RNA–Protein interactions for RNA: ENST00000465627.5

UBA3-208, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 1,388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-208ENST00000465627 BZW2Q9Y6E2 419 aaKnown RBP9.45□□□□□ -0.9
UBA3-208ENST00000465627 TTC3P53804 2025 aa9.44□□□□□ -0.9
UBA3-208ENST00000465627 MICAL3Q7RTP6 2002 aa9.44□□□□□ -0.9
UBA3-208ENST00000465627 DDX3XO00571 662 aaKnown RBP eCLIP9.44□□□□□ -0.9
UBA3-208ENST00000465627 PPEF2O14830 753 aa9.44□□□□□ -0.9
UBA3-208ENST00000465627 FANCGO15287 622 aa9.44□□□□□ -0.9
UBA3-208ENST00000465627 PJA2O43164 708 aa9.44□□□□□ -0.9
UBA3-208ENST00000465627 NRDCO43847 1150 aa9.44□□□□□ -0.9
UBA3-208ENST00000465627 TBXAS1P24557 533 aaPredicted RBP9.44□□□□□ -0.9
UBA3-208ENST00000465627 MSNP26038 577 aaKnown RBP9.44□□□□□ -0.9
UBA3-208ENST00000465627 LRPAP1P30533 357 aa9.44□□□□□ -0.9
UBA3-208ENST00000465627 RAB27AP51159 221 aa9.44□□□□□ -0.9
UBA3-208ENST00000465627 KLHL30Q0D2K2 578 aa9.44□□□□□ -0.9
UBA3-208ENST00000465627 SLC18A3Q16572 532 aa9.44□□□□□ -0.9
UBA3-208ENST00000465627 ST3GAL2Q16842 350 aa9.44□□□□□ -0.9
UBA3-208ENST00000465627 ARHGAP44Q17R89 818 aa9.44□□□□□ -0.9
UBA3-208ENST00000465627 TRIM60Q495X7 471 aa9.44□□□□□ -0.9
UBA3-208ENST00000465627 WDR44Q5JSH3 913 aa9.44□□□□□ -0.9
UBA3-208ENST00000465627 NOP9Q86U38 636 aaKnown RBP9.44□□□□□ -0.9
UBA3-208ENST00000465627 ECHDC2Q86YB7 292 aa9.44□□□□□ -0.9
UBA3-208ENST00000465627 GPIHBP1Q8IV16 184 aa9.44□□□□□ -0.9
UBA3-208ENST00000465627 FMNL3Q8IVF7 1028 aa9.44□□□□□ -0.9
UBA3-208ENST00000465627 LRRC52Q8N7C0 313 aa9.44□□□□□ -0.9
UBA3-208ENST00000465627 ZFP42Q96MM3 310 aa9.44□□□□□ -0.9
UBA3-208ENST00000465627 ADAM2Q99965 735 aa9.44□□□□□ -0.9
UBA3-208ENST00000465627 IFIH1Q9BYX4 1025 aaKnown RBP9.44□□□□□ -0.9
UBA3-208ENST00000465627 TRIM6Q9C030 488 aaPredicted RBP9.44□□□□□ -0.9
UBA3-208ENST00000465627 NIF3L1Q9GZT8 377 aa9.44□□□□□ -0.9
UBA3-208ENST00000465627 NKX2-4Q9H2Z4 354 aa9.44□□□□□ -0.9
UBA3-208ENST00000465627 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.44□□□□□ -0.9
UBA3-208ENST00000465627 KLK14Q9P0G3 267 aa9.44□□□□□ -0.9
UBA3-208ENST00000465627 UBQLN1Q9UMX0 589 aaKnown RBP9.44□□□□□ -0.9
UBA3-208ENST00000465627 GIT1Q9Y2X7 761 aa9.44□□□□□ -0.9
UBA3-208ENST00000465627 TDRD15B5MCY1 1934 aaKnown RBP9.43□□□□□ -0.9
UBA3-208ENST00000465627 ARL5CA6NH57 179 aa9.43□□□□□ -0.9
UBA3-208ENST00000465627 RFXAPO00287 272 aa9.43□□□□□ -0.9
UBA3-208ENST00000465627 CYP26A1O43174 497 aa9.43□□□□□ -0.9
UBA3-208ENST00000465627 PQBP1O60828 265 aaKnown RBP9.43□□□□□ -0.9
UBA3-208ENST00000465627 RNF40O75150 1001 aa9.43□□□□□ -0.9
UBA3-208ENST00000465627 PHACTR2O75167 634 aa9.43□□□□□ -0.9
UBA3-208ENST00000465627 CCDC175P0C221 793 aa9.43□□□□□ -0.9
UBA3-208ENST00000465627 POLR2BP30876 1174 aaKnown RBP9.43□□□□□ -0.9
UBA3-208ENST00000465627 SSTR3P32745 418 aaPredicted RBP9.43□□□□□ -0.9
UBA3-208ENST00000465627 CYLC1P35663 651 aaPredicted RBP9.43□□□□□ -0.9
UBA3-208ENST00000465627 YARSP54577 528 aaKnown RBP9.43□□□□□ -0.9
UBA3-208ENST00000465627 GFPT1Q06210 699 aaPredicted RBP9.43□□□□□ -0.9
UBA3-208ENST00000465627 INCA1Q0VD86 236 aa9.43□□□□□ -0.9
UBA3-208ENST00000465627 ZNF699Q32M78 642 aa9.43□□□□□ -0.9
UBA3-208ENST00000465627 GLRA4Q5JXX5 417 aa9.43□□□□□ -0.9
UBA3-208ENST00000465627 C9orf57Q5W0N0 161 aa9.43□□□□□ -0.9
UBA3-208ENST00000465627 SLC47A2Q86VL8 602 aa9.43□□□□□ -0.9
UBA3-208ENST00000465627 PALB2Q86YC2 1186 aa9.43□□□□□ -0.9
UBA3-208ENST00000465627 WHAMMQ8TF30 809 aa9.43□□□□□ -0.9
UBA3-208ENST00000465627 SLC20A1Q8WUM9 679 aa9.43□□□□□ -0.9
UBA3-208ENST00000465627 LPPQ93052 612 aa9.43□□□□□ -0.9
UBA3-208ENST00000465627 CCDC42Q96M95 316 aa9.43□□□□□ -0.9
UBA3-208ENST00000465627 PCDHB18PQ96TA0 734 aa9.43□□□□□ -0.9
UBA3-208ENST00000465627 ZSWIM1Q9BR11 485 aa9.43□□□□□ -0.9
UBA3-208ENST00000465627 LACRTQ9GZZ8 138 aa9.43□□□□□ -0.9
UBA3-208ENST00000465627 FAM124BQ9H5Z6 455 aaPredicted RBP9.43□□□□□ -0.9
UBA3-208ENST00000465627 ALG13Q9NP73 1137 aaKnown RBP9.43□□□□□ -0.9
UBA3-208ENST00000465627 ACP6Q9NPH0 428 aa9.43□□□□□ -0.9
UBA3-208ENST00000465627 TRMT1Q9NXH9 659 aaKnown RBP9.43□□□□□ -0.9
UBA3-208ENST00000465627 NAGPAQ9UK23 515 aa9.43□□□□□ -0.9
UBA3-208ENST00000465627 POLIQ9UNA4 740 aa9.43□□□□□ -0.9
UBA3-208ENST00000465627 COG5Q9UP83 839 aa9.43□□□□□ -0.9
UBA3-208ENST00000465627 NME7Q9Y5B8 376 aa9.43□□□□□ -0.9
UBA3-208ENST00000465627 TSC2P49815 1807 aa9.43□□□□□ -0.9
UBA3-208ENST00000465627 ENPP3O14638 875 aa9.42□□□□□ -0.9
UBA3-208ENST00000465627 SPTLC1O15269 473 aa9.42□□□□□ -0.9
UBA3-208ENST00000465627 TLR3O15455 904 aaKnown RBP9.42□□□□□ -0.9
UBA3-208ENST00000465627 DCXO43602 365 aa9.42□□□□□ -0.9
UBA3-208ENST00000465627 EOMESO95936 686 aa9.42□□□□□ -0.9
UBA3-208ENST00000465627 SKIP12755 728 aa9.42□□□□□ -0.9
UBA3-208ENST00000465627 ITGA4P13612 1032 aa9.42□□□□□ -0.9
UBA3-208ENST00000465627 CYP11B1P15538 503 aa9.42□□□□□ -0.9
UBA3-208ENST00000465627 ZSCAN20P17040 1043 aaPredicted RBP9.42□□□□□ -0.9
UBA3-208ENST00000465627 IGFBP6P24592 240 aaPredicted RBP9.42□□□□□ -0.9
UBA3-208ENST00000465627 MLH1P40692 756 aa9.42□□□□□ -0.9
UBA3-208ENST00000465627 VAV2P52735 878 aa9.42□□□□□ -0.9
UBA3-208ENST00000465627 RBP5P82980 135 aa9.42□□□□□ -0.9
UBA3-208ENST00000465627 FMO1Q01740 532 aa9.42□□□□□ -0.9
UBA3-208ENST00000465627 CYP27A1Q02318 531 aa9.42□□□□□ -0.9
UBA3-208ENST00000465627 ARID5AQ03989 594 aa9.42□□□□□ -0.9
UBA3-208ENST00000465627 BMS1Q14692 1282 aaKnown RBP9.42□□□□□ -0.9
UBA3-208ENST00000465627 CD300LGQ6UXG3 332 aa9.42□□□□□ -0.9
UBA3-208ENST00000465627 SLC24A5Q71RS6 500 aa9.42□□□□□ -0.9
UBA3-208ENST00000465627 DBF4BQ8NFT6 615 aa9.42□□□□□ -0.9
UBA3-208ENST00000465627 BEST2Q8NFU1 509 aa9.42□□□□□ -0.9
UBA3-208ENST00000465627 HPDLQ96IR7 371 aa9.42□□□□□ -0.9
UBA3-208ENST00000465627 GAD1Q99259 594 aa9.42□□□□□ -0.9
UBA3-208ENST00000465627 AGPAT1Q99943 283 aa9.42□□□□□ -0.9
UBA3-208ENST00000465627 APOL6Q9BWW8 343 aa9.42□□□□□ -0.9
UBA3-208ENST00000465627 FTHL17Q9BXU8 183 aa9.42□□□□□ -0.9
UBA3-208ENST00000465627 ELAC1Q9H777 363 aaKnown RBP9.42□□□□□ -0.9
UBA3-208ENST00000465627 CYP3A43Q9HB55 503 aa9.42□□□□□ -0.9
UBA3-208ENST00000465627 GDAP2Q9NXN4 497 aa9.42□□□□□ -0.9
UBA3-208ENST00000465627 PARP2Q9UGN5 583 aa9.42□□□□□ -0.9
UBA3-208ENST00000465627 ADAMTS1Q9UHI8 967 aa9.42□□□□□ -0.9
UBA3-208ENST00000465627 TFR2Q9UP52 801 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms