RNA–Protein interactions for RNA: YPL177C

CUP9, Transcript of Homeodomain-containing transcriptional repressor, yeastyeast

Gene CUP9, Length 921 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUP9YPL177C YFL019CP43576 117 aa1.4□□□□□ -2.19
CUP9YPL177C GPI14P47088 403 aaKnown RBP1.4□□□□□ -2.19
CUP9YPL177C HSK3P69852 69 aa1.4□□□□□ -2.19
CUP9YPL177C VPS71Q03433 280 aa1.4□□□□□ -2.19
CUP9YPL177C SHH3Q04487 196 aa1.4□□□□□ -2.19
CUP9YPL177C IRC23Q08416 157 aa1.4□□□□□ -2.19
CUP9YPL177C YLR053CQ12026 108 aa1.4□□□□□ -2.19
CUP9YPL177C DGK1Q12382 290 aa1.4□□□□□ -2.19
CUP9YPL177C RDI1Q12434 202 aa1.4□□□□□ -2.19
CUP9YPL177C MDM35O60200 86 aa1.39□□□□□ -2.19
CUP9YPL177C VAR1P02381 398 aa1.39□□□□□ -2.19
CUP9YPL177C AQY2P0CD90 149 aa1.39□□□□□ -2.19
CUP9YPL177C UBC6P33296 250 aaPredicted RBP1.39□□□□□ -2.19
CUP9YPL177C EDC3P39998 551 aaKnown RBP1.39□□□□□ -2.19
CUP9YPL177C YAE1P47118 141 aaPredicted RBP1.39□□□□□ -2.19
CUP9YPL177C TTI2P47168 421 aa1.39□□□□□ -2.19
CUP9YPL177C YMR295CQ03559 197 aa1.39□□□□□ -2.19
CUP9YPL177C RNH202Q05635 350 aa1.39□□□□□ -2.19
CUP9YPL177C NSL1Q12143 216 aa1.39□□□□□ -2.19
CUP9YPL177C TIR1P10863 254 aa1.38□□□□□ -2.19
CUP9YPL177C YHL018WP38744 120 aaPredicted RBP1.38□□□□□ -2.19
CUP9YPL177C XPT1P47165 209 aa1.38□□□□□ -2.19
CUP9YPL177C SOL1P50278 321 aa1.38□□□□□ -2.19
CUP9YPL177C YGL235WP53071 178 aa1.38□□□□□ -2.19
CUP9YPL177C RCE1Q03530 315 aa1.38□□□□□ -2.19
CUP9YPL177C FAS1P07149 2051 aaKnown RBP1.38□□□□□ -2.19
CUP9YPL177C RPS28BP0C0X0 67 aaKnown RBP1.37□□□□□ -2.19
CUP9YPL177C PHO85P17157 305 aa1.37□□□□□ -2.19
CUP9YPL177C IDP1P21954 428 aaKnown RBP1.37□□□□□ -2.19
CUP9YPL177C FIG1P38224 298 aa1.37□□□□□ -2.19
CUP9YPL177C DER1P38307 211 aa1.37□□□□□ -2.19
CUP9YPL177C SPC25P40014 221 aa1.37□□□□□ -2.19
CUP9YPL177C NSA2P40078 261 aaKnown RBP1.37□□□□□ -2.19
CUP9YPL177C YNL200CP40165 246 aaKnown RBP1.37□□□□□ -2.19
CUP9YPL177C HYR1P40581 163 aaKnown RBP1.37□□□□□ -2.19
CUP9YPL177C YFH7P43591 353 aa1.37□□□□□ -2.19
CUP9YPL177C FIT2Q08906 153 aa1.37□□□□□ -2.19
CUP9YPL177C DAS2Q12084 232 aa1.37□□□□□ -2.19
CUP9YPL177C RPS28AQ3E7X9 67 aaPredicted RBP1.37□□□□□ -2.19
CUP9YPL177C NSP1P14907 823 aaKnown RBP1.36□□□□□ -2.19
CUP9YPL177C YCR023CP25351 611 aa1.36□□□□□ -2.19
CUP9YPL177C PAM17P36147 197 aa1.36□□□□□ -2.19
CUP9YPL177C YEL067CP39978 195 aa1.36□□□□□ -2.19
CUP9YPL177C CUP9P41817 306 aa1.36□□□□□ -2.19
CUP9YPL177C YGL101WP53144 215 aa1.36□□□□□ -2.19
CUP9YPL177C TMA20P89886 181 aaPredicted RBP1.36□□□□□ -2.19
CUP9YPL177C MAK3Q03503 176 aa1.36□□□□□ -2.19
CUP9YPL177C THI74Q04083 370 aa1.36□□□□□ -2.19
CUP9YPL177C GAL83Q04739 417 aa1.36□□□□□ -2.19
CUP9YPL177C YMR253CQ04835 414 aa1.36□□□□□ -2.19
CUP9YPL177C YPR127WQ06494 345 aa1.36□□□□□ -2.19
CUP9YPL177C PRP11Q07350 266 aaPredicted RBP1.36□□□□□ -2.19
CUP9YPL177C FYV12Q08559 129 aa1.36□□□□□ -2.19
CUP9YPL177C ATP20Q12233 115 aa1.36□□□□□ -2.19
CUP9YPL177C COX8P04039 78 aa1.35□□□□□ -2.19
CUP9YPL177C CPR5P35176 225 aa1.35□□□□□ -2.19
CUP9YPL177C CSH1P38287 376 aa1.35□□□□□ -2.19
CUP9YPL177C YFL065CP43539 102 aa1.35□□□□□ -2.19
CUP9YPL177C SBH1P52870 82 aa1.35□□□□□ -2.19
CUP9YPL177C YNL033WP53964 284 aa1.35□□□□□ -2.19
CUP9YPL177C DAD4P69851 72 aa1.35□□□□□ -2.19
CUP9YPL177C CWC27Q02770 301 aa1.35□□□□□ -2.19
CUP9YPL177C DIG2Q03373 323 aaKnown RBP1.35□□□□□ -2.19
CUP9YPL177C YPR013CQ12145 317 aa1.35□□□□□ -2.19
CUP9YPL177C YOR214CQ12282 236 aa1.35□□□□□ -2.19
CUP9YPL177C EFG1Q3E705 233 aaKnown RBP1.35□□□□□ -2.19
CUP9YPL177C YLR422WQ06409 1932 aa1.34□□□□□ -2.19
CUP9YPL177C NUF2P33895 451 aa1.34□□□□□ -2.19
CUP9YPL177C YHL042WP38729 150 aa1.34□□□□□ -2.19
CUP9YPL177C FYV4P38783 130 aaPredicted RBP1.34□□□□□ -2.19
CUP9YPL177C TIM13P53299 105 aa1.34□□□□□ -2.19
CUP9YPL177C YDR476CQ03362 224 aa1.34□□□□□ -2.19
CUP9YPL177C YMR252CQ04814 134 aa1.34□□□□□ -2.19
CUP9YPL177C UBI4P0CG63 381 aaKnown RBP1.33□□□□□ -2.2
CUP9YPL177C YHR212W-AP0CX91 67 aa1.33□□□□□ -2.2
CUP9YPL177C STP22P25604 385 aa1.33□□□□□ -2.2
CUP9YPL177C RRT1P38192 103 aa1.33□□□□□ -2.2
CUP9YPL177C GLR1P41921 483 aaKnown RBP1.33□□□□□ -2.2
CUP9YPL177C SBH2P52871 88 aa1.33□□□□□ -2.2
CUP9YPL177C YKR005CQ02203 525 aa1.33□□□□□ -2.2
CUP9YPL177C YLR046CQ12253 270 aa1.33□□□□□ -2.2
CUP9YPL177C YCL042WP25572 119 aa1.32□□□□□ -2.2
CUP9YPL177C HSP30P25619 332 aa1.32□□□□□ -2.2
CUP9YPL177C BUB2P26448 306 aaPredicted RBP1.32□□□□□ -2.2
CUP9YPL177C YEL008WP40001 126 aa1.32□□□□□ -2.2
CUP9YPL177C SOK1P40317 901 aa1.32□□□□□ -2.2
CUP9YPL177C THG1P53215 237 aaKnown RBP1.32□□□□□ -2.2
CUP9YPL177C ORM1P53224 222 aa1.32□□□□□ -2.2
CUP9YPL177C LSM3P57743 89 aaKnown RBP1.32□□□□□ -2.2
CUP9YPL177C VPS28Q02767 242 aa1.32□□□□□ -2.2
CUP9YPL177C YPR202WQ08993 238 aa1.32□□□□□ -2.2
CUP9YPL177C PET20Q99373 253 aa1.32□□□□□ -2.2
CUP9YPL177C RAD6P06104 172 aa1.31□□□□□ -2.2
CUP9YPL177C PBI2P0CT04 75 aaKnown RBP1.31□□□□□ -2.2
CUP9YPL177C SFK1P35735 353 aa1.31□□□□□ -2.2
CUP9YPL177C SLM6P38343 150 aa1.31□□□□□ -2.2
CUP9YPL177C HPA3P39979 161 aa1.31□□□□□ -2.2
CUP9YPL177C DLS1P40366 167 aa1.31□□□□□ -2.2
CUP9YPL177C APQ12P40532 138 aa1.31□□□□□ -2.2
CUP9YPL177C MOG1P47123 218 aa1.31□□□□□ -2.2
Retrieved 100 of 5,963 RNA–protein pairs in 17.5 ms