RNA–Protein interactions for RNA: YNL088W

TOP2, Transcript of Topoisomerase II, yeastyeast

Gene TOP2, Length 4,287 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TOP2YNL088W TY1B-JR2P47100 1755 aaKnown RBP2.1□□□□□ -2.07
TOP2YNL088W TY1B-ER2Q03619 1755 aa2.1□□□□□ -2.07
TOP2YNL088W TY1B-MR1Q04214 1755 aa2.1□□□□□ -2.07
TOP2YNL088W TY1B-MR2Q04670 1755 aaKnown RBP2.1□□□□□ -2.07
TOP2YNL088W TY1B-LR1Q12088 1755 aaKnown RBP2.1□□□□□ -2.07
TOP2YNL088W TY1B-NL1Q12112 1755 aa2.1□□□□□ -2.07
TOP2YNL088W TY1B-GR1Q12141 1755 aa2.1□□□□□ -2.07
TOP2YNL088W TY1B-BLQ12490 1755 aa2.1□□□□□ -2.07
TOP2YNL088W SRB8P25648 1427 aa2.09□□□□□ -2.07
TOP2YNL088W RPL15AP05748 204 aaKnown RBP2.09□□□□□ -2.07
TOP2YNL088W RPL14AP36105 138 aaKnown RBP2.09□□□□□ -2.07
TOP2YNL088W YGR050CP53231 118 aa2.09□□□□□ -2.07
TOP2YNL088W CUZ1P53899 274 aa2.09□□□□□ -2.07
TOP2YNL088W RPL15BP54780 204 aaPredicted RBP2.09□□□□□ -2.07
TOP2YNL088W YDR461C-AQ2V2P7 80 aa2.09□□□□□ -2.07
TOP2YNL088W TOM40P23644 387 aaKnown RBP2.09□□□□□ -2.07
TOP2YNL088W ERG4P25340 473 aa2.09□□□□□ -2.07
TOP2YNL088W RPL16AP26784 199 aaKnown RBP2.09□□□□□ -2.07
TOP2YNL088W LDS1P31379 325 aa2.09□□□□□ -2.07
TOP2YNL088W YBR013CP38215 129 aa2.09□□□□□ -2.07
TOP2YNL088W TEM1P38987 245 aa2.09□□□□□ -2.07
TOP2YNL088W YER181CP40097 107 aa2.09□□□□□ -2.07
TOP2YNL088W YJL213WP40896 331 aa2.09□□□□□ -2.07
TOP2YNL088W PFS2P42841 465 aaKnown RBP2.09□□□□□ -2.07
TOP2YNL088W BAT2P47176 376 aaKnown RBP2.09□□□□□ -2.07
TOP2YNL088W YGL088WP53151 121 aa2.09□□□□□ -2.07
TOP2YNL088W YMR103CQ04436 120 aa2.09□□□□□ -2.07
TOP2YNL088W PST1Q12355 444 aa2.09□□□□□ -2.07
TOP2YNL088W SIN3P22579 1536 aa2.09□□□□□ -2.07
TOP2YNL088W YHR139C-AO13536 103 aa2.09□□□□□ -2.08
TOP2YNL088W COX5BP00425 151 aa2.09□□□□□ -2.08
TOP2YNL088W ATP5P09457 212 aa2.09□□□□□ -2.08
TOP2YNL088W YIL059CP40520 121 aa2.09□□□□□ -2.08
TOP2YNL088W GAT4P40569 121 aa2.09□□□□□ -2.08
TOP2YNL088W CDC1P40986 491 aa2.09□□□□□ -2.08
TOP2YNL088W YDR415CQ04033 374 aaPredicted RBP2.09□□□□□ -2.08
TOP2YNL088W YHC1Q05900 231 aaKnown RBP2.09□□□□□ -2.08
TOP2YNL088W FAS2P19097 1887 aaKnown RBP2.09□□□□□ -2.08
TOP2YNL088W GEA1P47102 1408 aaPredicted RBP2.09□□□□□ -2.08
TOP2YNL088W RAD6P06104 172 aa2.08□□□□□ -2.08
TOP2YNL088W YFR010W-AP0C5N0 62 aa2.08□□□□□ -2.08
TOP2YNL088W FMT1P32785 401 aa2.08□□□□□ -2.08
TOP2YNL088W PEX2P32800 271 aa2.08□□□□□ -2.08
TOP2YNL088W UTP30P36144 274 aaKnown RBP2.08□□□□□ -2.08
TOP2YNL088W SFT2P38166 215 aa2.08□□□□□ -2.08
TOP2YNL088W CAT5P41735 233 aa2.08□□□□□ -2.08
TOP2YNL088W TIM18Q08749 192 aa2.08□□□□□ -2.08
TOP2YNL088W FEX2Q08991 375 aa2.08□□□□□ -2.08
TOP2YNL088W YDL211CQ12121 372 aa2.08□□□□□ -2.08
TOP2YNL088W SWR1Q05471 1514 aa2.08□□□□□ -2.08
TOP2YNL088W YJL218WP40892 196 aaKnown RBP2.08□□□□□ -2.08
TOP2YNL088W YFR045WP43617 309 aa2.08□□□□□ -2.08
TOP2YNL088W GEP7P53171 287 aa2.08□□□□□ -2.08
TOP2YNL088W RSM10Q03201 203 aa2.08□□□□□ -2.08
TOP2YNL088W RCE1Q03530 315 aa2.08□□□□□ -2.08
TOP2YNL088W YOR292CQ08743 309 aa2.08□□□□□ -2.08
TOP2YNL088W LAS17Q12446 633 aa2.08□□□□□ -2.08
TOP2YNL088W CLB6P32943 380 aa2.08□□□□□ -2.08
TOP2YNL088W DAN1P47178 298 aa2.08□□□□□ -2.08
TOP2YNL088W ROT1Q03691 256 aa2.08□□□□□ -2.08
TOP2YNL088W YCR024C-BQ3E7Z8 88 aa2.08□□□□□ -2.08
TOP2YNL088W AUS1Q08409 1394 aa2.08□□□□□ -2.08
TOP2YNL088W RPS14AP06367 137 aaKnown RBP2.08□□□□□ -2.08
TOP2YNL088W CPA1P07258 411 aaKnown RBP2.08□□□□□ -2.08
TOP2YNL088W AHT1P29589 182 aa2.08□□□□□ -2.08
TOP2YNL088W AGA1P32323 725 aa2.08□□□□□ -2.08
TOP2YNL088W RPS14BP39516 138 aaKnown RBP2.08□□□□□ -2.08
TOP2YNL088W NRD1P53617 575 aaKnown RBP RIP-Chip data2.08□□□□□ -2.08not detected
TOP2YNL088W YNL234WP53857 426 aa2.08□□□□□ -2.08
TOP2YNL088W FIT1Q04433 528 aa2.08□□□□□ -2.08
TOP2YNL088W GPI11Q06636 219 aa2.08□□□□□ -2.08
TOP2YNL088W YPL162CQ12042 273 aa2.08□□□□□ -2.08
TOP2YNL088W TDA8Q6B2U8 126 aa2.08□□□□□ -2.08
TOP2YNL088W YRF1-2P40105 1681 aa2.07□□□□□ -2.08
TOP2YNL088W DNA2P38859 1522 aa2.07□□□□□ -2.08
TOP2YNL088W RPL23AP0CX41 137 aaKnown RBP2.07□□□□□ -2.08
TOP2YNL088W RPL23BP0CX42 137 aaKnown RBP2.07□□□□□ -2.08
TOP2YNL088W MRS4P23500 304 aa2.07□□□□□ -2.08
TOP2YNL088W LDB16P25587 256 aa2.07□□□□□ -2.08
TOP2YNL088W YER188WP40103 239 aa2.07□□□□□ -2.08
TOP2YNL088W AVT7P40501 490 aa2.07□□□□□ -2.08
TOP2YNL088W YFL015CP43578 164 aa2.07□□□□□ -2.08
TOP2YNL088W EMC4P53073 190 aa2.07□□□□□ -2.08
TOP2YNL088W FMP41P53889 259 aaKnown RBP2.07□□□□□ -2.08
TOP2YNL088W PCL9Q12477 304 aa2.07□□□□□ -2.08
TOP2YNL088W GPX1P36014 167 aa2.07□□□□□ -2.08
TOP2YNL088W SHE1P38200 338 aa2.07□□□□□ -2.08
TOP2YNL088W YAR029WP39549 74 aa2.07□□□□□ -2.08
TOP2YNL088W PHS1P40857 217 aa2.07□□□□□ -2.08
TOP2YNL088W CUP9P41817 306 aa2.07□□□□□ -2.08
TOP2YNL088W YPL264CQ08980 353 aa2.07□□□□□ -2.08
TOP2YNL088W YBL008W-AQ3E821 79 aa2.07□□□□□ -2.08
TOP2YNL088W IQG1Q12280 1495 aa2.07□□□□□ -2.08
TOP2YNL088W PAM16P42949 149 aa2.07□□□□□ -2.08
TOP2YNL088W YMR082CQ04276 118 aa2.07□□□□□ -2.08
TOP2YNL088W YBR298C-AQ8TGK4 73 aa2.07□□□□□ -2.08
TOP2YNL088W YFR032C-BQ8TGU2 87 aa2.07□□□□□ -2.08
TOP2YNL088W RPS8AP0CX39 200 aaKnown RBP2.06□□□□□ -2.08
TOP2YNL088W RPS8BP0CX40 200 aaKnown RBP2.06□□□□□ -2.08
TOP2YNL088W CDC43P18898 376 aa2.06□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 19.9 ms