RNA–Protein interactions for RNA: ENST00000298537.11

SDCCAG3-201, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best) BASIC

Gene SDCCAG3, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-201ENST00000298537 ZNF618Q5T7W0 954 aa27.19■■□□□ 1.94
SDCCAG3-201ENST00000298537 APBB1IPQ7Z5R6 666 aaPredicted RBP27.19■■□□□ 1.94
SDCCAG3-201ENST00000298537 DDX42Q86XP3 938 aaKnown RBP eCLIP27.19■■□□□ 1.94
SDCCAG3-201ENST00000298537 BEST2Q8NFU1 509 aa27.19■■□□□ 1.94
SDCCAG3-201ENST00000298537 IFT81Q8WYA0 676 aa27.19■■□□□ 1.94
SDCCAG3-201ENST00000298537 DERAQ9Y315 318 aa27.19■■□□□ 1.94
SDCCAG3-201ENST00000298537 TRPV2Q9Y5S1 764 aa27.19■■□□□ 1.94
SDCCAG3-201ENST00000298537 CCDC66A2RUB6 948 aa27.19■■□□□ 1.94
SDCCAG3-201ENST00000298537 GJC1P36383 396 aa27.19■■□□□ 1.94
SDCCAG3-201ENST00000298537 TNNT3P45378 269 aaPredicted RBP27.19■■□□□ 1.94
SDCCAG3-201ENST00000298537 CDR1P51861 262 aa27.19■■□□□ 1.94
SDCCAG3-201ENST00000298537 INCA1Q0VD86 236 aa27.19■■□□□ 1.94
SDCCAG3-201ENST00000298537 SENP6Q9GZR1 1112 aaPredicted RBP27.19■■□□□ 1.94
SDCCAG3-201ENST00000298537 GDF3Q9NR23 364 aa27.19■■□□□ 1.94
SDCCAG3-201ENST00000298537 PARVAQ9NVD7 372 aa27.19■■□□□ 1.94
SDCCAG3-201ENST00000298537 GOLGA8SH3BPF8 625 aa27.18■■□□□ 1.94
SDCCAG3-201ENST00000298537 TTI1O43156 1089 aa27.18■■□□□ 1.94
SDCCAG3-201ENST00000298537 RPS6KA5O75582 802 aa27.18■■□□□ 1.94
SDCCAG3-201ENST00000298537 STAU1O95793 577 aaKnown RBP27.18■■□□□ 1.94
SDCCAG3-201ENST00000298537 P4HA1P13674 534 aa27.18■■□□□ 1.94
SDCCAG3-201ENST00000298537 IBSPP21815 317 aaPredicted RBP27.18■■□□□ 1.94
SDCCAG3-201ENST00000298537 MYO1EQ12965 1108 aa27.18■■□□□ 1.94
SDCCAG3-201ENST00000298537 AENQ8WTP8 325 aaKnown RBP27.18■■□□□ 1.94
SDCCAG3-201ENST00000298537 LPPQ93052 612 aa27.18■■□□□ 1.94
SDCCAG3-201ENST00000298537 TRMT13Q9NUP7 481 aaKnown RBP27.18■■□□□ 1.94
SDCCAG3-201ENST00000298537 NFU1Q9UMS0 254 aa27.18■■□□□ 1.94
SDCCAG3-201ENST00000298537 WDR3Q9UNX4 943 aaKnown RBP eCLIP27.18■■□□□ 1.94
SDCCAG3-201ENST00000298537 M0QYV0 167 aa27.18■■□□□ 1.94
SDCCAG3-201ENST00000298537 RWDD2BP57060 319 aa27.18■■□□□ 1.94
SDCCAG3-201ENST00000298537 NKX3-2P78367 333 aa27.18■■□□□ 1.94
SDCCAG3-201ENST00000298537 MRPL47Q9HD33 250 aaKnown RBP27.18■■□□□ 1.94
SDCCAG3-201ENST00000298537 TMEM191CA6NGB0 347 aa27.17■■□□□ 1.94
SDCCAG3-201ENST00000298537 PTGESO14684 152 aa27.17■■□□□ 1.94
SDCCAG3-201ENST00000298537 ERBB2P04626 1255 aa27.17■■□□□ 1.94
SDCCAG3-201ENST00000298537 FAM153BP0C7A2 387 aa27.17■■□□□ 1.94
SDCCAG3-201ENST00000298537 THPOP40225 353 aa27.17■■□□□ 1.94
SDCCAG3-201ENST00000298537 FAM153CQ494X1 144 aa27.17■■□□□ 1.94
SDCCAG3-201ENST00000298537 ATP13A4Q4VNC1 1196 aa27.17■■□□□ 1.94
SDCCAG3-201ENST00000298537 ANKS1BQ7Z6G8 1248 aa27.17■■□□□ 1.94
SDCCAG3-201ENST00000298537 ACOT1Q86TX2 421 aa27.17■■□□□ 1.94
SDCCAG3-201ENST00000298537 PRELID2Q8N945 189 aa27.17■■□□□ 1.94
SDCCAG3-201ENST00000298537 DDX27Q96GQ7 796 aaKnown RBP27.17■■□□□ 1.94
SDCCAG3-201ENST00000298537 DPEP3Q9H4B8 488 aa27.17■■□□□ 1.94
SDCCAG3-201ENST00000298537 KLHL11Q9NVR0 708 aa27.17■■□□□ 1.94
SDCCAG3-201ENST00000298537 FAM153AQ9UHL3 310 aa27.17■■□□□ 1.94
SDCCAG3-201ENST00000298537 F8VP50 259 aa27.17■■□□□ 1.94
SDCCAG3-201ENST00000298537 MGAT3Q09327 533 aa27.17■■□□□ 1.94
SDCCAG3-201ENST00000298537 PTGISQ16647 500 aa27.17■■□□□ 1.94
SDCCAG3-201ENST00000298537 SOWAHAQ2M3V2 549 aa27.17■■□□□ 1.94
SDCCAG3-201ENST00000298537 PPP1R15BQ5SWA1 713 aa27.17■■□□□ 1.94
SDCCAG3-201ENST00000298537 DNAJC24Q6P3W2 148 aa27.17■■□□□ 1.94
SDCCAG3-201ENST00000298537 HDXQ7Z353 690 aa27.17■■□□□ 1.94
SDCCAG3-201ENST00000298537 JOSD2Q8TAC2 188 aa27.17■■□□□ 1.94
SDCCAG3-201ENST00000298537 UBQLN1Q9UMX0 589 aaKnown RBP27.17■■□□□ 1.94
SDCCAG3-201ENST00000298537 SCINQ9Y6U3 715 aa27.17■■□□□ 1.94
SDCCAG3-201ENST00000298537 CASP8AP2Q9UKL3 1982 aa27.16■■□□□ 1.94
SDCCAG3-201ENST00000298537 THSD7BQ9C0I4 1608 aa27.16■■□□□ 1.94
SDCCAG3-201ENST00000298537 M0QZ92 97 aa27.16■■□□□ 1.94
SDCCAG3-201ENST00000298537 CALB1P05937 261 aa27.16■■□□□ 1.94
SDCCAG3-201ENST00000298537 MCM3P25205 808 aa27.16■■□□□ 1.94
SDCCAG3-201ENST00000298537 XKR4Q5GH76 650 aa27.16■■□□□ 1.94
SDCCAG3-201ENST00000298537 SEL1L2Q5TEA6 688 aa27.16■■□□□ 1.94
SDCCAG3-201ENST00000298537 C18orf8Q96DM3 657 aa27.16■■□□□ 1.94
SDCCAG3-201ENST00000298537 FAXDC2Q96IV6 333 aa27.16■■□□□ 1.94
SDCCAG3-201ENST00000298537 TRIM51Q9BSJ1 452 aa27.16■■□□□ 1.94
SDCCAG3-201ENST00000298537 ZNF518BQ9C0D4 1074 aa27.16■■□□□ 1.94
SDCCAG3-201ENST00000298537 LHX5Q9H2C1 402 aa27.16■■□□□ 1.94
SDCCAG3-201ENST00000298537 FAM49BQ9NUQ9 324 aa27.16■■□□□ 1.94
SDCCAG3-201ENST00000298537 CEP83Q9Y592 693 aa27.16■■□□□ 1.94
SDCCAG3-201ENST00000298537 CCDC188H7C350 402 aa27.16■■□□□ 1.94
SDCCAG3-201ENST00000298537 TULP2O00295 520 aa27.16■■□□□ 1.94
SDCCAG3-201ENST00000298537 PIRO00625 290 aa27.16■■□□□ 1.94
SDCCAG3-201ENST00000298537 MED7O43513 233 aa27.16■■□□□ 1.94
SDCCAG3-201ENST00000298537 GPD2P43304 727 aa27.16■■□□□ 1.94
SDCCAG3-201ENST00000298537 SSR1P43307 286 aaKnown RBP27.16■■□□□ 1.94
SDCCAG3-201ENST00000298537 FGFR1P11362 822 aa27.15■■□□□ 1.94
SDCCAG3-201ENST00000298537 SIX1Q15475 284 aaPredicted RBP27.15■■□□□ 1.94
SDCCAG3-201ENST00000298537 TXNRD3NBQ6F5E7 133 aa27.15■■□□□ 1.94
SDCCAG3-201ENST00000298537 TTC27Q6P3X3 843 aa27.15■■□□□ 1.94
SDCCAG3-201ENST00000298537 SLC13A5Q86YT5 568 aaPredicted RBP27.15■■□□□ 1.94
SDCCAG3-201ENST00000298537 KRT222Q8N1A0 295 aa27.15■■□□□ 1.94
SDCCAG3-201ENST00000298537 NT5C1AQ9BXI3 368 aa27.15■■□□□ 1.94
SDCCAG3-201ENST00000298537 TSPAN16Q9UKR8 245 aa27.15■■□□□ 1.94
SDCCAG3-201ENST00000298537 ATP8B1O43520 1251 aa27.15■■□□□ 1.94
SDCCAG3-201ENST00000298537 SGO2Q562F6 1265 aa27.15■■□□□ 1.94
SDCCAG3-201ENST00000298537 PPP1R26Q5T8A7 1209 aaPredicted RBP27.15■■□□□ 1.94
SDCCAG3-201ENST00000298537 MAP3K21Q5TCX8 1036 aa27.15■■□□□ 1.94
SDCCAG3-201ENST00000298537 SND1Q7KZF4 910 aaKnown RBP eCLIP27.15■■□□□ 1.94
SDCCAG3-201ENST00000298537 EMC1Q8N766 993 aa27.15■■□□□ 1.94
SDCCAG3-201ENST00000298537 PDCD11Q14690 1871 aaKnown RBP27.14■■□□□ 1.94
SDCCAG3-201ENST00000298537 HMGCRP04035 888 aa27.14■■□□□ 1.94
SDCCAG3-201ENST00000298537 PFKMP08237 780 aa27.14■■□□□ 1.94
SDCCAG3-201ENST00000298537 RARAP10276 462 aa27.14■■□□□ 1.94
SDCCAG3-201ENST00000298537 GHRP10912 638 aa27.14■■□□□ 1.94
SDCCAG3-201ENST00000298537 VDRP11473 427 aa27.14■■□□□ 1.94
SDCCAG3-201ENST00000298537 KCNE1P15382 129 aa27.14■■□□□ 1.94
SDCCAG3-201ENST00000298537 CD52P31358 61 aa27.14■■□□□ 1.94
SDCCAG3-201ENST00000298537 RFC1P35251 1148 aaPredicted RBP27.14■■□□□ 1.94
SDCCAG3-201ENST00000298537 DCUN1D2Q6PH85 259 aa27.14■■□□□ 1.94
SDCCAG3-201ENST00000298537 GSTCDQ8NEC7 633 aa27.14■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms