RNA–Protein interactions for RNA: ENST00000447683.2

OTUB1-204, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 2

Gene OTUB1, Length 2,315 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-204ENST00000447683 SLITRK1Q96PX8 696 aa17.22■□□□□ 0.35
OTUB1-204ENST00000447683 CDC42EP4Q9H3Q1 356 aaKnown RBP17.22■□□□□ 0.35
OTUB1-204ENST00000447683 SH3BP1Q9Y3L3 701 aa17.22■□□□□ 0.35
OTUB1-204ENST00000447683 MEFVO15553 781 aaPredicted RBP17.21■□□□□ 0.35
OTUB1-204ENST00000447683 AGTP01019 485 aa17.21■□□□□ 0.35
OTUB1-204ENST00000447683 GH1P01241 217 aa17.21■□□□□ 0.35
OTUB1-204ENST00000447683 CYP2C8P10632 490 aa17.21■□□□□ 0.35
OTUB1-204ENST00000447683 ATF2P15336 505 aa17.21■□□□□ 0.35
OTUB1-204ENST00000447683 TCF4P15884 667 aa17.21■□□□□ 0.35
OTUB1-204ENST00000447683 ITGA8P53708 1063 aa17.21■□□□□ 0.35
OTUB1-204ENST00000447683 TNFAIP2Q03169 654 aa17.21■□□□□ 0.35
OTUB1-204ENST00000447683 ATP13A4Q4VNC1 1196 aa17.21■□□□□ 0.35
OTUB1-204ENST00000447683 ZNF667Q5HYK9 610 aa17.21■□□□□ 0.35
OTUB1-204ENST00000447683 DPY19L2Q6NUT2 758 aa17.21■□□□□ 0.35
OTUB1-204ENST00000447683 C1orf127Q8N9H9 656 aa17.21■□□□□ 0.35
OTUB1-204ENST00000447683 CENPTQ96BT3 561 aa17.21■□□□□ 0.35
OTUB1-204ENST00000447683 TRAIPQ9BWF2 469 aa17.21■□□□□ 0.35
OTUB1-204ENST00000447683 ROPN1BQ9BZX4 212 aaPredicted RBP17.21■□□□□ 0.35
OTUB1-204ENST00000447683 ROPN1Q9HAT0 212 aaPredicted RBP17.21■□□□□ 0.35
OTUB1-204ENST00000447683 VTA1Q9NP79 307 aa17.21■□□□□ 0.35
OTUB1-204ENST00000447683 GMNCA6NCL1 334 aa17.21■□□□□ 0.35
OTUB1-204ENST00000447683 LACTBL1A8MY62 500 aa17.21■□□□□ 0.35
OTUB1-204ENST00000447683 F8VP50 259 aa17.21■□□□□ 0.35
OTUB1-204ENST00000447683 RGS16O15492 202 aaPredicted RBP17.21■□□□□ 0.35
OTUB1-204ENST00000447683 NFICP08651 508 aa17.21■□□□□ 0.35
OTUB1-204ENST00000447683 PTPN7P35236 360 aa17.21■□□□□ 0.35
OTUB1-204ENST00000447683 GJC1P36383 396 aa17.21■□□□□ 0.35
OTUB1-204ENST00000447683 COPS2P61201 443 aa17.21■□□□□ 0.35
OTUB1-204ENST00000447683 GJC2Q5T442 439 aaPredicted RBP17.21■□□□□ 0.35
OTUB1-204ENST00000447683 DRICH1Q6PGQ1 229 aaPredicted RBP17.21■□□□□ 0.35
OTUB1-204ENST00000447683 DCUN1D2Q6PH85 259 aa17.21■□□□□ 0.35
OTUB1-204ENST00000447683 CCDC25Q86WR0 208 aa17.21■□□□□ 0.35
OTUB1-204ENST00000447683 SPATS2Q86XZ4 545 aaKnown RBP17.21■□□□□ 0.35
OTUB1-204ENST00000447683 CCDC89Q8N998 374 aa17.21■□□□□ 0.35
OTUB1-204ENST00000447683 GPRC5AQ8NFJ5 357 aa17.21■□□□□ 0.35
OTUB1-204ENST00000447683 CXorf38Q8TB03 319 aa17.21■□□□□ 0.35
OTUB1-204ENST00000447683 EMID1Q96A84 441 aaPredicted RBP17.21■□□□□ 0.35
OTUB1-204ENST00000447683 SCLT1Q96NL6 688 aa17.21■□□□□ 0.35
OTUB1-204ENST00000447683 NXF1Q9UBU9 619 aaKnown RBP17.21■□□□□ 0.35
OTUB1-204ENST00000447683 STRIP2Q9ULQ0 834 aa17.21■□□□□ 0.35
OTUB1-204ENST00000447683 COL1A2P08123 1366 aa17.21■□□□□ 0.35
OTUB1-204ENST00000447683 A0A087WZ62 844 aa17.2■□□□□ 0.34
OTUB1-204ENST00000447683 TLDC2A0PJX2 215 aa17.2■□□□□ 0.34
OTUB1-204ENST00000447683 E7EVH7 732 aa17.2■□□□□ 0.34
OTUB1-204ENST00000447683 STAG3L1P0CL83 205 aa17.2■□□□□ 0.34
OTUB1-204ENST00000447683 YBX3P16989 372 aaKnown RBP eCLIP17.2■□□□□ 0.34
OTUB1-204ENST00000447683 CHKAP35790 457 aa17.2■□□□□ 0.34
OTUB1-204ENST00000447683 MMP13P45452 471 aa17.2■□□□□ 0.34
OTUB1-204ENST00000447683 IGBP1P78318 339 aa17.2■□□□□ 0.34
OTUB1-204ENST00000447683 LACTBP83111 547 aaPredicted RBP17.2■□□□□ 0.34
OTUB1-204ENST00000447683 TRIP13Q15645 432 aaPredicted RBP17.2■□□□□ 0.34
OTUB1-204ENST00000447683 MFSD5Q6N075 450 aa17.2■□□□□ 0.34
OTUB1-204ENST00000447683 DENND1BQ6P3S1 775 aa17.2■□□□□ 0.34
OTUB1-204ENST00000447683 FAM43BQ6ZT52 329 aaPredicted RBP17.2■□□□□ 0.34
OTUB1-204ENST00000447683 BBOF1Q8ND07 529 aa17.2■□□□□ 0.34
OTUB1-204ENST00000447683 PPTC7Q8NI37 304 aa17.2■□□□□ 0.34
OTUB1-204ENST00000447683 FDXACB1Q9BRP7 624 aaPredicted RBP17.2■□□□□ 0.34
OTUB1-204ENST00000447683 PPANQ9NQ55 473 aaKnown RBP17.2■□□□□ 0.34
OTUB1-204ENST00000447683 FAM169AQ9Y6X4 670 aa17.2■□□□□ 0.34
OTUB1-204ENST00000447683 IVNS1ABPQ9Y6Y0 642 aa17.2■□□□□ 0.34
OTUB1-204ENST00000447683 CITO14578 2027 aa17.2■□□□□ 0.34
OTUB1-204ENST00000447683 KAT6AQ92794 2004 aa17.2■□□□□ 0.34
OTUB1-204ENST00000447683 ATXN2Q99700 1313 aaKnown RBP17.2■□□□□ 0.34
OTUB1-204ENST00000447683 RASGRF2O14827 1237 aa17.2■□□□□ 0.34
OTUB1-204ENST00000447683 MED7O43513 233 aa17.2■□□□□ 0.34
OTUB1-204ENST00000447683 KLRC2P26717 231 aa17.2■□□□□ 0.34
OTUB1-204ENST00000447683 ADCY8P40145 1251 aa17.2■□□□□ 0.34
OTUB1-204ENST00000447683 CDR1P51861 262 aa17.2■□□□□ 0.34
OTUB1-204ENST00000447683 RAD23BP54727 409 aa17.2■□□□□ 0.34
OTUB1-204ENST00000447683 CCNA1P78396 465 aa17.2■□□□□ 0.34
OTUB1-204ENST00000447683 PTPN20Q4JDL3 420 aa17.2■□□□□ 0.34
OTUB1-204ENST00000447683 MFSD7Q6UXD7 560 aa17.2■□□□□ 0.34
OTUB1-204ENST00000447683 EPS8L3Q8TE67 593 aaKnown RBP17.2■□□□□ 0.34
OTUB1-204ENST00000447683 RAPGEF5Q92565 580 aa17.2■□□□□ 0.34
OTUB1-204ENST00000447683 SDCBP2Q9H190 292 aa17.2■□□□□ 0.34
OTUB1-204ENST00000447683 PDZD7Q9H5P4 517 aa17.2■□□□□ 0.34
OTUB1-204ENST00000447683 ASB7Q9H672 318 aa17.2■□□□□ 0.34
OTUB1-204ENST00000447683 VRTNQ9H8Y1 702 aa17.2■□□□□ 0.34
OTUB1-204ENST00000447683 ANAPC5Q9UJX4 755 aa17.2■□□□□ 0.34
OTUB1-204ENST00000447683 KRT1P04264 644 aa17.19■□□□□ 0.34
OTUB1-204ENST00000447683 KRT19P08727 400 aa17.19■□□□□ 0.34
OTUB1-204ENST00000447683 ADORA2AP29274 412 aa17.19■□□□□ 0.34
OTUB1-204ENST00000447683 POLR2BP30876 1174 aaKnown RBP17.19■□□□□ 0.34
OTUB1-204ENST00000447683 RAP1GAPP47736 663 aa17.19■□□□□ 0.34
OTUB1-204ENST00000447683 LMNB2Q03252 620 aa17.19■□□□□ 0.34
OTUB1-204ENST00000447683 AUHQ13825 339 aaKnown RBP17.19■□□□□ 0.34
OTUB1-204ENST00000447683 WDR72Q3MJ13 1102 aa17.19■□□□□ 0.34
OTUB1-204ENST00000447683 JADE1Q6IE81 842 aa17.19■□□□□ 0.34
OTUB1-204ENST00000447683 SPOCD1Q6ZMY3 1216 aa17.19■□□□□ 0.34
OTUB1-204ENST00000447683 ZNF365Q70YC5 407 aa17.19■□□□□ 0.34
OTUB1-204ENST00000447683 UHMK1Q8TAS1 419 aaKnown RBP17.19■□□□□ 0.34
OTUB1-204ENST00000447683 KATNBL1Q9H079 304 aa17.19■□□□□ 0.34
OTUB1-204ENST00000447683 ADAM7Q9H2U9 754 aa17.19■□□□□ 0.34
OTUB1-204ENST00000447683 DDX56Q9NY93 547 aaKnown RBP17.19■□□□□ 0.34
OTUB1-204ENST00000447683 GGA2Q9UJY4 613 aa17.19■□□□□ 0.34
OTUB1-204ENST00000447683 SIGLEC16A6NMB1 481 aa17.19■□□□□ 0.34
OTUB1-204ENST00000447683 PI4K2BG5E9Z4 385 aa17.19■□□□□ 0.34
OTUB1-204ENST00000447683 LIASO43766 372 aa17.19■□□□□ 0.34
OTUB1-204ENST00000447683 TJP3O95049 919 aa17.19■□□□□ 0.34
OTUB1-204ENST00000447683 ATICP31939 592 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms