RNA–Protein interactions for RNA: ENST00000428982.4

SYNGAP1-203, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-203ENST00000428982 PHF12Q96QT6 1004 aa15.13■□□□□ 0.01
SYNGAP1-203ENST00000428982 HNRNPABQ99729 332 aaKnown RBP15.13■□□□□ 0.01
SYNGAP1-203ENST00000428982 ROPN1BQ9BZX4 212 aaPredicted RBP15.13■□□□□ 0.01
SYNGAP1-203ENST00000428982 ROPN1Q9HAT0 212 aaPredicted RBP15.13■□□□□ 0.01
SYNGAP1-203ENST00000428982 ATP9BO43861 1147 aa15.13■□□□□ 0.01
SYNGAP1-203ENST00000428982 WASHC5Q12768 1159 aa15.13■□□□□ 0.01
SYNGAP1-203ENST00000428982 SPDYCQ5MJ68 293 aa15.13■□□□□ 0.01
SYNGAP1-203ENST00000428982 TTBK2Q6IQ55 1244 aa15.13■□□□□ 0.01
SYNGAP1-203ENST00000428982 ASRGL1Q7L266 308 aa15.13■□□□□ 0.01
SYNGAP1-203ENST00000428982 MTBPQ96DY7 904 aa15.13■□□□□ 0.01
SYNGAP1-203ENST00000428982 CLIP3Q96DZ5 547 aa15.13■□□□□ 0.01
SYNGAP1-203ENST00000428982 NSMCE3Q96MG7 304 aa15.13■□□□□ 0.01
SYNGAP1-203ENST00000428982 DMTF1Q9Y222 760 aa15.13■□□□□ 0.01
SYNGAP1-203ENST00000428982 GOLGA8CPA6NN73 597 aa15.12■□□□□ 0.01
SYNGAP1-203ENST00000428982 E9PMD0 336 aa15.12■□□□□ 0.01
SYNGAP1-203ENST00000428982 KCNA4P22459 653 aa15.12■□□□□ 0.01
SYNGAP1-203ENST00000428982 MXI1P50539 228 aa15.12■□□□□ 0.01
SYNGAP1-203ENST00000428982 SMUG1Q53HV7 270 aa15.12■□□□□ 0.01
SYNGAP1-203ENST00000428982 GPC2Q8N158 579 aa15.12■□□□□ 0.01
SYNGAP1-203ENST00000428982 CKAP2Q8WWK9 683 aa15.12■□□□□ 0.01
SYNGAP1-203ENST00000428982 BAP1Q92560 729 aa15.12■□□□□ 0.01
SYNGAP1-203ENST00000428982 TRIM55Q9BYV6 548 aa15.12■□□□□ 0.01
SYNGAP1-203ENST00000428982 BLOC1S4Q9NUP1 217 aa15.12■□□□□ 0.01
SYNGAP1-203ENST00000428982 MOSPD1Q9UJG1 213 aa15.12■□□□□ 0.01
SYNGAP1-203ENST00000428982 PFASO15067 1338 aa15.12■□□□□ 0.01
SYNGAP1-203ENST00000428982 H0YGN5 161 aa15.12■□□□□ 0.01
SYNGAP1-203ENST00000428982 DDX3XO00571 662 aaKnown RBP eCLIP15.12■□□□□ 0.01
SYNGAP1-203ENST00000428982 CA4P22748 312 aa15.12■□□□□ 0.01
SYNGAP1-203ENST00000428982 SNAP25P60880 206 aa15.12■□□□□ 0.01
SYNGAP1-203ENST00000428982 SPIDRQ14159 915 aa15.12■□□□□ 0.01
SYNGAP1-203ENST00000428982 GRK7Q8WTQ7 553 aa15.12■□□□□ 0.01
SYNGAP1-203ENST00000428982 PNMA5Q96PV4 448 aa15.12■□□□□ 0.01
SYNGAP1-203ENST00000428982 MTMR9Q96QG7 549 aa15.12■□□□□ 0.01
SYNGAP1-203ENST00000428982 NPHS2Q9NP85 383 aa15.12■□□□□ 0.01
SYNGAP1-203ENST00000428982 KCNMB3Q9NPA1 279 aa15.12■□□□□ 0.01
SYNGAP1-203ENST00000428982 AASDHPPTQ9NRN7 309 aa15.12■□□□□ 0.01
SYNGAP1-203ENST00000428982 GINM1Q9NU53 330 aa15.12■□□□□ 0.01
SYNGAP1-203ENST00000428982 NFS1Q9Y697 457 aa15.12■□□□□ 0.01
SYNGAP1-203ENST00000428982 AK5Q9Y6K8 562 aa15.12■□□□□ 0.01
SYNGAP1-203ENST00000428982 DUOX1Q9NRD9 1551 aa15.12■□□□□ 0.01
SYNGAP1-203ENST00000428982 YDJCA8MPS7 323 aa15.12■□□□□ 0.01
SYNGAP1-203ENST00000428982 SMIM22K7EJ46 135 aa15.12■□□□□ 0.01
SYNGAP1-203ENST00000428982 CHMP2AO43633 222 aa15.12■□□□□ 0.01
SYNGAP1-203ENST00000428982 UCHL3P15374 230 aa15.12■□□□□ 0.01
SYNGAP1-203ENST00000428982 POLR2EP19388 210 aaKnown RBP15.12■□□□□ 0.01
SYNGAP1-203ENST00000428982 C21orf59P57076 290 aa15.12■□□□□ 0.01
SYNGAP1-203ENST00000428982 MYL7Q01449 175 aa15.12■□□□□ 0.01
SYNGAP1-203ENST00000428982 PLOD1Q02809 727 aaPredicted RBP15.12■□□□□ 0.01
SYNGAP1-203ENST00000428982 FOXD4Q12950 439 aaPredicted RBP15.12■□□□□ 0.01
SYNGAP1-203ENST00000428982 CLPPQ16740 277 aaPredicted RBP15.12■□□□□ 0.01
SYNGAP1-203ENST00000428982 RABGAP1LQ5R372 815 aa15.12■□□□□ 0.01
SYNGAP1-203ENST00000428982 MOXD1Q6UVY6 613 aa15.12■□□□□ 0.01
SYNGAP1-203ENST00000428982 ACAD11Q709F0 780 aa15.12■□□□□ 0.01
SYNGAP1-203ENST00000428982 BBOF1Q8ND07 529 aa15.12■□□□□ 0.01
SYNGAP1-203ENST00000428982 DIS3LQ8TF46 1054 aaKnown RBP15.12■□□□□ 0.01
SYNGAP1-203ENST00000428982 ZNF384Q8TF68 577 aa15.12■□□□□ 0.01
SYNGAP1-203ENST00000428982 FAM198AQ9UFP1 575 aa15.12■□□□□ 0.01
SYNGAP1-203ENST00000428982 EXOC7Q9UPT5 735 aa15.12■□□□□ 0.01
SYNGAP1-203ENST00000428982 TBX10O75333 385 aa15.11■□□□□ 0.01
SYNGAP1-203ENST00000428982 NPM3O75607 178 aaKnown RBP15.11■□□□□ 0.01
SYNGAP1-203ENST00000428982 FAM178BQ8IXR5 827 aa15.11■□□□□ 0.01
SYNGAP1-203ENST00000428982 FAM136AQ96C01 138 aa15.11■□□□□ 0.01
SYNGAP1-203ENST00000428982 ADARB2Q9NS39 739 aaKnown RBP15.11■□□□□ 0.01
SYNGAP1-203ENST00000428982 SPO11Q9Y5K1 396 aa15.11■□□□□ 0.01
SYNGAP1-203ENST00000428982 COL1A1P02452 1464 aaPredicted RBP15.11■□□□□ 0.01
SYNGAP1-203ENST00000428982 CASZ1Q86V15 1759 aa15.11■□□□□ 0.01
SYNGAP1-203ENST00000428982 ABCB4P21439 1286 aa15.11■□□□□ 0.01
SYNGAP1-203ENST00000428982 NEK3P51956 506 aa15.11■□□□□ 0.01
SYNGAP1-203ENST00000428982 KRT76Q01546 638 aa15.11■□□□□ 0.01
SYNGAP1-203ENST00000428982 ALCAMQ13740 583 aa15.11■□□□□ 0.01
SYNGAP1-203ENST00000428982 NR1D2Q14995 579 aa15.11■□□□□ 0.01
SYNGAP1-203ENST00000428982 CNGA3Q16281 694 aa15.11■□□□□ 0.01
SYNGAP1-203ENST00000428982 MTDHQ86UE4 582 aaKnown RBP15.11■□□□□ 0.01
SYNGAP1-203ENST00000428982 LPAR1Q92633 364 aa15.11■□□□□ 0.01
SYNGAP1-203ENST00000428982 TELO2Q9Y4R8 837 aa15.11■□□□□ 0.01
SYNGAP1-203ENST00000428982 ROBO3Q96MS0 1386 aa15.11■□□□□ 0.01
SYNGAP1-203ENST00000428982 CHRNA3P32297 505 aa15.11■□□□□ 0.01
SYNGAP1-203ENST00000428982 RELAQ04206 551 aa15.11■□□□□ 0.01
SYNGAP1-203ENST00000428982 PDK3Q15120 406 aa15.11■□□□□ 0.01
SYNGAP1-203ENST00000428982 KIAA1755Q5JYT7 1200 aa15.11■□□□□ 0.01
SYNGAP1-203ENST00000428982 ARHGEF16Q5VV41 709 aa15.11■□□□□ 0.01
SYNGAP1-203ENST00000428982 PCNX4Q63HM2 1172 aa15.11■□□□□ 0.01
SYNGAP1-203ENST00000428982 LRRC55Q6ZSA7 311 aa15.11■□□□□ 0.01
SYNGAP1-203ENST00000428982 A0A087X0T9 212 aa15.11■□□□□ 0.01
SYNGAP1-203ENST00000428982 SPDYE16A6NNV3 312 aaPredicted RBP15.11■□□□□ 0.01
SYNGAP1-203ENST00000428982 GIPC1O14908 333 aa15.11■□□□□ 0.01
SYNGAP1-203ENST00000428982 FAM228BP0C875 321 aa15.11■□□□□ 0.01
SYNGAP1-203ENST00000428982 HMOX2P30519 316 aa15.11■□□□□ 0.01
SYNGAP1-203ENST00000428982 CAP2P40123 477 aa15.11■□□□□ 0.01
SYNGAP1-203ENST00000428982 RAB15P59190 212 aa15.11■□□□□ 0.01
SYNGAP1-203ENST00000428982 PPP1R2P3Q6NXS1 205 aa15.11■□□□□ 0.01
SYNGAP1-203ENST00000428982 LRRC6Q86X45 466 aa15.11■□□□□ 0.01
SYNGAP1-203ENST00000428982 SFR1Q86XK3 245 aa15.11■□□□□ 0.01
SYNGAP1-203ENST00000428982 ZFPM1Q8IX07 1006 aa15.11■□□□□ 0.01
SYNGAP1-203ENST00000428982 KLHL4Q9C0H6 718 aa15.11■□□□□ 0.01
SYNGAP1-203ENST00000428982 RABGEF1Q9UJ41 708 aa15.11■□□□□ 0.01
SYNGAP1-203ENST00000428982 PTPN22Q9Y2R2 807 aa15.11■□□□□ 0.01
SYNGAP1-203ENST00000428982 ATP2A1O14983 1001 aa15.1■□□□□ 0.01
SYNGAP1-203ENST00000428982 GAS7O60861 476 aa15.1■□□□□ 0.01
SYNGAP1-203ENST00000428982 OR6B1O95007 311 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms