RNA–Protein interactions for RNA: YLR417W

VPS36, Transcript of Component of the ESCRT-II complex, yeastyeast

Gene VPS36, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS36YLR417W JAC1P53193 184 aa3.47□□□□□ -1.85
VPS36YLR417W RSM10Q03201 203 aa3.47□□□□□ -1.85
VPS36YLR417W ARR2Q06597 130 aa3.47□□□□□ -1.85
VPS36YLR417W YOR268CQ08734 132 aa3.47□□□□□ -1.85
VPS36YLR417W PHO88P38264 188 aaPredicted RBP3.47□□□□□ -1.85
VPS36YLR417W SYF2P53277 215 aaPredicted RBP3.47□□□□□ -1.85
VPS36YLR417W ERV29P53337 310 aa3.47□□□□□ -1.85
VPS36YLR417W PDR17P53844 350 aa3.47□□□□□ -1.85
VPS36YLR417W YCL001W-AP87012 153 aa3.47□□□□□ -1.85
VPS36YLR417W ABF2Q02486 183 aa3.47□□□□□ -1.85
VPS36YLR417W YML096WQ04489 525 aa3.47□□□□□ -1.85
VPS36YLR417W YOR283WQ12040 230 aaKnown RBP3.47□□□□□ -1.85
VPS36YLR417W YLR046CQ12253 270 aa3.47□□□□□ -1.85
VPS36YLR417W PSF1Q12488 208 aa3.47□□□□□ -1.85
VPS36YLR417W YCL012CQ8J0M4 134 aa3.47□□□□□ -1.85
VPS36YLR417W YHR139C-AO13536 103 aa3.46□□□□□ -1.86
VPS36YLR417W RSA4P25382 515 aaKnown RBP3.46□□□□□ -1.86
VPS36YLR417W AHC2P25649 128 aa3.46□□□□□ -1.86
VPS36YLR417W ACP1P32463 125 aa3.46□□□□□ -1.86
VPS36YLR417W GLR1P41921 483 aaKnown RBP3.46□□□□□ -1.86
VPS36YLR417W GON7P46984 123 aa3.46□□□□□ -1.86
VPS36YLR417W YJR141WP47172 347 aaPredicted RBP3.46□□□□□ -1.86
VPS36YLR417W MPC1P53157 130 aaKnown RBP3.46□□□□□ -1.86
VPS36YLR417W YDR248CQ03786 193 aa3.46□□□□□ -1.86
VPS36YLR417W YPD1Q07688 167 aa3.46□□□□□ -1.86
VPS36YLR417W YOR020W-AQ3E824 90 aa3.46□□□□□ -1.86
VPS36YLR417W TIM9O74700 87 aa3.45□□□□□ -1.86
VPS36YLR417W QCR7P00128 127 aa3.45□□□□□ -1.86
VPS36YLR417W RAS2P01120 322 aaKnown RBP3.45□□□□□ -1.86
VPS36YLR417W SNF6P18888 332 aa3.45□□□□□ -1.86
VPS36YLR417W YCR099CP25657 155 aa3.45□□□□□ -1.86
VPS36YLR417W OAC1P32332 324 aa3.45□□□□□ -1.86
VPS36YLR417W RPF1P38805 295 aaKnown RBP3.45□□□□□ -1.86
VPS36YLR417W HPA3P39979 161 aa3.45□□□□□ -1.86
VPS36YLR417W POG1P40473 351 aa3.45□□□□□ -1.86
VPS36YLR417W ERG10P41338 398 aaKnown RBP3.45□□□□□ -1.86
VPS36YLR417W YGR201CP42936 225 aa3.45□□□□□ -1.86
VPS36YLR417W SAY1P53324 424 aa3.45□□□□□ -1.86
VPS36YLR417W GRX5Q02784 150 aa3.45□□□□□ -1.86
VPS36YLR417W BRX1Q08235 291 aaKnown RBP3.45□□□□□ -1.86
VPS36YLR417W RPL25P04456 142 aaKnown RBP3.44□□□□□ -1.86
VPS36YLR417W SHE2P36068 246 aaKnown RBP RIP-Chip data3.44□□□□□ -1.86not detected
VPS36YLR417W YCR087C-AP37263 153 aa3.44□□□□□ -1.86
VPS36YLR417W YEL028WP39989 153 aa3.44□□□□□ -1.86
VPS36YLR417W LSM4P40070 187 aaKnown RBP3.44□□□□□ -1.86
VPS36YLR417W BMT5P40493 336 aa3.44□□□□□ -1.86
VPS36YLR417W RPA43P46669 326 aa3.44□□□□□ -1.86
VPS36YLR417W AIM25P47140 327 aa3.44□□□□□ -1.86
VPS36YLR417W YGR026WP53217 278 aa3.44□□□□□ -1.86
VPS36YLR417W GRH1Q04410 372 aaKnown RBP3.44□□□□□ -1.86
VPS36YLR417W CDD1Q06549 142 aa3.44□□□□□ -1.86
VPS36YLR417W NIP7Q08962 181 aaKnown RBP3.44□□□□□ -1.86
VPS36YLR417W PCC1Q3E833 88 aa3.44□□□□□ -1.86
VPS36YLR417W CCH1P50077 2039 aa3.44□□□□□ -1.86
VPS36YLR417W NOP1P15646 327 aaKnown RBP3.44□□□□□ -1.86
VPS36YLR417W SRP102P36057 244 aaPredicted RBP3.44□□□□□ -1.86
VPS36YLR417W YER084WP40057 128 aa3.44□□□□□ -1.86
VPS36YLR417W MPM1P40364 252 aa3.44□□□□□ -1.86
VPS36YLR417W PIR5P46999 287 aa3.44□□□□□ -1.86
VPS36YLR417W YJL016WP47072 561 aa3.44□□□□□ -1.86
VPS36YLR417W YGL088WP53151 121 aa3.44□□□□□ -1.86
VPS36YLR417W ERV14P53173 138 aa3.44□□□□□ -1.86
VPS36YLR417W NRK1P53915 240 aa3.44□□□□□ -1.86
VPS36YLR417W ARL3Q02804 198 aa3.44□□□□□ -1.86
VPS36YLR417W LDB18Q07887 179 aa3.44□□□□□ -1.86
VPS36YLR417W DGK1Q12382 290 aa3.44□□□□□ -1.86
VPS36YLR417W PRM7Q12459 698 aa3.44□□□□□ -1.86
VPS36YLR417W YKL018C-AQ3E7A7 99 aa3.44□□□□□ -1.86
VPS36YLR417W SIR2P06700 562 aa3.43□□□□□ -1.86
VPS36YLR417W MRPL44P19956 98 aa3.43□□□□□ -1.86
VPS36YLR417W CKS1P20486 150 aaKnown RBP3.43□□□□□ -1.86
VPS36YLR417W LHP1P33399 275 aaKnown RBP3.43□□□□□ -1.86
VPS36YLR417W PRS3P38689 320 aaKnown RBP3.43□□□□□ -1.86
VPS36YLR417W TIF34P40217 347 aaKnown RBP3.43□□□□□ -1.86
VPS36YLR417W IGO1P53897 168 aa3.43□□□□□ -1.86
VPS36YLR417W ANT1Q06497 328 aa3.43□□□□□ -1.86
VPS36YLR417W SPC3Q12133 184 aa3.43□□□□□ -1.86
VPS36YLR417W YGL194C-AQ2V2P6 80 aa3.43□□□□□ -1.86
VPS36YLR417W YCL001W-BQ96VH2 84 aa3.43□□□□□ -1.86
VPS36YLR417W RIF1P29539 1916 aa3.43□□□□□ -1.86
VPS36YLR417W FKS1P38631 1876 aaKnown RBP3.42□□□□□ -1.86
VPS36YLR417W ADH3P07246 375 aaKnown RBP3.42□□□□□ -1.86
VPS36YLR417W DPM1P14020 267 aaKnown RBP3.42□□□□□ -1.86
VPS36YLR417W KRE1P17260 313 aa3.42□□□□□ -1.86
VPS36YLR417W PEX34P25584 144 aa3.42□□□□□ -1.86
VPS36YLR417W APS1P35181 156 aa3.42□□□□□ -1.86
VPS36YLR417W TMA19P35691 167 aaKnown RBP3.42□□□□□ -1.86
VPS36YLR417W POP7P38291 140 aa3.42□□□□□ -1.86
VPS36YLR417W SHG1P38337 142 aa3.42□□□□□ -1.86
VPS36YLR417W ARC15P40518 154 aaRIP-Chip data3.42□□□□□ -1.86not detected
VPS36YLR417W PRM10P42946 383 aa3.42□□□□□ -1.86
VPS36YLR417W GNA1P43577 159 aaPredicted RBP3.42□□□□□ -1.86
VPS36YLR417W YJR056CP47115 236 aa3.42□□□□□ -1.86
VPS36YLR417W SNN1P48232 102 aa3.42□□□□□ -1.86
VPS36YLR417W YNR062CP53748 327 aa3.42□□□□□ -1.86
VPS36YLR417W RDI1Q12434 202 aa3.42□□□□□ -1.86
VPS36YLR417W MRPL15P36523 253 aa3.41□□□□□ -1.86
VPS36YLR417W DOC1P53068 250 aa3.41□□□□□ -1.86
VPS36YLR417W COA6Q3E846 104 aa3.41□□□□□ -1.86
VPS36YLR417W Q0255P03881 472 aa3.41□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 78 ms