RNA–Protein interactions for RNA: ENSMUST00000023352.8

Prkdc-201, Transcript of DNA-dependent protein kinase catalytic subunit, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Prkdc, Length 12,647 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prkdc-201ENSMUST00000023352 Spaca1Q9DA48 305 aa4.75□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Serpinb9bQ9DAV6 377 aa4.75□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Gm7168A0AUV4 508 aa4.75□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Gm4985A2ALC6 410 aa4.75□□□□□ -1.65
Prkdc-201ENSMUST00000023352 FancfE9Q5Z5 343 aa4.75□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Gm4841E9QAA8 417 aa4.75□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Msh3P13705 1091 aa4.75□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Psmb9P28076 219 aa4.75□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Msr1P30204 458 aaKnown RBP4.75□□□□□ -1.65
Prkdc-201ENSMUST00000023352 YwhahP68510 246 aaKnown RBP4.75□□□□□ -1.65
Prkdc-201ENSMUST00000023352 ItkQ03526 625 aa4.75□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Creb3Q61817 404 aa4.75□□□□□ -1.65
Prkdc-201ENSMUST00000023352 N4bp1Q6A037 893 aa4.75□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Mapre3Q6PER3 281 aa4.75□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Sgo2Q7TSY8 1164 aa4.75□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Usp20Q8C6M1 916 aa4.75□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Trim32Q8CH72 655 aa4.75□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Traf7Q922B6 594 aa4.75□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Map1bP14873 2464 aaKnown RBP4.75□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Itpripl1A2ASA8 547 aa4.75□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Fam47eD3YWC7 402 aa4.75□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Pdk4O70571 412 aa4.75□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Snai1Q02085 264 aa4.75□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Dnal1Q05A62 190 aa4.75□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Ag2Q3UPL5 249 aa4.75□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Caprin1Q60865 707 aaKnown RBP4.75□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Dna2Q6ZQJ5 1062 aa4.75□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Moxd2Q7TT41 619 aa4.75□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Fbxo44Q8BK26 255 aa4.75□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Slc38a7Q8BWH0 463 aa4.75□□□□□ -1.65
Prkdc-201ENSMUST00000023352 4930504O13RikQ8C5Z9 145 aa4.75□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Dusp19Q8K4T5 220 aa4.75□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Atp5f1Q9CQQ7 256 aaKnown RBP4.75□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Trip4Q9QXN3 581 aa4.75□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Znfx1Q8R151 1909 aaKnown RBP4.75□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Gm20911A0A087WSS0 222 aa4.75□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Gm10436L7N1Y3 520 aa4.75□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Klra1P20937 262 aa4.75□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Plekhf1Q3TB82 279 aa4.75□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Nr1h4Q60641 488 aa4.75□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Nqo1Q64669 274 aa4.75□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Usp27Q8CEG8 438 aa4.75□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Art3Q8R2G4 371 aa4.75□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Gins4Q99LZ3 223 aa4.75□□□□□ -1.65
Prkdc-201ENSMUST00000023352 RalbQ9JIW9 206 aa4.75□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Tjp2Q9Z0U1 1167 aaKnown RBP4.75□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Pold2O35654 469 aa4.75□□□□□ -1.65
Prkdc-201ENSMUST00000023352 S100a6P14069 89 aa4.75□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Prox1P48437 737 aa4.75□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Psg29Q3URN6 468 aa4.75□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Nell2Q61220 819 aa4.75□□□□□ -1.65
Prkdc-201ENSMUST00000023352 PnocQ64387 187 aa4.75□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Lurap1lQ8K2P1 221 aa4.75□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Lars2Q8VDC0 902 aa4.75□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Hdac11Q91WA3 347 aa4.75□□□□□ -1.65
Prkdc-201ENSMUST00000023352 NenfQ9CQ45 171 aa4.75□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Ist1Q9CX00 362 aa4.75□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Lrp2bpQ9D4C6 346 aa4.75□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Kank3Q9Z1P7 791 aa4.75□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Lzts3A2AHG0 700 aa4.75□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Gm3636E9Q5P1 227 aa4.75□□□□□ -1.65
Prkdc-201ENSMUST00000023352 MntO08789 591 aa4.75□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Il27raO70394 623 aa4.75□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Krt10P02535 570 aa4.75□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Rrm1P07742 792 aa4.75□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Sox6P40645 827 aa4.75□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Rhbdl3P58873 404 aa4.75□□□□□ -1.65
Prkdc-201ENSMUST00000023352 1700013D24RikQ0P521 120 aa4.75□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Slc24a2Q14BI1 711 aa4.75□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Ube2q1Q7TSS2 422 aa4.75□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Tspan18Q80WR1 248 aa4.75□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Slc44a2Q8BY89 706 aa4.75□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Ccdc63Q8CDV6 558 aa4.75□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Tspan14Q8QZY6 270 aa4.75□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Upb1Q8VC97 393 aa4.75□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Scrn2Q8VCA8 425 aa4.75□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Mfsd5Q921Y4 450 aa4.75□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Cib4Q9D9N5 185 aa4.75□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Stk4Q9JI11 487 aa4.75□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Tsc22d3Q9Z2S7 137 aa4.75□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Zfp277E9Q6D6 583 aaKnown RBP4.75□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Serpinb9O08797 374 aa4.75□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Apoa4P06728 395 aa4.75□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Ccna2P51943 422 aaKnown RBP4.75□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Kcna2P63141 499 aa4.75□□□□□ -1.65
Prkdc-201ENSMUST00000023352 IqcmQ149I8 489 aa4.75□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Igflr1Q3U4N7 345 aa4.75□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Fdxacb1Q3UY23 622 aa4.75□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Tnfaip2Q61333 691 aa4.75□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Pacs1Q8K212 961 aa4.75□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Fbxw7Q8VBV4 629 aa4.75□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Psip1Q99JF8 528 aaKnown RBP4.75□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Tdrd1Q99MV1 1172 aa4.75□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Arhgef25Q9CWR0 618 aa4.75□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Copg2Q9QXK3 871 aa4.75□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Patl2A2ARM1 529 aa4.75□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Ccnb1ip1D3Z3K2 276 aa4.75□□□□□ -1.65
Prkdc-201ENSMUST00000023352 PtenO08586 403 aa4.75□□□□□ -1.65
Prkdc-201ENSMUST00000023352 H2-M9O19442 342 aa4.75□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Q66JV7 365 aa4.75□□□□□ -1.65
Retrieved 100 of 22,080 RNA–protein pairs in 29 ms