RNA–Protein interactions for RNA: ENST00000373779.7

PTPRU-202, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-202ENST00000373779 SV2AQ7L0J3 742 aa18.23■□□□□ 0.51
PTPRU-202ENST00000373779 ARID3BQ8IVW6 561 aaPredicted RBP18.23■□□□□ 0.51
PTPRU-202ENST00000373779 NDUFAF2Q8N183 169 aa18.23■□□□□ 0.51
PTPRU-202ENST00000373779 TMEM39BQ9GZU3 492 aa18.23■□□□□ 0.51
PTPRU-202ENST00000373779 NINJ2Q9NZG7 142 aa18.23■□□□□ 0.51
PTPRU-202ENST00000373779 SLC12A6Q9UHW9 1150 aa18.23■□□□□ 0.51
PTPRU-202ENST00000373779 LTN1O94822 1766 aa18.22■□□□□ 0.51
PTPRU-202ENST00000373779 ARHGAP10A1A4S6 786 aa18.22■□□□□ 0.51
PTPRU-202ENST00000373779 RGL2O15211 777 aa18.22■□□□□ 0.51
PTPRU-202ENST00000373779 ACADSP16219 412 aa18.22■□□□□ 0.51
PTPRU-202ENST00000373779 EFTUD2Q15029 972 aaKnown RBP eCLIP18.22■□□□□ 0.511e-6■■■■■ 38.8
PTPRU-202ENST00000373779 CCDC138Q96M89 665 aa18.22■□□□□ 0.51
PTPRU-202ENST00000373779 PAFAH2Q99487 392 aa18.22■□□□□ 0.51
PTPRU-202ENST00000373779 DNAJC18Q9H819 358 aa18.22■□□□□ 0.51
PTPRU-202ENST00000373779 DDX4Q9NQI0 724 aaKnown RBP18.22■□□□□ 0.51
PTPRU-202ENST00000373779 PAPOLAP51003 745 aaKnown RBP18.22■□□□□ 0.51
PTPRU-202ENST00000373779 SCFD2Q8WU76 684 aa18.22■□□□□ 0.51
PTPRU-202ENST00000373779 ZKSCAN4Q969J2 545 aaPredicted RBP18.22■□□□□ 0.51
PTPRU-202ENST00000373779 ASTN1O14525 1302 aa18.22■□□□□ 0.51
PTPRU-202ENST00000373779 GRAP2O75791 330 aa18.22■□□□□ 0.51
PTPRU-202ENST00000373779 SLC12A1Q13621 1099 aa18.22■□□□□ 0.51
PTPRU-202ENST00000373779 ERMARDQ5T6L9 678 aa18.22■□□□□ 0.51
PTPRU-202ENST00000373779 MTHFD1LQ6UB35 978 aa18.22■□□□□ 0.51
PTPRU-202ENST00000373779 RNF139Q8WU17 664 aa18.22■□□□□ 0.51
PTPRU-202ENST00000373779 KRT35Q92764 455 aa18.22■□□□□ 0.51
PTPRU-202ENST00000373779 PURBQ96QR8 312 aaKnown RBP18.22■□□□□ 0.51
PTPRU-202ENST00000373779 ANGPTL3Q9Y5C1 460 aa18.22■□□□□ 0.51
PTPRU-202ENST00000373779 CHEK2O96017 543 aa18.22■□□□□ 0.51
PTPRU-202ENST00000373779 STIP1P31948 543 aaKnown RBP18.22■□□□□ 0.51
PTPRU-202ENST00000373779 ELF3P78545 371 aaPredicted RBP18.22■□□□□ 0.51
PTPRU-202ENST00000373779 RSPH3Q86UC2 560 aa18.22■□□□□ 0.51
PTPRU-202ENST00000373779 IQCKQ8N0W5 287 aa18.22■□□□□ 0.51
PTPRU-202ENST00000373779 KCNK16Q96T55 309 aa18.22■□□□□ 0.51
PTPRU-202ENST00000373779 GRID1Q9ULK0 1009 aa18.22■□□□□ 0.51
PTPRU-202ENST00000373779 GSTA4O15217 222 aa18.21■□□□□ 0.51
PTPRU-202ENST00000373779 FECHP22830 423 aa18.21■□□□□ 0.51
PTPRU-202ENST00000373779 POU5F1BQ06416 359 aa18.21■□□□□ 0.51
PTPRU-202ENST00000373779 PCNX4Q63HM2 1172 aa18.21■□□□□ 0.51
PTPRU-202ENST00000373779 AADACL2Q6P093 401 aa18.21■□□□□ 0.51
PTPRU-202ENST00000373779 MTDHQ86UE4 582 aaKnown RBP18.21■□□□□ 0.51
PTPRU-202ENST00000373779 TAS2R14Q9NYV8 317 aa18.21■□□□□ 0.51
PTPRU-202ENST00000373779 ATP9BO43861 1147 aa18.21■□□□□ 0.51
PTPRU-202ENST00000373779 SLC4A1P02730 911 aa18.21■□□□□ 0.51
PTPRU-202ENST00000373779 RBP5P82980 135 aa18.21■□□□□ 0.51
PTPRU-202ENST00000373779 TBCCQ15814 346 aa18.21■□□□□ 0.51
PTPRU-202ENST00000373779 TTC8Q8TAM2 541 aa18.21■□□□□ 0.51
PTPRU-202ENST00000373779 SH3GL2Q99962 352 aa18.21■□□□□ 0.51
PTPRU-202ENST00000373779 TMEM121Q9BTD3 319 aa18.21■□□□□ 0.51
PTPRU-202ENST00000373779 KCTD10Q9H3F6 313 aa18.21■□□□□ 0.51
PTPRU-202ENST00000373779 IL18RAPO95256 599 aa18.21■□□□□ 0.51
PTPRU-202ENST00000373779 LCA5LO95447 670 aa18.21■□□□□ 0.51
PTPRU-202ENST00000373779 APOEP02649 317 aa18.21■□□□□ 0.51
PTPRU-202ENST00000373779 PYGBP11216 843 aa18.21■□□□□ 0.51
PTPRU-202ENST00000373779 PMLP29590 882 aa18.21■□□□□ 0.51
PTPRU-202ENST00000373779 OTUD4Q01804 1114 aaKnown RBP18.21■□□□□ 0.51
PTPRU-202ENST00000373779 CNGA3Q16281 694 aa18.21■□□□□ 0.51
PTPRU-202ENST00000373779 TMCO4Q5TGY1 634 aa18.21■□□□□ 0.51
PTPRU-202ENST00000373779 NOP9Q86U38 636 aaKnown RBP18.21■□□□□ 0.51
PTPRU-202ENST00000373779 C4orf19Q8IY42 314 aa18.21■□□□□ 0.51
PTPRU-202ENST00000373779 CMTM5Q96DZ9 223 aa18.21■□□□□ 0.51
PTPRU-202ENST00000373779 FAM193BQ96PV7 902 aaPredicted RBP18.21■□□□□ 0.51
PTPRU-202ENST00000373779 DCLRE1BQ9H816 532 aa18.21■□□□□ 0.51
PTPRU-202ENST00000373779 LRRC4BQ9NT99 713 aa18.21■□□□□ 0.51
PTPRU-202ENST00000373779 PIM2Q9P1W9 311 aa18.21■□□□□ 0.51
PTPRU-202ENST00000373779 TMX2Q9Y320 296 aa18.21■□□□□ 0.51
PTPRU-202ENST00000373779 ZBTB12Q9Y330 459 aaPredicted RBP18.21■□□□□ 0.51
PTPRU-202ENST00000373779 UBTFL6P0CB48 400 aaPredicted RBP18.21■□□□□ 0.51
PTPRU-202ENST00000373779 IL1RL1Q01638 556 aa18.21■□□□□ 0.51
PTPRU-202ENST00000373779 SEPT1Q8WYJ6 367 aa18.21■□□□□ 0.51
PTPRU-202ENST00000373779 AP5M1Q9H0R1 490 aa18.21■□□□□ 0.51
PTPRU-202ENST00000373779 AGO4Q9HCK5 861 aaKnown RBP18.21■□□□□ 0.51
PTPRU-202ENST00000373779 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.21■□□□□ 0.512e-8■□□□□ 10.2
PTPRU-202ENST00000373779 ORC6Q9Y5N6 252 aa18.21■□□□□ 0.51
PTPRU-202ENST00000373779 ZNF189O75820 626 aaPredicted RBP18.2■□□□□ 0.5
PTPRU-202ENST00000373779 IRF2BP2Q7Z5L9 587 aa18.2■□□□□ 0.5
PTPRU-202ENST00000373779 NAF1Q96HR8 494 aaKnown RBP18.2■□□□□ 0.5
PTPRU-202ENST00000373779 HES6Q96HZ4 224 aa18.2■□□□□ 0.5
PTPRU-202ENST00000373779 PTPN4P29074 926 aa18.2■□□□□ 0.5
PTPRU-202ENST00000373779 MROH9Q5TGP6 573 aa18.2■□□□□ 0.5
PTPRU-202ENST00000373779 KIRREL3Q8IZU9 778 aa18.2■□□□□ 0.5
PTPRU-202ENST00000373779 NRBF2Q96F24 287 aa18.2■□□□□ 0.5
PTPRU-202ENST00000373779 TMEM132DQ14C87 1099 aa18.2■□□□□ 0.5
PTPRU-202ENST00000373779 SLC4A7Q9Y6M7 1214 aa18.2■□□□□ 0.5
PTPRU-202ENST00000373779 PTK6Q13882 451 aa18.2■□□□□ 0.5
PTPRU-202ENST00000373779 FASTKD1Q53R41 847 aaKnown RBP18.2■□□□□ 0.5
PTPRU-202ENST00000373779 ATF7IP2Q5U623 682 aa18.2■□□□□ 0.5
PTPRU-202ENST00000373779 C4orf22Q6V702 233 aa18.2■□□□□ 0.5
PTPRU-202ENST00000373779 TEX2Q8IWB9 1127 aa18.2■□□□□ 0.5
PTPRU-202ENST00000373779 TTYH3Q9C0H2 523 aa18.2■□□□□ 0.5
PTPRU-202ENST00000373779 GYS1P13807 737 aa18.2■□□□□ 0.5
PTPRU-202ENST00000373779 TRADDQ15628 312 aa18.2■□□□□ 0.5
PTPRU-202ENST00000373779 GRIK5Q16478 980 aa18.2■□□□□ 0.5
PTPRU-202ENST00000373779 LRRC6Q86X45 466 aa18.2■□□□□ 0.5
PTPRU-202ENST00000373779 SHOX2O60902 331 aaPredicted RBP18.19■□□□□ 0.5
PTPRU-202ENST00000373779 SULT1E1P49888 294 aa18.19■□□□□ 0.5
PTPRU-202ENST00000373779 YWHAHQ04917 246 aaPredicted RBP18.19■□□□□ 0.5
PTPRU-202ENST00000373779 TRIP10Q15642 601 aa18.19■□□□□ 0.5
PTPRU-202ENST00000373779 KCNV1Q6PIU1 500 aa18.19■□□□□ 0.5
PTPRU-202ENST00000373779 APOBEC3FQ8IUX4 373 aaKnown RBP18.19■□□□□ 0.5
PTPRU-202ENST00000373779 APLFQ8IW19 511 aaPredicted RBP18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms