RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 CBWD5Q5RIA9 395 aa15.54■□□□□ 0.08
SQSTM1-205ENST00000464493 LRRTM3Q86VH5 581 aa15.54■□□□□ 0.08
SQSTM1-205ENST00000464493 CREBRFQ8IUR6 639 aa15.54■□□□□ 0.08
SQSTM1-205ENST00000464493 DCP1BQ8IZD4 617 aaKnown RBP15.54■□□□□ 0.08
SQSTM1-205ENST00000464493 ZNF707Q96C28 371 aaPredicted RBP15.54■□□□□ 0.08
SQSTM1-205ENST00000464493 NECTIN4Q96NY8 510 aa15.54■□□□□ 0.08
SQSTM1-205ENST00000464493 MRPL45Q9BRJ2 306 aaKnown RBP15.54■□□□□ 0.08
SQSTM1-205ENST00000464493 PI4K2AQ9BTU6 479 aa15.54■□□□□ 0.08
SQSTM1-205ENST00000464493 RHOBTB2Q9BYZ6 727 aa15.54■□□□□ 0.08
SQSTM1-205ENST00000464493 SNX25Q9H3E2 840 aa15.54■□□□□ 0.08
SQSTM1-205ENST00000464493 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.54■□□□□ 0.082e-8■■■■■ 31.1
SQSTM1-205ENST00000464493 ANO10Q9NW15 660 aa15.54■□□□□ 0.08
SQSTM1-205ENST00000464493 RAB20Q9NX57 234 aa15.54■□□□□ 0.08
SQSTM1-205ENST00000464493 CDH22Q9UJ99 828 aa15.54■□□□□ 0.08
SQSTM1-205ENST00000464493 MTMR11A4FU01 709 aa15.53■□□□□ 0.08
SQSTM1-205ENST00000464493 VNN2O95498 520 aa15.53■□□□□ 0.08
SQSTM1-205ENST00000464493 ACAT1P24752 427 aaKnown RBP15.53■□□□□ 0.08
SQSTM1-205ENST00000464493 LMO2P25791 158 aa15.53■□□□□ 0.08
SQSTM1-205ENST00000464493 CDH8P55286 799 aa15.53■□□□□ 0.08
SQSTM1-205ENST00000464493 SMARCB1Q12824 385 aa15.53■□□□□ 0.08
SQSTM1-205ENST00000464493 DUSP4Q13115 394 aa15.53■□□□□ 0.08
SQSTM1-205ENST00000464493 SPOPLQ6IQ16 392 aa15.53■□□□□ 0.08
SQSTM1-205ENST00000464493 TRIM59Q8IWR1 403 aa15.53■□□□□ 0.08
SQSTM1-205ENST00000464493 ATAD1Q8NBU5 361 aa15.53■□□□□ 0.08
SQSTM1-205ENST00000464493 OR6B3Q8NGW1 331 aa15.53■□□□□ 0.08
SQSTM1-205ENST00000464493 FEZF2Q8TBJ5 459 aa15.53■□□□□ 0.08
SQSTM1-205ENST00000464493 SMG7Q92540 1137 aaKnown RBP15.53■□□□□ 0.08
SQSTM1-205ENST00000464493 SEMA4DQ92854 862 aa15.53■□□□□ 0.08
SQSTM1-205ENST00000464493 PIDD1Q9HB75 910 aa15.53■□□□□ 0.08
SQSTM1-205ENST00000464493 COQ4Q9Y3A0 265 aa15.53■□□□□ 0.08
SQSTM1-205ENST00000464493 CCL16O15467 120 aa15.52■□□□□ 0.08
SQSTM1-205ENST00000464493 HCRTO43612 131 aa15.52■□□□□ 0.08
SQSTM1-205ENST00000464493 XYLBO75191 536 aa15.52■□□□□ 0.08
SQSTM1-205ENST00000464493 LRRN2O75325 713 aa15.52■□□□□ 0.08
SQSTM1-205ENST00000464493 LRG1P02750 347 aa15.52■□□□□ 0.08
SQSTM1-205ENST00000464493 PDGFRBP09619 1106 aa15.52■□□□□ 0.08
SQSTM1-205ENST00000464493 FMO5P49326 533 aa15.52■□□□□ 0.08
SQSTM1-205ENST00000464493 NOP14P78316 857 aaKnown RBP15.52■□□□□ 0.08
SQSTM1-205ENST00000464493 KCNH2Q12809 1159 aa15.52■□□□□ 0.08
SQSTM1-205ENST00000464493 NFE2Q16621 373 aaPredicted RBP15.52■□□□□ 0.08
SQSTM1-205ENST00000464493 STX1AQ16623 288 aa15.52■□□□□ 0.08
SQSTM1-205ENST00000464493 WDR44Q5JSH3 913 aa15.52■□□□□ 0.08
SQSTM1-205ENST00000464493 INTS6LQ5JSJ4 861 aaKnown RBP15.52■□□□□ 0.08
SQSTM1-205ENST00000464493 SCARA5Q6ZMJ2 495 aa15.52■□□□□ 0.08
SQSTM1-205ENST00000464493 IRF2BP1Q8IU81 584 aa15.52■□□□□ 0.08
SQSTM1-205ENST00000464493 ADAMTS19Q8TE59 1207 aa15.52■□□□□ 0.08
SQSTM1-205ENST00000464493 C2orf15Q8WU43 125 aaKnown RBP15.52■□□□□ 0.08
SQSTM1-205ENST00000464493 CNOT6LQ96LI5 555 aaKnown RBP15.52■□□□□ 0.08
SQSTM1-205ENST00000464493 PHF7Q9BWX1 381 aaPredicted RBP15.52■□□□□ 0.08
SQSTM1-205ENST00000464493 CRISPLD1Q9H336 500 aa15.52■□□□□ 0.08
SQSTM1-205ENST00000464493 THAP9Q9H5L6 903 aa15.52■□□□□ 0.08
SQSTM1-205ENST00000464493 SMYD3Q9H7B4 428 aa15.52■□□□□ 0.08
SQSTM1-205ENST00000464493 APOBEC3GQ9HC16 384 aaKnown RBP15.52■□□□□ 0.08
SQSTM1-205ENST00000464493 HSFX1Q9UBD0 423 aa15.52■□□□□ 0.08
SQSTM1-205ENST00000464493 PRKAG3Q9UGI9 489 aa15.52■□□□□ 0.08
SQSTM1-205ENST00000464493 GTF3C4Q9UKN8 822 aa15.52■□□□□ 0.08
SQSTM1-205ENST00000464493 CDH9Q9ULB4 789 aa15.52■□□□□ 0.08
SQSTM1-205ENST00000464493 SLC27A5Q9Y2P5 690 aa15.52■□□□□ 0.08
SQSTM1-205ENST00000464493 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.52■□□□□ 0.08
SQSTM1-205ENST00000464493 C2orf16Q68DN1 1984 aa15.52■□□□□ 0.07
SQSTM1-205ENST00000464493 A8MXQ7 604 aa15.51■□□□□ 0.07
SQSTM1-205ENST00000464493 PMM2O15305 246 aa15.51■□□□□ 0.07
SQSTM1-205ENST00000464493 N4BP1O75113 896 aaKnown RBP15.51■□□□□ 0.07
SQSTM1-205ENST00000464493 LETM1O95202 739 aaPredicted RBP15.51■□□□□ 0.07
SQSTM1-205ENST00000464493 POU2F2P09086 479 aa15.51■□□□□ 0.07
SQSTM1-205ENST00000464493 RAP1GAPP47736 663 aa15.51■□□□□ 0.07
SQSTM1-205ENST00000464493 CDR1P51861 262 aa15.51■□□□□ 0.07
SQSTM1-205ENST00000464493 CETN1Q12798 172 aa15.51■□□□□ 0.07
SQSTM1-205ENST00000464493 FAM171BQ6P995 826 aa15.51■□□□□ 0.07
SQSTM1-205ENST00000464493 FAM114A1Q8IWE2 563 aa15.51■□□□□ 0.07
SQSTM1-205ENST00000464493 ADHFE1Q8IWW8 467 aa15.51■□□□□ 0.07
SQSTM1-205ENST00000464493 ENOX1Q8TC92 643 aaKnown RBP15.51■□□□□ 0.07
SQSTM1-205ENST00000464493 SPPL2BQ8TCT7 592 aa15.51■□□□□ 0.07
SQSTM1-205ENST00000464493 PKMYT1Q99640 499 aa15.51■□□□□ 0.07
SQSTM1-205ENST00000464493 SYT15Q9BQS2 421 aa15.51■□□□□ 0.07
SQSTM1-205ENST00000464493 SDCBP2Q9H190 292 aa15.51■□□□□ 0.07
SQSTM1-205ENST00000464493 POMKQ9H5K3 350 aa15.51■□□□□ 0.07
SQSTM1-205ENST00000464493 WDR6Q9NNW5 1121 aaKnown RBP15.51■□□□□ 0.07
SQSTM1-205ENST00000464493 TMLHEQ9NVH6 421 aa15.51■□□□□ 0.07
SQSTM1-205ENST00000464493 PCDHB5Q9Y5E4 795 aa15.51■□□□□ 0.07
SQSTM1-205ENST00000464493 INSL5Q9Y5Q6 135 aa15.51■□□□□ 0.07
SQSTM1-205ENST00000464493 MYBPHLA2RUH7 354 aa15.5■□□□□ 0.07
SQSTM1-205ENST00000464493 P4HA2O15460 535 aa15.5■□□□□ 0.07
SQSTM1-205ENST00000464493 ATP2C2O75185 946 aa15.5■□□□□ 0.07
SQSTM1-205ENST00000464493 AFPP02771 609 aaKnown RBP15.5■□□□□ 0.07
SQSTM1-205ENST00000464493 ASPAP45381 313 aa15.5■□□□□ 0.07
SQSTM1-205ENST00000464493 ALDH1A3P47895 512 aa15.5■□□□□ 0.07
SQSTM1-205ENST00000464493 TUFMP49411 452 aaKnown RBP15.5■□□□□ 0.07
SQSTM1-205ENST00000464493 PSMC1P62191 440 aaKnown RBP15.5■□□□□ 0.07
SQSTM1-205ENST00000464493 TYRO3Q06418 890 aa15.5■□□□□ 0.07
SQSTM1-205ENST00000464493 TWF1Q12792 350 aa15.5■□□□□ 0.07
SQSTM1-205ENST00000464493 MAPRE1Q15691 268 aaKnown RBP15.5■□□□□ 0.07
SQSTM1-205ENST00000464493 SKOR2Q2VWA4 1001 aaPredicted RBP15.5■□□□□ 0.07
SQSTM1-205ENST00000464493 GRASPQ7Z6J2 395 aaPredicted RBP15.5■□□□□ 0.07
SQSTM1-205ENST00000464493 FAXDC2Q96IV6 333 aa15.5■□□□□ 0.07
SQSTM1-205ENST00000464493 UHRF1Q96T88 793 aaPredicted RBP15.5■□□□□ 0.07
SQSTM1-205ENST00000464493 BCO2Q9BYV7 579 aa15.5■□□□□ 0.07
SQSTM1-205ENST00000464493 NIF3L1Q9GZT8 377 aa15.5■□□□□ 0.07
SQSTM1-205ENST00000464493 CYP3A43Q9HB55 503 aa15.5■□□□□ 0.07
SQSTM1-205ENST00000464493 ABI2Q9NYB9 513 aaPredicted RBP15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms