RNA–Protein interactions for RNA: YLR211C

ATG38, Transcript of Homodimeric subunit of autophagy-specific PtdIns-3-kinase complex I, yeastyeast

Gene ATG38, Length 681 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG38YLR211C CIS3P47001 227 aa1.41□□□□□ -2.18
ATG38YLR211C DOC1P53068 250 aa1.41□□□□□ -2.18
ATG38YLR211C RAV2Q03956 351 aa1.41□□□□□ -2.18
ATG38YLR211C GAL83Q04739 417 aa1.41□□□□□ -2.18
ATG38YLR211C YLR412C-AQ3E742 68 aa1.41□□□□□ -2.18
ATG38YLR211C STP22P25604 385 aa1.4□□□□□ -2.19
ATG38YLR211C SNC2P33328 115 aa1.4□□□□□ -2.19
ATG38YLR211C YET1P35723 206 aa1.4□□□□□ -2.19
ATG38YLR211C FYV4P38783 130 aaPredicted RBP1.4□□□□□ -2.19
ATG38YLR211C SPC25P40014 221 aa1.4□□□□□ -2.19
ATG38YLR211C AYR1P40471 297 aa1.4□□□□□ -2.19
ATG38YLR211C AGE2P40529 298 aa1.4□□□□□ -2.19
ATG38YLR211C CUP9P41817 306 aa1.4□□□□□ -2.19
ATG38YLR211C GLR1P41921 483 aaKnown RBP1.4□□□□□ -2.19
ATG38YLR211C FIP1P45976 327 aa1.4□□□□□ -2.19
ATG38YLR211C XPT1P47165 209 aa1.4□□□□□ -2.19
ATG38YLR211C YGL193CP53097 103 aa1.4□□□□□ -2.19
ATG38YLR211C TIM13P53299 105 aa1.4□□□□□ -2.19
ATG38YLR211C YNR062CP53748 327 aa1.4□□□□□ -2.19
ATG38YLR211C MRPS8Q03799 155 aa1.4□□□□□ -2.19
ATG38YLR211C YMR253CQ04835 414 aa1.4□□□□□ -2.19
ATG38YLR211C YMR320WQ04897 101 aa1.4□□□□□ -2.19
ATG38YLR211C YOR214CQ12282 236 aa1.4□□□□□ -2.19
ATG38YLR211C YLR361C-AQ3E795 98 aa1.4□□□□□ -2.19
ATG38YLR211C ATP5P09457 212 aa1.39□□□□□ -2.19
ATG38YLR211C FZF1P32805 299 aa1.39□□□□□ -2.19
ATG38YLR211C PTC1P35182 281 aa1.39□□□□□ -2.19
ATG38YLR211C PAM17P36147 197 aa1.39□□□□□ -2.19
ATG38YLR211C ERV15P38312 142 aa1.39□□□□□ -2.19
ATG38YLR211C YBR220CP38318 560 aa1.39□□□□□ -2.19
ATG38YLR211C YNL200CP40165 246 aaKnown RBP1.39□□□□□ -2.19
ATG38YLR211C DLS1P40366 167 aa1.39□□□□□ -2.19
ATG38YLR211C VPS28Q02767 242 aa1.39□□□□□ -2.19
ATG38YLR211C YMR295CQ03559 197 aa1.39□□□□□ -2.19
ATG38YLR211C RFU1Q08003 200 aa1.39□□□□□ -2.19
ATG38YLR211C FSF1Q12029 327 aaKnown RBP1.39□□□□□ -2.19
ATG38YLR211C ATP20Q12233 115 aa1.39□□□□□ -2.19
ATG38YLR211C RAS2P01120 322 aaKnown RBP1.38□□□□□ -2.19
ATG38YLR211C SPT14P32363 452 aa1.38□□□□□ -2.19
ATG38YLR211C YEL028WP39989 153 aa1.38□□□□□ -2.19
ATG38YLR211C NSA2P40078 261 aaKnown RBP1.38□□□□□ -2.19
ATG38YLR211C YPL073CP40323 161 aa1.38□□□□□ -2.19
ATG38YLR211C TIR3P40552 269 aa1.38□□□□□ -2.19
ATG38YLR211C BOL2P53082 120 aa1.38□□□□□ -2.19
ATG38YLR211C YKR005CQ02203 525 aa1.38□□□□□ -2.19
ATG38YLR211C SHH3Q04487 196 aa1.38□□□□□ -2.19
ATG38YLR211C IRC23Q08416 157 aa1.38□□□□□ -2.19
ATG38YLR211C RAD6P06104 172 aa1.37□□□□□ -2.19
ATG38YLR211C HSP30P25619 332 aa1.37□□□□□ -2.19
ATG38YLR211C PHO88P38264 188 aaPredicted RBP1.37□□□□□ -2.19
ATG38YLR211C HTD2P38790 280 aaKnown RBP1.37□□□□□ -2.19
ATG38YLR211C YNL217WP40152 326 aa1.37□□□□□ -2.19
ATG38YLR211C YJL218WP40892 196 aaKnown RBP1.37□□□□□ -2.19
ATG38YLR211C CCC1P47818 322 aa1.37□□□□□ -2.19
ATG38YLR211C RBL2P48606 106 aaKnown RBP1.37□□□□□ -2.19
ATG38YLR211C YNL033WP53964 284 aa1.37□□□□□ -2.19
ATG38YLR211C PST2Q12335 198 aaKnown RBP1.37□□□□□ -2.19
ATG38YLR211C BOL1Q3E793 110 aa1.37□□□□□ -2.19
ATG38YLR211C ATG40Q99325 256 aa1.37□□□□□ -2.19
ATG38YLR211C YLR236CA0A023PZG4 107 aa1.36□□□□□ -2.19
ATG38YLR211C PEX4P29340 183 aa1.36□□□□□ -2.19
ATG38YLR211C SHE2P36068 246 aaKnown RBP RIP-Chip data1.36□□□□□ -2.19not detected
ATG38YLR211C RRT1P38192 103 aa1.36□□□□□ -2.19
ATG38YLR211C YER135CP40082 130 aa1.36□□□□□ -2.19
ATG38YLR211C RIO2P40160 425 aaKnown RBP1.36□□□□□ -2.19
ATG38YLR211C UBC7Q02159 165 aa1.36□□□□□ -2.19
ATG38YLR211C CSN9Q03981 162 aa1.36□□□□□ -2.19
ATG38YLR211C RIM9Q04734 239 aa1.36□□□□□ -2.19
ATG38YLR211C YDR278CQ05612 105 aa1.36□□□□□ -2.19
ATG38YLR211C TRM3Q07527 1436 aa1.36□□□□□ -2.19
ATG38YLR211C HRD1Q08109 551 aa1.36□□□□□ -2.19
ATG38YLR211C DUR1,2P32528 1835 aaKnown RBP1.36□□□□□ -2.19
ATG38YLR211C TAF2P23255 1407 aa1.35□□□□□ -2.19
ATG38YLR211C SCL1P21243 252 aaKnown RBP1.35□□□□□ -2.19
ATG38YLR211C PRS3P38689 320 aaKnown RBP1.35□□□□□ -2.19
ATG38YLR211C VMA22P38784 181 aa1.35□□□□□ -2.19
ATG38YLR211C YER181CP40097 107 aa1.35□□□□□ -2.19
ATG38YLR211C PHB1P40961 287 aa1.35□□□□□ -2.19
ATG38YLR211C CYT2Q00873 224 aa1.35□□□□□ -2.19
ATG38YLR211C COF1Q03048 143 aaKnown RBP1.35□□□□□ -2.19
ATG38YLR211C YDR391CQ04170 232 aa1.35□□□□□ -2.19
ATG38YLR211C RNH202Q05635 350 aa1.35□□□□□ -2.19
ATG38YLR211C SYM1Q06563 197 aa1.35□□□□□ -2.19
ATG38YLR211C RAD28Q12021 506 aa1.35□□□□□ -2.19
ATG38YLR211C MSB2P32334 1306 aa1.35□□□□□ -2.19
ATG38YLR211C MET5P47169 1442 aa1.34□□□□□ -2.19
ATG38YLR211C NHP6AP11632 93 aaKnown RBP1.34□□□□□ -2.19
ATG38YLR211C PHO13P19881 312 aa1.34□□□□□ -2.19
ATG38YLR211C SUA7P29055 345 aaPredicted RBP1.34□□□□□ -2.19
ATG38YLR211C MRPL24P36525 258 aaPredicted RBP1.34□□□□□ -2.19
ATG38YLR211C YHR022CP38763 256 aa1.34□□□□□ -2.19
ATG38YLR211C GAA1P39012 614 aa1.34□□□□□ -2.19
ATG38YLR211C GPI2P46961 280 aa1.34□□□□□ -2.19
ATG38YLR211C HHO1P53551 258 aa1.34□□□□□ -2.19
ATG38YLR211C TIM8P57744 87 aa1.34□□□□□ -2.19
ATG38YLR211C YDR366CP87287 132 aa1.34□□□□□ -2.19
ATG38YLR211C DYN2Q02647 92 aa1.34□□□□□ -2.19
ATG38YLR211C FMN1Q03778 218 aa1.34□□□□□ -2.19
ATG38YLR211C CUE4Q04201 117 aaPredicted RBP1.34□□□□□ -2.19
ATG38YLR211C MEU1Q07938 337 aaKnown RBP RIP-Chip data1.34□□□□□ -2.19not detected
Retrieved 100 of 5,963 RNA–protein pairs in 116 ms