aaKnown RBP5.31□□□□□ -1.56
CSTF1-205ENST00000490539 ABCB11O95342 1321 aa5.3□□□□□ -1.56
CSTF1-205ENST00000490539 LOC102724159A0A0B4J2E5 919 aa5.3□□□□□ -1.56
CSTF1-205ENST00000490539 SYCE3A1L190 88 aa5.3□□□□□ -1.56
CSTF1-205ENST00000490539 KBTBD13C9JR72 458 aa5.3□□□□□ -1.56
CSTF1-205ENST00000490539 DYNC1I1O14576 645 aa5.3□□□□□ -1.56
CSTF1-205ENST00000490539 CPLX1O14810 134 aa5.3□□□□□ -1.56
CSTF1-205ENST00000490539 ZBTB5O15062 677 aa5.3□□□□□ -1.56
CSTF1-205ENST00000490539 ZBTB43O43298 467 aa5.3□□□□□ -1.56
CSTF1-205ENST00000490539 TRIM13O60858 407 aa5.3□□□□□ -1.56
CSTF1-205ENST00000490539 CNMDO75829 334 aa5.3□□□□□ -1.56
CSTF1-205ENST00000490539 LETM1O95202 739 aaPredicted RBP5.3□□□□□ -1.56
CSTF1-205ENST00000490539 SNHG28P0DPA3 235 aa5.3□□□□□ -1.56
CSTF1-205ENST00000490539 RARBP10826 455 aa5.3□□□□□ -1.56
CSTF1-205ENST00000490539 CASTP20810 708 aaKnown RBP5.3□□□□□ -1.56
CSTF1-205ENST00000490539 SMARCA1P28370 1054 aa5.3□□□□□ -1.56
CSTF1-205ENST00000490539 HSPA4P34932 840 aa5.3□□□□□ -1.56
CSTF1-205ENST00000490539 RCAN1P53805 252 aa5.3□□□□□ -1.56
CSTF1-205ENST00000490539 SLURP1P55000 103 aa5.3□□□□□ -1.56
CSTF1-205ENST00000490539 GJA9P57773 515 aa5.3□□□□□ -1.56
CSTF1-205ENST00000490539 TUSC3Q13454 348 aa5.3□□□□□ -1.56
CSTF1-205ENST00000490539 PWP2Q15269 919 aaKnown RBP5.3□□□□□ -1.56
CSTF1-205ENST00000490539 CDC37Q16543 378 aaPredicted RBP5.3□□□□□ -1.56
CSTF1-205ENST00000490539 USH1GQ495M9 461 aa5.3□□□□□ -1.56
CSTF1-205ENST00000490539 VWA3BQ502W6 1294 aa5.3□□□□□ -1.56
CSTF1-205ENST00000490539 FOXB2Q5VYV0 432 aa5.3□□□□□ -1.56
CSTF1-205ENST00000490539 VASNQ6EMK4 673 aa5.3□□□□□ -1.56
CSTF1-205ENST00000490539 TEPPQ6URK8 271 aa5.3□□□□□ -1.56
CSTF1-205ENST00000490539 RNF207Q6ZRF8 634 aa5.3□□□□□ -1.56
CSTF1-205ENST00000490539 CYB5R4Q7L1T6 521 aa5.3□□□□□ -1.56
CSTF1-205ENST00000490539 MTERF4Q7Z6M4 381 aaKnown RBP5.3□□□□□ -1.56
CSTF1-205ENST00000490539 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.3□□□□□ -1.56
CSTF1-205ENST00000490539 HOMER1Q86YM7 354 aa5.3□□□□□ -1.56
CSTF1-205ENST00000490539 MB21D2Q8IYB1 491 aaPredicted RBP5.3□□□□□ -1.56
CSTF1-205ENST00000490539 ADGRF4Q8IZF3 695 aa5.3□□□□□ -1.56
CSTF1-205ENST00000490539 CARFQ8N187 725 aa5.3□□□□□ -1.56
CSTF1-205ENST00000490539 SAMD3Q8N6K7 520 aa5.3□□□□□ -1.56
CSTF1-205ENST00000490539 FAM184AQ8NB25 1140 aa5.3□□□□□ -1.56
CSTF1-205ENST00000490539 MAFAQ8NHW3 353 aaPredicted RBP5.3□□□□□ -1.56
CSTF1-205ENST00000490539 CCDC12Q8WUD4 166 aaPredicted RBP5.3□□□□□ -1.56
CSTF1-205ENST00000490539 MAML3Q96JK9 1138 aa5.3□□□□□ -1.56
CSTF1-205ENST00000490539 EXOC2Q96KP1 924 aa5.3□□□□□ -1.56
CSTF1-205ENST00000490539 UBA5Q9GZZ9 404 aa5.3□□□□□ -1.56
CSTF1-205ENST00000490539 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.3□□□□□ -1.56
CSTF1-205ENST00000490539 GLT8D2Q9H1C3 349 aa5.3□□□□□ -1.56
CSTF1-205ENST00000490539 RANBP17Q9H2T7 1088 aaKnown RBP5.3□□□□□ -1.56
CSTF1-205ENST00000490539 ABHD16BQ9H3Z7 469 aa5.3□□□□□ -1.56
CSTF1-205ENST00000490539 FAM184BQ9ULE4 1060 aa5.3□□□□□ -1.56
CSTF1-205ENST00000490539 PCDHA1Q9Y5I3 950 aa5.3□□□□□ -1.56
CSTF1-205ENST00000490539 LAMA4Q16363 1823 aa5.3□□□□□ -1.56
CSTF1-205ENST00000490539 GREB1LQ9C091 1923 aaPredicted RBP5.29□□□□□ -1.56
CSTF1-205ENST00000490539 MGAMO43451 1857 aa5.29□□□□□ -1.56
CSTF1-205ENST00000490539 KLF18A0A0U1RQI7 1052 aa5.29□□□□□ -1.56
CSTF1-205ENST00000490539 SH2B2O14492 632 aaPredicted RBP5.29□□□□□ -1.56
CSTF1-205ENST00000490539 SEPT4O43236 478 aa5.29□□□□□ -1.56
CSTF1-205ENST00000490539 ZEB2O60315 1214 aa5.29□□□□□ -1.56
CSTF1-205ENST00000490539 CDKL5O76039 1030 aa5.29□□□□□ -1.56
CSTF1-205ENST00000490539 SGPL1O95470 568 aa5.29□□□□□ -1.56
CSTF1-205ENST00000490539 PGK2P07205 417 aa5.29□□□□□ -1.56
CSTF1-205ENST00000490539 SRGAP2CP0DJJ0 459 aa5.29□□□□□ -1.56
CSTF1-205ENST00000490539 AKR1A1P14550 325 aa5.29□□□□□ -1.56
CSTF1-205ENST00000490539 XBP1P17861 261 aa5.29□□□□□ -1.56
CSTF1-205ENST00000490539 RPL13P26373 211 aaKnown RBP5.29□□□□□ -1.56
CSTF1-205ENST00000490539 CALML3P27482 149 aa5.29□□□□□ -1.56
CSTF1-205ENST00000490539 CTGFP29279 349 aa5.29□□□□□ -1.56
CSTF1-205ENST00000490539 CYP2C19P33261 490 aa5.29□□□□□ -1.56
CSTF1-205ENST00000490539 THBS2P35442 1172 aa5.29□□□□□ -1.56
CSTF1-205ENST00000490539 METAP2P50579 478 aaKnown RBP eCLIP5.29□□□□□ -1.56
CSTF1-205ENST00000490539 ITGA1P56199 1179 aa5.29□□□□□ -1.56
CSTF1-205ENST00000490539 GRM4Q14833 912 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms