RNA–Protein interactions for RNA: YMR171C

EAR1, Transcript of Specificity factor required for Rsp5p-dependent ubiquitination, yeastyeast

Gene EAR1, Length 1,653 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
EAR1YMR171C PDR17P53844 350 aa3.87□□□□□ -1.79
EAR1YMR171C APS2Q00381 147 aa3.87□□□□□ -1.79
EAR1YMR171C CYT2Q00873 224 aa3.87□□□□□ -1.79
EAR1YMR171C SEN15Q04675 128 aa3.87□□□□□ -1.79
EAR1YMR171C YLR281CQ05863 155 aa3.87□□□□□ -1.79
EAR1YMR171C PRR2Q12310 699 aa3.87□□□□□ -1.79
EAR1YMR171C YPR108W-AQ3E7B3 70 aa3.87□□□□□ -1.79
EAR1YMR171C SEC16P48415 2195 aaKnown RBP3.86□□□□□ -1.79
EAR1YMR171C TEL1P38110 2787 aa3.86□□□□□ -1.79
EAR1YMR171C RPL25P04456 142 aaKnown RBP3.86□□□□□ -1.79
EAR1YMR171C CBP6P07253 162 aaPredicted RBP3.86□□□□□ -1.79
EAR1YMR171C RIP1P08067 215 aa3.86□□□□□ -1.79
EAR1YMR171C NHP6AP11632 93 aaKnown RBP3.86□□□□□ -1.79
EAR1YMR171C YKL075CP36083 450 aa3.86□□□□□ -1.79
EAR1YMR171C MRPL11P36521 249 aaPredicted RBP3.86□□□□□ -1.79
EAR1YMR171C REE1P40893 198 aa3.86□□□□□ -1.79
EAR1YMR171C CUP9P41817 306 aa3.86□□□□□ -1.79
EAR1YMR171C AIM24P47127 394 aa3.86□□□□□ -1.79
EAR1YMR171C RIB4P50861 169 aaPredicted RBP3.86□□□□□ -1.79
EAR1YMR171C HHT1P61830 136 aa3.86□□□□□ -1.79
EAR1YMR171C YDR387CQ04162 555 aa3.86□□□□□ -1.79
EAR1YMR171C PRP11Q07350 266 aaPredicted RBP3.86□□□□□ -1.79
EAR1YMR171C RFU1Q08003 200 aa3.86□□□□□ -1.79
EAR1YMR171C YOP1Q12402 180 aa3.86□□□□□ -1.79
EAR1YMR171C RAX2Q12465 1220 aa3.86□□□□□ -1.79
EAR1YMR171C COX5BP00425 151 aa3.85□□□□□ -1.79
EAR1YMR171C FUN14P18411 198 aa3.85□□□□□ -1.79
EAR1YMR171C SEC62P21825 274 aa3.85□□□□□ -1.79
EAR1YMR171C QCR9P22289 66 aa3.85□□□□□ -1.79
EAR1YMR171C PCL1P24867 279 aa3.85□□□□□ -1.79
EAR1YMR171C DEG1P31115 442 aaKnown RBP3.85□□□□□ -1.79
EAR1YMR171C RPB7P34087 171 aa3.85□□□□□ -1.79
EAR1YMR171C YUH1P35127 236 aa3.85□□□□□ -1.79
EAR1YMR171C SHB17P36136 271 aaKnown RBP3.85□□□□□ -1.79
EAR1YMR171C NSA2P40078 261 aaKnown RBP3.85□□□□□ -1.79
EAR1YMR171C CCS1P40202 249 aaKnown RBP3.85□□□□□ -1.79
EAR1YMR171C TTI2P47168 421 aa3.85□□□□□ -1.79
EAR1YMR171C HCH1P53834 153 aa3.85□□□□□ -1.79
EAR1YMR171C FRQ1Q06389 190 aa3.85□□□□□ -1.79
EAR1YMR171C YPL264CQ08980 353 aa3.85□□□□□ -1.79
EAR1YMR171C FYV7Q12247 151 aa3.85□□□□□ -1.79
EAR1YMR171C HUG1Q6Q5K6 68 aa3.85□□□□□ -1.79
EAR1YMR171C BEM2P39960 2167 aaKnown RBP3.85□□□□□ -1.79
EAR1YMR171C URA5P13298 226 aaKnown RBP3.84□□□□□ -1.79
EAR1YMR171C BGL2P15703 313 aaKnown RBP3.84□□□□□ -1.79
EAR1YMR171C CDC50P25656 391 aa3.84□□□□□ -1.79
EAR1YMR171C AHT1P29589 182 aa3.84□□□□□ -1.79
EAR1YMR171C RTC3P38804 111 aaPredicted RBP3.84□□□□□ -1.79
EAR1YMR171C PRM5P40476 318 aa3.84□□□□□ -1.79
EAR1YMR171C YIL029CP40538 142 aa3.84□□□□□ -1.79
EAR1YMR171C PGU1P47180 361 aa3.84□□□□□ -1.79
EAR1YMR171C YGR149WP48236 432 aa3.84□□□□□ -1.79
EAR1YMR171C CGI121Q03705 181 aaKnown RBP3.84□□□□□ -1.79
EAR1YMR171C GRE1Q08969 168 aa3.84□□□□□ -1.79
EAR1YMR171C FRE8Q12209 686 aa3.84□□□□□ -1.79
EAR1YMR171C ATG5Q12380 294 aa3.84□□□□□ -1.79
EAR1YMR171C YNR034W-AQ3E841 98 aa3.84□□□□□ -1.79
EAR1YMR171C YIL134C-AQ45U18 67 aa3.84□□□□□ -1.79
EAR1YMR171C ATG40Q99325 256 aa3.84□□□□□ -1.79
EAR1YMR171C YCR025CP25352 136 aa3.84□□□□□ -1.8
EAR1YMR171C YCR007CP25354 239 aa3.84□□□□□ -1.8
EAR1YMR171C PCP1P53259 346 aa3.84□□□□□ -1.8
EAR1YMR171C DAD3P69850 94 aa3.84□□□□□ -1.8
EAR1YMR171C SDC1Q03323 175 aa3.84□□□□□ -1.8
EAR1YMR171C YFH1Q07540 174 aa3.84□□□□□ -1.8
EAR1YMR171C RPS22AP0C0W1 130 aaKnown RBP3.83□□□□□ -1.8
EAR1YMR171C RPS16AP0CX51 143 aaKnown RBP3.83□□□□□ -1.8
EAR1YMR171C RPS16BP0CX52 143 aaKnown RBP3.83□□□□□ -1.8
EAR1YMR171C ATG15P25641 520 aa3.83□□□□□ -1.8
EAR1YMR171C MCH2P36032 473 aa3.83□□□□□ -1.8
EAR1YMR171C NTC20P38302 140 aaPredicted RBP3.83□□□□□ -1.8
EAR1YMR171C OST3P48439 350 aa3.83□□□□□ -1.8
EAR1YMR171C GEP7P53171 287 aa3.83□□□□□ -1.8
EAR1YMR171C NUP53Q03790 475 aa3.83□□□□□ -1.8
EAR1YMR171C MIX14Q04341 121 aa3.83□□□□□ -1.8
EAR1YMR171C MHR1Q06630 226 aa3.83□□□□□ -1.8
EAR1YMR171C YOR292CQ08743 309 aa3.83□□□□□ -1.8
EAR1YMR171C YOR032W-AQ8TGS1 66 aa3.83□□□□□ -1.8
EAR1YMR171C FMP49A0A023PZB3 126 aa3.82□□□□□ -1.8
EAR1YMR171C ATP5P09457 212 aa3.82□□□□□ -1.8
EAR1YMR171C SAG1P20840 650 aa3.82□□□□□ -1.8
EAR1YMR171C YGL010WP25338 174 aa3.82□□□□□ -1.8
EAR1YMR171C SWD3P38123 315 aa3.82□□□□□ -1.8
EAR1YMR171C RPB11P38902 120 aa3.82□□□□□ -1.8
EAR1YMR171C YER079WP40052 210 aaKnown RBP3.82□□□□□ -1.8
EAR1YMR171C COX15P40086 486 aa3.82□□□□□ -1.8
EAR1YMR171C PCL7P40186 285 aa3.82□□□□□ -1.8
EAR1YMR171C YPS6P40583 537 aa3.82□□□□□ -1.8
EAR1YMR171C ATC1Q04005 294 aa3.82□□□□□ -1.8
EAR1YMR171C UPS1Q05776 175 aa3.82□□□□□ -1.8
EAR1YMR171C PIN3Q06449 215 aa3.82□□□□□ -1.8
EAR1YMR171C HRD1Q08109 551 aa3.82□□□□□ -1.8
EAR1YMR171C YOR376WQ08900 122 aa3.82□□□□□ -1.8
EAR1YMR171C ERV2Q12284 196 aa3.82□□□□□ -1.8
EAR1YMR171C ACC1Q00955 2233 aaKnown RBP3.82□□□□□ -1.8
EAR1YMR171C FCY2P17064 533 aa3.81□□□□□ -1.8
EAR1YMR171C ATP10P18496 279 aa3.81□□□□□ -1.8
EAR1YMR171C TCA17P32613 152 aa3.81□□□□□ -1.8
EAR1YMR171C QDR3P38227 689 aa3.81□□□□□ -1.8
EAR1YMR171C CUE1P38428 203 aa3.81□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 22.4 ms