RNA–Protein interactions for RNA: YOR247W

SRL1, Transcript of Mannoprotein that exhibits a tight association with the cell wall, yeastyeast

Gene SRL1, Length 633 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRL1YOR247W SBH2P52871 88 aa1.93□□□□□ -2.1
SRL1YOR247W YPR127WQ06494 345 aa1.93□□□□□ -2.1
SRL1YOR247W IRC23Q08416 157 aa1.93□□□□□ -2.1
SRL1YOR247W YOR214CQ12282 236 aa1.93□□□□□ -2.1
SRL1YOR247W PBI2P0CT04 75 aaKnown RBP1.92□□□□□ -2.1
SRL1YOR247W SEC11P15367 167 aa1.92□□□□□ -2.1
SRL1YOR247W BUB2P26448 306 aaPredicted RBP1.92□□□□□ -2.1
SRL1YOR247W GLR1P41921 483 aaKnown RBP1.92□□□□□ -2.1
SRL1YOR247W YFR054CP43622 192 aa1.92□□□□□ -2.1
SRL1YOR247W YGL101WP53144 215 aa1.92□□□□□ -2.1
SRL1YOR247W VPS28Q02767 242 aa1.92□□□□□ -2.1
SRL1YOR247W YPR174CQ06616 221 aaPredicted RBP1.92□□□□□ -2.1
SRL1YOR247W STP22P25604 385 aa1.91□□□□□ -2.1
SRL1YOR247W HSP30P25619 332 aa1.91□□□□□ -2.1
SRL1YOR247W PAM17P36147 197 aa1.91□□□□□ -2.1
SRL1YOR247W DIG2Q03373 323 aaKnown RBP1.91□□□□□ -2.1
SRL1YOR247W THI74Q04083 370 aa1.91□□□□□ -2.1
SRL1YOR247W DAS2Q12084 232 aa1.91□□□□□ -2.1
SRL1YOR247W EFG1Q3E705 233 aaKnown RBP1.91□□□□□ -2.1
SRL1YOR247W FLO9P39712 1322 aa1.91□□□□□ -2.1
SRL1YOR247W YNL033WP53964 284 aa1.9□□□□□ -2.11
SRL1YOR247W YKR005CQ02203 525 aa1.9□□□□□ -2.11
SRL1YOR247W GAL83Q04739 417 aa1.9□□□□□ -2.11
SRL1YOR247W YPR013CQ12145 317 aa1.9□□□□□ -2.11
SRL1YOR247W ATP20Q12233 115 aa1.9□□□□□ -2.11
SRL1YOR247W RAD6P06104 172 aa1.89□□□□□ -2.11
SRL1YOR247W YCR023CP25351 611 aa1.89□□□□□ -2.11
SRL1YOR247W SFK1P35735 353 aa1.89□□□□□ -2.11
SRL1YOR247W SRP102P36057 244 aaPredicted RBP1.89□□□□□ -2.11
SRL1YOR247W YPL073CP40323 161 aa1.89□□□□□ -2.11
SRL1YOR247W SOL1P50278 321 aa1.89□□□□□ -2.11
SRL1YOR247W LSM3P57743 89 aaKnown RBP1.89□□□□□ -2.11
SRL1YOR247W YHR007C-AQ07074 71 aa1.89□□□□□ -2.11
SRL1YOR247W FYV12Q08559 129 aa1.89□□□□□ -2.11
SRL1YOR247W PET20Q99373 253 aa1.89□□□□□ -2.11
SRL1YOR247W UBI4P0CG63 381 aaKnown RBP1.88□□□□□ -2.11
SRL1YOR247W PHO85P17157 305 aa1.88□□□□□ -2.11
SRL1YOR247W PEX34P25584 144 aa1.88□□□□□ -2.11
SRL1YOR247W RRT1P38192 103 aa1.88□□□□□ -2.11
SRL1YOR247W YBR219CP38317 127 aa1.88□□□□□ -2.11
SRL1YOR247W VMA22P38784 181 aa1.88□□□□□ -2.11
SRL1YOR247W RIO2P40160 425 aaKnown RBP1.88□□□□□ -2.11
SRL1YOR247W YNL200CP40165 246 aaKnown RBP1.88□□□□□ -2.11
SRL1YOR247W IGO1P53897 168 aa1.88□□□□□ -2.11
SRL1YOR247W PRP11Q07350 266 aaPredicted RBP1.88□□□□□ -2.11
SRL1YOR247W GSP2P32836 220 aaKnown RBP1.87□□□□□ -2.11
SRL1YOR247W CSH1P38287 376 aa1.87□□□□□ -2.11
SRL1YOR247W YBR220CP38318 560 aa1.87□□□□□ -2.11
SRL1YOR247W YER135CP40082 130 aa1.87□□□□□ -2.11
SRL1YOR247W DLS1P40366 167 aa1.87□□□□□ -2.11
SRL1YOR247W APQ12P40532 138 aa1.87□□□□□ -2.11
SRL1YOR247W NQM1P53228 333 aaPredicted RBP1.87□□□□□ -2.11
SRL1YOR247W DAD4P69851 72 aa1.87□□□□□ -2.11
SRL1YOR247W YOR015WQ12169 119 aa1.87□□□□□ -2.11
SRL1YOR247W TRM3Q07527 1436 aa1.86□□□□□ -2.11
SRL1YOR247W FYV4P38783 130 aaPredicted RBP1.86□□□□□ -2.11
SRL1YOR247W HHT1P61830 136 aa1.86□□□□□ -2.11
SRL1YOR247W PIR1Q03178 341 aa1.86□□□□□ -2.11
SRL1YOR247W YLR046CQ12253 270 aa1.86□□□□□ -2.11
SRL1YOR247W MDM35O60200 86 aa1.85□□□□□ -2.11
SRL1YOR247W PET54P10834 293 aa1.85□□□□□ -2.11
SRL1YOR247W CPR5P35176 225 aa1.85□□□□□ -2.11
SRL1YOR247W SLM6P38343 150 aa1.85□□□□□ -2.11
SRL1YOR247W MOG1P47123 218 aa1.85□□□□□ -2.11
SRL1YOR247W PKR1Q03880 122 aaKnown RBP1.85□□□□□ -2.11
SRL1YOR247W YDR391CQ04170 232 aa1.85□□□□□ -2.11
SRL1YOR247W RNH202Q05635 350 aa1.85□□□□□ -2.11
SRL1YOR247W YPR202WQ08993 238 aa1.85□□□□□ -2.11
SRL1YOR247W ATP5P09457 212 aa1.84□□□□□ -2.11
SRL1YOR247W RPL2AP0CX45 254 aaKnown RBP1.84□□□□□ -2.11
SRL1YOR247W RPL2BP0CX46 254 aaKnown RBP1.84□□□□□ -2.11
SRL1YOR247W RPL30P14120 105 aaKnown RBP1.84□□□□□ -2.11
SRL1YOR247W YRA2P36036 203 aaKnown RBP RIP-Chip data1.84□□□□□ -2.11not detected
SRL1YOR247W YAP3P38749 330 aa1.84□□□□□ -2.11
SRL1YOR247W LSM1P47017 172 aaKnown RBP1.84□□□□□ -2.11
SRL1YOR247W RAV2Q03956 351 aa1.84□□□□□ -2.11
SRL1YOR247W YLR162WQ06235 118 aa1.84□□□□□ -2.11
SRL1YOR247W SYM1Q06563 197 aa1.84□□□□□ -2.11
SRL1YOR247W YPD1Q07688 167 aa1.84□□□□□ -2.11
SRL1YOR247W CSI2Q08054 341 aa1.84□□□□□ -2.11
SRL1YOR247W COX8P04039 78 aa1.83□□□□□ -2.12
SRL1YOR247W YOL162WP0CF19 215 aa1.83□□□□□ -2.12
SRL1YOR247W GPA2P10823 449 aa1.83□□□□□ -2.12
SRL1YOR247W PTC1P35182 281 aa1.83□□□□□ -2.12
SRL1YOR247W YKR045CP36138 183 aa1.83□□□□□ -2.12
SRL1YOR247W YHL018WP38744 120 aaPredicted RBP1.83□□□□□ -2.12
SRL1YOR247W YEL073CP39974 107 aa1.83□□□□□ -2.12
SRL1YOR247W YEL028WP39989 153 aa1.83□□□□□ -2.12
SRL1YOR247W RPL13BP40212 199 aaKnown RBP1.83□□□□□ -2.12
SRL1YOR247W THG1P53215 237 aaKnown RBP1.83□□□□□ -2.12
SRL1YOR247W ORM1P53224 222 aa1.83□□□□□ -2.12
SRL1YOR247W DML1Q03652 475 aa1.83□□□□□ -2.12
SRL1YOR247W RRP17Q04031 235 aaPredicted RBP1.83□□□□□ -2.12
SRL1YOR247W HRD1Q08109 551 aa1.83□□□□□ -2.12
SRL1YOR247W RPL13AQ12690 199 aaPredicted RBP1.83□□□□□ -2.12
SRL1YOR247W QCR8P08525 94 aa1.82□□□□□ -2.12
SRL1YOR247W ALB1P47019 175 aaPredicted RBP1.82□□□□□ -2.12
SRL1YOR247W RCE1Q03530 315 aa1.82□□□□□ -2.12
SRL1YOR247W UPS3Q04006 179 aa1.82□□□□□ -2.12
SRL1YOR247W YOR381W-AQ3E804 55 aa1.82□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 24.3 ms