RNA–Protein interactions for RNA: YMR128W

ECM16, Transcript of Essential DEAH-box ATP-dependent RNA helicase specific to U3 snoRNP, yeastyeast

Gene ECM16, Length 3,804 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ECM16YMR128W RPL13BP40212 199 aaKnown RBP3.22□□□□□ -1.89
ECM16YMR128W CFD1P40558 293 aa3.22□□□□□ -1.89
ECM16YMR128W PDR17P53844 350 aa3.22□□□□□ -1.89
ECM16YMR128W DAD3P69850 94 aa3.22□□□□□ -1.89
ECM16YMR128W MRP51Q02950 344 aa3.22□□□□□ -1.89
ECM16YMR128W YOR186WQ08560 144 aa3.22□□□□□ -1.89
ECM16YMR128W YPL264CQ08980 353 aa3.22□□□□□ -1.89
ECM16YMR128W GEP5Q12393 293 aa3.22□□□□□ -1.89
ECM16YMR128W RPL13AQ12690 199 aaPredicted RBP3.22□□□□□ -1.89
ECM16YMR128W YDL085C-AQ3E7B7 68 aaKnown RBP3.22□□□□□ -1.89
ECM16YMR128W YCR024C-BQ3E7Z8 88 aa3.22□□□□□ -1.89
ECM16YMR128W FMP49A0A023PZB3 126 aa3.22□□□□□ -1.89
ECM16YMR128W ATP5P09457 212 aa3.22□□□□□ -1.89
ECM16YMR128W RPL30P14120 105 aaKnown RBP3.22□□□□□ -1.89
ECM16YMR128W DEG1P31115 442 aaKnown RBP3.22□□□□□ -1.89
ECM16YMR128W SRP14P38985 146 aa3.22□□□□□ -1.89
ECM16YMR128W YIL169CP40442 995 aa3.22□□□□□ -1.89
ECM16YMR128W LCL3P53153 274 aa3.22□□□□□ -1.89
ECM16YMR128W RPL21AQ02753 160 aaKnown RBP3.22□□□□□ -1.89
ECM16YMR128W API2Q04413 109 aa3.22□□□□□ -1.89
ECM16YMR128W SWT1Q12104 458 aa3.22□□□□□ -1.89
ECM16YMR128W RPL21BQ12672 160 aaKnown RBP3.22□□□□□ -1.89
ECM16YMR128W PHD1P36093 366 aa3.21□□□□□ -1.9
ECM16YMR128W HUA1P40325 198 aa3.21□□□□□ -1.9
ECM16YMR128W YIL086CP40503 102 aa3.21□□□□□ -1.9
ECM16YMR128W ERG25P53045 309 aa3.21□□□□□ -1.9
ECM16YMR128W SWS2P53937 143 aa3.21□□□□□ -1.9
ECM16YMR128W SCS22Q6Q595 175 aa3.21□□□□□ -1.9
ECM16YMR128W URA5P13298 226 aaKnown RBP3.21□□□□□ -1.9
ECM16YMR128W FCY2P17064 533 aa3.21□□□□□ -1.9
ECM16YMR128W YUH1P35127 236 aa3.21□□□□□ -1.9
ECM16YMR128W UIP3P39547 235 aa3.21□□□□□ -1.9
ECM16YMR128W MSY1P48527 492 aa3.21□□□□□ -1.9
ECM16YMR128W YGR050CP53231 118 aa3.21□□□□□ -1.9
ECM16YMR128W SAE3P89114 91 aa3.21□□□□□ -1.9
ECM16YMR128W YDC1Q02896 317 aa3.21□□□□□ -1.9
ECM16YMR128W FIT3Q08907 204 aa3.21□□□□□ -1.9
ECM16YMR128W SOF1P33750 489 aaKnown RBP3.21□□□□□ -1.9
ECM16YMR128W YBL059WP34224 193 aa3.21□□□□□ -1.9
ECM16YMR128W CUE1P38428 203 aa3.21□□□□□ -1.9
ECM16YMR128W IRC22P40006 225 aa3.21□□□□□ -1.9
ECM16YMR128W SHO1P40073 367 aa3.21□□□□□ -1.9
ECM16YMR128W YPS6P40583 537 aa3.21□□□□□ -1.9
ECM16YMR128W GLC8P41818 229 aa3.21□□□□□ -1.9
ECM16YMR128W YGR151CP53287 111 aa3.21□□□□□ -1.9
ECM16YMR128W SUN4P53616 420 aa3.21□□□□□ -1.9
ECM16YMR128W HHT1P61830 136 aa3.21□□□□□ -1.9
ECM16YMR128W RUB1Q03919 77 aa3.21□□□□□ -1.9
ECM16YMR128W MSL5Q12186 476 aaKnown RBP RIP-Chip data3.21□□□□□ -1.9not detected
ECM16YMR128W MPD1Q12404 318 aaKnown RBP3.21□□□□□ -1.9
ECM16YMR128W MAK32P23060 363 aa3.2□□□□□ -1.9
ECM16YMR128W XPT1P47165 209 aa3.2□□□□□ -1.9
ECM16YMR128W TTI2P47168 421 aa3.2□□□□□ -1.9
ECM16YMR128W DSK2P48510 373 aa3.2□□□□□ -1.9
ECM16YMR128W YDL157CQ12082 118 aa3.2□□□□□ -1.9
ECM16YMR128W TPT1Q12272 230 aaKnown RBP3.2□□□□□ -1.9
ECM16YMR128W PDX1P16451 410 aa3.2□□□□□ -1.9
ECM16YMR128W YER079WP40052 210 aaKnown RBP3.2□□□□□ -1.9
ECM16YMR128W GEP7P53171 287 aa3.2□□□□□ -1.9
ECM16YMR128W DPB4Q04603 196 aaKnown RBP3.2□□□□□ -1.9
ECM16YMR128W YFH1Q07540 174 aa3.2□□□□□ -1.9
ECM16YMR128W HFA1P32874 2273 aa3.2□□□□□ -1.9
ECM16YMR128W COX2P00410 251 aa3.2□□□□□ -1.9
ECM16YMR128W RPS16AP0CX51 143 aaKnown RBP3.2□□□□□ -1.9
ECM16YMR128W RPS16BP0CX52 143 aaKnown RBP3.2□□□□□ -1.9
ECM16YMR128W MRS3P10566 314 aa3.2□□□□□ -1.9
ECM16YMR128W HMX1P32339 317 aa3.2□□□□□ -1.9
ECM16YMR128W SRX1P36077 127 aa3.2□□□□□ -1.9
ECM16YMR128W RIB4P50861 169 aaPredicted RBP3.2□□□□□ -1.9
ECM16YMR128W RPN14P53196 417 aa3.2□□□□□ -1.9
ECM16YMR128W TRS23Q03784 219 aa3.2□□□□□ -1.9
ECM16YMR128W UPS3Q04006 179 aa3.2□□□□□ -1.9
ECM16YMR128W ECM18Q04623 453 aa3.2□□□□□ -1.9
ECM16YMR128W YDL180WQ12301 547 aa3.2□□□□□ -1.9
ECM16YMR128W FMP27Q06179 2628 aa3.2□□□□□ -1.9
ECM16YMR128W YDR157WA0A023PZE8 133 aa3.19□□□□□ -1.9
ECM16YMR128W RPL31AP0C2H8 113 aaKnown RBP3.19□□□□□ -1.9
ECM16YMR128W RPL31BP0C2H9 113 aaKnown RBP3.19□□□□□ -1.9
ECM16YMR128W MSI1P13712 422 aa3.19□□□□□ -1.9
ECM16YMR128W TCA17P32613 152 aa3.19□□□□□ -1.9
ECM16YMR128W MCH2P36032 473 aa3.19□□□□□ -1.9
ECM16YMR128W CSM4Q08955 156 aa3.19□□□□□ -1.9
ECM16YMR128W YMR316C-AI2HB70 103 aa3.19□□□□□ -1.9
ECM16YMR128W CUP2P15315 225 aa3.19□□□□□ -1.9
ECM16YMR128W RNA15P25299 296 aaPredicted RBP3.19□□□□□ -1.9
ECM16YMR128W SPS18P32572 300 aa3.19□□□□□ -1.9
ECM16YMR128W DER1P38307 211 aa3.19□□□□□ -1.9
ECM16YMR128W DFG10P40526 253 aa3.19□□□□□ -1.9
ECM16YMR128W CPD1P53314 239 aa3.19□□□□□ -1.9
ECM16YMR128W YNR048WP53740 393 aa3.19□□□□□ -1.9
ECM16YMR128W WSC2P53832 503 aa3.19□□□□□ -1.9
ECM16YMR128W ATG21Q02887 496 aa3.19□□□□□ -1.9
ECM16YMR128W GIM5Q04493 163 aa3.19□□□□□ -1.9
ECM16YMR128W BAT1P38891 393 aaKnown RBP3.19□□□□□ -1.9
ECM16YMR128W RIM9Q04734 239 aa3.19□□□□□ -1.9
ECM16YMR128W ADH2P00331 348 aaKnown RBP3.18□□□□□ -1.9
ECM16YMR128W SAG1P20840 650 aa3.18□□□□□ -1.9
ECM16YMR128W ERG8P24521 451 aa3.18□□□□□ -1.9
ECM16YMR128W YKL187CP34231 750 aa3.18□□□□□ -1.9
ECM16YMR128W SGN1P40561 250 aaKnown RBP RIP-Chip data3.18□□□□□ -1.9not detected
Retrieved 100 of 5,963 RNA–protein pairs in 40.8 ms