RNA–Protein interactions for RNA: YLR093C

NYV1, Transcript of v-SNARE component of the vacuolar SNARE complex, yeastyeast

Gene NYV1, Length 762 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NYV1YLR093C YLR236CA0A023PZG4 107 aa1.7□□□□□ -2.14
NYV1YLR093C DDI2P0CH63 225 aa1.7□□□□□ -2.14
NYV1YLR093C DDI3P0CH64 225 aa1.7□□□□□ -2.14
NYV1YLR093C IDP1P21954 428 aaKnown RBP1.7□□□□□ -2.14
NYV1YLR093C FZF1P32805 299 aa1.7□□□□□ -2.14
NYV1YLR093C SFK1P35735 353 aa1.7□□□□□ -2.14
NYV1YLR093C NSA2P40078 261 aaKnown RBP1.7□□□□□ -2.14
NYV1YLR093C YNL217WP40152 326 aa1.7□□□□□ -2.14
NYV1YLR093C SOK1P40317 901 aa1.7□□□□□ -2.14
NYV1YLR093C DLS1P40366 167 aa1.7□□□□□ -2.14
NYV1YLR093C PKR1Q03880 122 aaKnown RBP1.7□□□□□ -2.14
NYV1YLR093C PBI2P0CT04 75 aaKnown RBP1.69□□□□□ -2.14
NYV1YLR093C RPL30P14120 105 aaKnown RBP1.69□□□□□ -2.14
NYV1YLR093C NSP1P14907 823 aaKnown RBP1.69□□□□□ -2.14
NYV1YLR093C PEX34P25584 144 aa1.69□□□□□ -2.14
NYV1YLR093C UPS2P35200 230 aa1.69□□□□□ -2.14
NYV1YLR093C YHR022CP38763 256 aa1.69□□□□□ -2.14
NYV1YLR093C DIG2Q03373 323 aaKnown RBP1.69□□□□□ -2.14
NYV1YLR093C SHH3Q04487 196 aa1.69□□□□□ -2.14
NYV1YLR093C YMR253CQ04835 414 aa1.69□□□□□ -2.14
NYV1YLR093C YMR320WQ04897 101 aa1.69□□□□□ -2.14
NYV1YLR093C SPC2Q04969 178 aa1.69□□□□□ -2.14
NYV1YLR093C YOR214CQ12282 236 aa1.69□□□□□ -2.14
NYV1YLR093C STP22P25604 385 aa1.68□□□□□ -2.14
NYV1YLR093C PAM17P36147 197 aa1.68□□□□□ -2.14
NYV1YLR093C RRT1P38192 103 aa1.68□□□□□ -2.14
NYV1YLR093C YBR209WP38311 105 aa1.68□□□□□ -2.14
NYV1YLR093C YBR220CP38318 560 aa1.68□□□□□ -2.14
NYV1YLR093C GAA1P39012 614 aa1.68□□□□□ -2.14
NYV1YLR093C CUP9P41817 306 aa1.68□□□□□ -2.14
NYV1YLR093C FIP1P45976 327 aa1.68□□□□□ -2.14
NYV1YLR093C POP3P53833 195 aaPredicted RBP1.68□□□□□ -2.14
NYV1YLR093C HHT1P61830 136 aa1.68□□□□□ -2.14
NYV1YLR093C CYT2Q00873 224 aa1.68□□□□□ -2.14
NYV1YLR093C YMR295CQ03559 197 aa1.68□□□□□ -2.14
NYV1YLR093C IRC23Q08416 157 aa1.68□□□□□ -2.14
NYV1YLR093C ATP5P09457 212 aa1.67□□□□□ -2.14
NYV1YLR093C AGE2P40529 298 aa1.67□□□□□ -2.14
NYV1YLR093C GLR1P41921 483 aaKnown RBP1.67□□□□□ -2.14
NYV1YLR093C DAN1P47178 298 aa1.67□□□□□ -2.14
NYV1YLR093C SBH1P52870 82 aa1.67□□□□□ -2.14
NYV1YLR093C ERG25P53045 309 aa1.67□□□□□ -2.14
NYV1YLR093C TIM13P53299 105 aa1.67□□□□□ -2.14
NYV1YLR093C YNL033WP53964 284 aa1.67□□□□□ -2.14
NYV1YLR093C YKR005CQ02203 525 aa1.67□□□□□ -2.14
NYV1YLR093C RNH202Q05635 350 aa1.67□□□□□ -2.14
NYV1YLR093C YOR381W-AQ3E804 55 aa1.67□□□□□ -2.14
NYV1YLR093C SEC11P15367 167 aa1.66□□□□□ -2.14
NYV1YLR093C HSP30P25619 332 aa1.66□□□□□ -2.14
NYV1YLR093C POP7P38291 140 aa1.66□□□□□ -2.14
NYV1YLR093C YAP3P38749 330 aa1.66□□□□□ -2.14
NYV1YLR093C CYC2P38909 366 aa1.66□□□□□ -2.14
NYV1YLR093C YER181CP40097 107 aa1.66□□□□□ -2.14
NYV1YLR093C YGR201CP42936 225 aa1.66□□□□□ -2.14
NYV1YLR093C RBL2P48606 106 aaKnown RBP1.66□□□□□ -2.14
NYV1YLR093C KNH1P50112 268 aa1.66□□□□□ -2.14
NYV1YLR093C VPS28Q02767 242 aa1.66□□□□□ -2.14
NYV1YLR093C YDR102CQ03864 110 aa1.66□□□□□ -2.14
NYV1YLR093C RAV2Q03956 351 aa1.66□□□□□ -2.14
NYV1YLR093C CUE4Q04201 117 aaPredicted RBP1.66□□□□□ -2.14
NYV1YLR093C PST2Q12335 198 aaKnown RBP1.66□□□□□ -2.14
NYV1YLR093C YOR1P53049 1477 aa1.66□□□□□ -2.14
NYV1YLR093C YPL073CP40323 161 aa1.65□□□□□ -2.15
NYV1YLR093C YJR015WP47090 510 aa1.65□□□□□ -2.15
NYV1YLR093C CCC1P47818 322 aa1.65□□□□□ -2.15
NYV1YLR093C SYM1Q06563 197 aa1.65□□□□□ -2.15
NYV1YLR093C HRD1Q08109 551 aa1.65□□□□□ -2.15
NYV1YLR093C RAD28Q12021 506 aa1.65□□□□□ -2.15
NYV1YLR093C RAD6P06104 172 aa1.64□□□□□ -2.15
NYV1YLR093C TFC1P32367 649 aa1.64□□□□□ -2.15
NYV1YLR093C TVP23P38962 199 aa1.64□□□□□ -2.15
NYV1YLR093C YEL073CP39974 107 aa1.64□□□□□ -2.15
NYV1YLR093C YEL028WP39989 153 aa1.64□□□□□ -2.15
NYV1YLR093C GIM4P40005 111 aaKnown RBP1.64□□□□□ -2.15
NYV1YLR093C PAC10P48363 199 aa1.64□□□□□ -2.15
NYV1YLR093C YGR042WP53227 271 aa1.64□□□□□ -2.15
NYV1YLR093C DAD4P69851 72 aa1.64□□□□□ -2.15
NYV1YLR093C SML1Q04964 104 aa1.64□□□□□ -2.15
NYV1YLR093C ANT1Q06497 328 aa1.64□□□□□ -2.15
NYV1YLR093C YOR015WQ12169 119 aa1.64□□□□□ -2.15
NYV1YLR093C SPT14P32363 452 aa1.63□□□□□ -2.15
NYV1YLR093C PTC1P35182 281 aa1.63□□□□□ -2.15
NYV1YLR093C YRA2P36036 203 aaKnown RBP RIP-Chip data1.63□□□□□ -2.15not detected
NYV1YLR093C YKR045CP36138 183 aa1.63□□□□□ -2.15
NYV1YLR093C YHL018WP38744 120 aaPredicted RBP1.63□□□□□ -2.15
NYV1YLR093C HTD2P38790 280 aaKnown RBP1.63□□□□□ -2.15
NYV1YLR093C DSE2P38844 325 aa1.63□□□□□ -2.15
NYV1YLR093C AYR1P40471 297 aa1.63□□□□□ -2.15
NYV1YLR093C YGL204CP53089 101 aa1.63□□□□□ -2.15
NYV1YLR093C THG1P53215 237 aaKnown RBP1.63□□□□□ -2.15
NYV1YLR093C CSN9Q03981 162 aa1.63□□□□□ -2.15
NYV1YLR093C RIM9Q04734 239 aa1.63□□□□□ -2.15
NYV1YLR093C YPD1Q07688 167 aa1.63□□□□□ -2.15
NYV1YLR093C YPR013CQ12145 317 aa1.63□□□□□ -2.15
NYV1YLR093C RIB3Q99258 208 aa1.63□□□□□ -2.15
NYV1YLR093C YOL162WP0CF19 215 aa1.62□□□□□ -2.15
NYV1YLR093C PHO13P19881 312 aa1.62□□□□□ -2.15
NYV1YLR093C MDH2P22133 377 aa1.62□□□□□ -2.15
NYV1YLR093C MRPL24P36525 258 aaPredicted RBP1.62□□□□□ -2.15
NYV1YLR093C YJL218WP40892 196 aaKnown RBP1.62□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 32.5 ms