RNA–Protein interactions for RNA: ENST00000474843.1

SRRM1-210, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 817 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-210ENST00000474843 PCDHA13Q9Y5I0 950 aa6.33□□□□□ -1.4
SRRM1-210ENST00000474843 ATP10DQ9P241 1426 aa6.33□□□□□ -1.4
SRRM1-210ENST00000474843 SCN7AQ01118 1682 aa6.33□□□□□ -1.4
SRRM1-210ENST00000474843 CARMIL3Q8ND23 1372 aa6.32□□□□□ -1.4
SRRM1-210ENST00000474843 POLRMTO00411 1230 aaKnown RBP6.32□□□□□ -1.4
SRRM1-210ENST00000474843 AKAP10O43572 662 aa6.32□□□□□ -1.4
SRRM1-210ENST00000474843 GASTP01350 101 aa6.32□□□□□ -1.4
SRRM1-210ENST00000474843 PCCAP05165 728 aaPredicted RBP6.32□□□□□ -1.4
SRRM1-210ENST00000474843 GNAI3P08754 354 aa6.32□□□□□ -1.4
SRRM1-210ENST00000474843 MMP10P09238 476 aa6.32□□□□□ -1.4
SRRM1-210ENST00000474843 RAP2AP10114 183 aa6.32□□□□□ -1.4
SRRM1-210ENST00000474843 ZNF20P17024 532 aa6.32□□□□□ -1.4
SRRM1-210ENST00000474843 FPR1P21462 350 aa6.32□□□□□ -1.4
SRRM1-210ENST00000474843 EDNRBP24530 442 aa6.32□□□□□ -1.4
SRRM1-210ENST00000474843 ADKP55263 362 aaKnown RBP6.32□□□□□ -1.4
SRRM1-210ENST00000474843 TGFB2P61812 414 aa6.32□□□□□ -1.4
SRRM1-210ENST00000474843 CRHR2Q13324 411 aa6.32□□□□□ -1.4
SRRM1-210ENST00000474843 GCKRQ14397 625 aa6.32□□□□□ -1.4
SRRM1-210ENST00000474843 BEND3Q5T5X7 828 aa6.32□□□□□ -1.4
SRRM1-210ENST00000474843 SUSD4Q5VX71 490 aa6.32□□□□□ -1.4
SRRM1-210ENST00000474843 MAMDC4Q6UXC1 1216 aa6.32□□□□□ -1.4
SRRM1-210ENST00000474843 Q6ZRM9 215 aa6.32□□□□□ -1.4
SRRM1-210ENST00000474843 SMIM5Q71RC9 77 aa6.32□□□□□ -1.4
SRRM1-210ENST00000474843 PDZD4Q76G19 769 aaPredicted RBP6.32□□□□□ -1.4
SRRM1-210ENST00000474843 FTSJ3Q8IY81 847 aaKnown RBP6.32□□□□□ -1.4
SRRM1-210ENST00000474843 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.32□□□□□ -1.4
SRRM1-210ENST00000474843 ATXN2LQ8WWM7 1075 aaKnown RBP6.32□□□□□ -1.4
SRRM1-210ENST00000474843 COA7Q96BR5 231 aa6.32□□□□□ -1.4
SRRM1-210ENST00000474843 HSPBAP1Q96EW2 488 aa6.32□□□□□ -1.4
SRRM1-210ENST00000474843 LSM14BQ9BX40 385 aaKnown RBP6.32□□□□□ -1.4
SRRM1-210ENST00000474843 BRIP1Q9BX63 1249 aa6.32□□□□□ -1.4
SRRM1-210ENST00000474843 CSRNP2Q9H175 543 aa6.32□□□□□ -1.4
SRRM1-210ENST00000474843 KLHL42Q9P2K6 505 aa6.32□□□□□ -1.4
SRRM1-210ENST00000474843 ZNF180Q9UJW8 692 aa6.32□□□□□ -1.4
SRRM1-210ENST00000474843 RUVBL1Q9Y265 456 aaKnown RBP6.32□□□□□ -1.4
SRRM1-210ENST00000474843 IPPQ9Y573 584 aa6.32□□□□□ -1.4
SRRM1-210ENST00000474843 MYH3P11055 1940 aa6.32□□□□□ -1.4
SRRM1-210ENST00000474843 EP400Q96L91 3159 aa6.32□□□□□ -1.4
SRRM1-210ENST00000474843 ADCY9O60503 1353 aa6.31□□□□□ -1.4
SRRM1-210ENST00000474843 SH3TC1Q8TE82 1336 aa6.31□□□□□ -1.4
SRRM1-210ENST00000474843 NRXN2Q9P2S2 1712 aa6.31□□□□□ -1.4
SRRM1-210ENST00000474843 IPO13O94829 963 aaKnown RBP6.31□□□□□ -1.4
SRRM1-210ENST00000474843 IGKV5-2P06315 115 aa6.31□□□□□ -1.4
SRRM1-210ENST00000474843 TRIM27P14373 513 aa6.31□□□□□ -1.4
SRRM1-210ENST00000474843 GPTP24298 496 aa6.31□□□□□ -1.4
SRRM1-210ENST00000474843 ALDH1B1P30837 517 aa6.31□□□□□ -1.4
SRRM1-210ENST00000474843 HIBADHP31937 336 aaKnown RBP6.31□□□□□ -1.4
SRRM1-210ENST00000474843 ALDH1A3P47895 512 aa6.31□□□□□ -1.4
SRRM1-210ENST00000474843 EPHB1P54762 984 aa6.31□□□□□ -1.4
SRRM1-210ENST00000474843 SPATS1Q496A3 300 aa6.31□□□□□ -1.4
SRRM1-210ENST00000474843 CATIPQ7Z7H3 387 aa6.31□□□□□ -1.4
SRRM1-210ENST00000474843 ZGPATQ8N5A5 531 aaKnown RBP6.31□□□□□ -1.4
SRRM1-210ENST00000474843 CNBD1Q8NA66 436 aa6.31□□□□□ -1.4
SRRM1-210ENST00000474843 RNF169Q8NCN4 708 aa6.31□□□□□ -1.4
SRRM1-210ENST00000474843 ST8SIA2Q92186 375 aa6.31□□□□□ -1.4
SRRM1-210ENST00000474843 DVL3Q92997 716 aaPredicted RBP6.31□□□□□ -1.4
SRRM1-210ENST00000474843 HDAC10Q969S8 669 aa6.31□□□□□ -1.4
SRRM1-210ENST00000474843 MIEF2Q96C03 454 aa6.31□□□□□ -1.4
SRRM1-210ENST00000474843 RHOBTB2Q9BYZ6 727 aa6.31□□□□□ -1.4
SRRM1-210ENST00000474843 CPEB1Q9BZB8 566 aaKnown RBP6.31□□□□□ -1.4
SRRM1-210ENST00000474843 ZIM2Q9NZV7 527 aa6.31□□□□□ -1.4
SRRM1-210ENST00000474843 ACTL7AQ9Y615 435 aa6.31□□□□□ -1.4
SRRM1-210ENST00000474843 N4BP2Q86UW6 1770 aaPredicted RBP6.31□□□□□ -1.4
SRRM1-210ENST00000474843 UTYO14607 1347 aa6.3□□□□□ -1.4
SRRM1-210ENST00000474843 CDHR2Q9BYE9 1310 aa6.3□□□□□ -1.4
SRRM1-210ENST00000474843 KIF13BQ9NQT8 1826 aa6.3□□□□□ -1.4
SRRM1-210ENST00000474843 PXDNLA1KZ92 1463 aa6.3□□□□□ -1.4
SRRM1-210ENST00000474843 H0YIN7 160 aa6.3□□□□□ -1.4
SRRM1-210ENST00000474843 GRM8O00222 908 aa6.3□□□□□ -1.4
SRRM1-210ENST00000474843 MFAP3LO75121 409 aa6.3□□□□□ -1.4
SRRM1-210ENST00000474843 GPR32O75388 356 aa6.3□□□□□ -1.4
SRRM1-210ENST00000474843 ABLIM3O94929 683 aa6.3□□□□□ -1.4
SRRM1-210ENST00000474843 PCSK1P29120 753 aa6.3□□□□□ -1.4
SRRM1-210ENST00000474843 FLT3LGP49771 235 aa6.3□□□□□ -1.4
SRRM1-210ENST00000474843 RAP2BP61225 183 aa6.3□□□□□ -1.4
SRRM1-210ENST00000474843 TARDBPQ13148 414 aaKnown RBP eCLIP6.3□□□□□ -1.4
SRRM1-210ENST00000474843 PRKD1Q15139 912 aaPredicted RBP6.3□□□□□ -1.4
SRRM1-210ENST00000474843 LRRC41Q15345 812 aa6.3□□□□□ -1.4
SRRM1-210ENST00000474843 CDSNQ15517 529 aa6.3□□□□□ -1.4
SRRM1-210ENST00000474843 SPDYAQ5MJ70 313 aa6.3□□□□□ -1.4
SRRM1-210ENST00000474843 GJC2Q5T442 439 aaPredicted RBP6.3□□□□□ -1.4
SRRM1-210ENST00000474843 AFMIDQ63HM1 303 aa6.3□□□□□ -1.4
SRRM1-210ENST00000474843 ZNF572Q7Z3I7 529 aaPredicted RBP6.3□□□□□ -1.4
SRRM1-210ENST00000474843 APBB1IPQ7Z5R6 666 aaPredicted RBP6.3□□□□□ -1.4
SRRM1-210ENST00000474843 ANKRD35Q8N283 1001 aa6.3□□□□□ -1.4
SRRM1-210ENST00000474843 SLC35B2Q8TB61 432 aa6.3□□□□□ -1.4
SRRM1-210ENST00000474843 TMX3Q96JJ7 454 aa6.3□□□□□ -1.4
SRRM1-210ENST00000474843 USP44Q9H0E7 712 aa6.3□□□□□ -1.4
SRRM1-210ENST00000474843 KCNH6Q9H252 994 aa6.3□□□□□ -1.4
SRRM1-210ENST00000474843 MANSC1Q9H8J5 431 aa6.3□□□□□ -1.4
SRRM1-210ENST00000474843 TMEM140Q9NV12 185 aa6.3□□□□□ -1.4
SRRM1-210ENST00000474843 DDX19BQ9UMR2 479 aa6.3□□□□□ -1.4
SRRM1-210ENST00000474843 GIT1Q9Y2X7 761 aa6.3□□□□□ -1.4
SRRM1-210ENST00000474843 ABCC4O15439 1325 aa6.29□□□□□ -1.4
SRRM1-210ENST00000474843 KLRG2A4D1S0 409 aaPredicted RBP6.29□□□□□ -1.4
SRRM1-210ENST00000474843 CXorf49A8MYA2 514 aaPredicted RBP6.29□□□□□ -1.4
SRRM1-210ENST00000474843 BBOX1O75936 387 aa6.29□□□□□ -1.4
SRRM1-210ENST00000474843 NTSR2O95665 410 aa6.29□□□□□ -1.4
SRRM1-210ENST00000474843 AMY1AP04745 511 aa6.29□□□□□ -1.4
SRRM1-210ENST00000474843 UBTFL1P0CB47 393 aaPredicted RBP6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms