RNA–Protein interactions for RNA: YLR022C

SDO1, Transcript of Guanine nucleotide exchange factor (GEF) for Ria1p, yeastyeast

Gene SDO1, Length 753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDO1YLR022C TMA19P35691 167 aaKnown RBP2.3□□□□□ -2.04
SDO1YLR022C MPC2P38857 129 aa2.3□□□□□ -2.04
SDO1YLR022C YGR201CP42936 225 aa2.3□□□□□ -2.04
SDO1YLR022C IRC18P47056 224 aa2.3□□□□□ -2.04
SDO1YLR022C FYV6P53913 173 aa2.3□□□□□ -2.04
SDO1YLR022C YHP1Q04116 353 aa2.3□□□□□ -2.04
SDO1YLR022C PEX10Q05568 337 aa2.3□□□□□ -2.04
SDO1YLR022C NNT1Q05874 261 aa2.3□□□□□ -2.04
SDO1YLR022C SYC1Q08553 188 aaPredicted RBP2.3□□□□□ -2.04
SDO1YLR022C ATP16Q12165 160 aa2.3□□□□□ -2.04
SDO1YLR022C RFM1Q12192 310 aa2.3□□□□□ -2.04
SDO1YLR022C MHF2Q3E829 80 aa2.3□□□□□ -2.04
SDO1YLR022C YMR316C-AI2HB70 103 aa2.29□□□□□ -2.04
SDO1YLR022C FBA1P14540 359 aaKnown RBP2.29□□□□□ -2.04
SDO1YLR022C RFA3P26755 122 aaKnown RBP2.29□□□□□ -2.04
SDO1YLR022C ECM33P38248 429 aaKnown RBP2.29□□□□□ -2.04
SDO1YLR022C SHG1P38337 142 aa2.29□□□□□ -2.04
SDO1YLR022C CHL4P38907 458 aa2.29□□□□□ -2.04
SDO1YLR022C MIG3P39943 394 aa2.29□□□□□ -2.04
SDO1YLR022C MGA1P53050 456 aa2.29□□□□□ -2.04
SDO1YLR022C TOS8P53147 276 aa2.29□□□□□ -2.04
SDO1YLR022C YNR066CP53752 436 aa2.29□□□□□ -2.04
SDO1YLR022C TPS1Q00764 495 aaKnown RBP2.29□□□□□ -2.04
SDO1YLR022C NUP49Q02199 472 aa2.29□□□□□ -2.04
SDO1YLR022C ATO3Q12359 275 aa2.29□□□□□ -2.04
SDO1YLR022C YDR157WA0A023PZE8 133 aa2.28□□□□□ -2.04
SDO1YLR022C DPB2P24482 689 aaPredicted RBP2.28□□□□□ -2.04
SDO1YLR022C MRPL17P36528 281 aa2.28□□□□□ -2.04
SDO1YLR022C PET8P38921 284 aa2.28□□□□□ -2.04
SDO1YLR022C BMT5P40493 336 aa2.28□□□□□ -2.04
SDO1YLR022C MCM22P47167 239 aa2.28□□□□□ -2.04
SDO1YLR022C MRH4P53166 561 aa2.28□□□□□ -2.04
SDO1YLR022C SDS23P53172 527 aa2.28□□□□□ -2.04
SDO1YLR022C SLX9P53251 210 aaPredicted RBP2.28□□□□□ -2.04
SDO1YLR022C YML108WQ03759 105 aa2.28□□□□□ -2.04
SDO1YLR022C TVP15Q03860 143 aa2.28□□□□□ -2.04
SDO1YLR022C BBP1Q12365 385 aa2.28□□□□□ -2.04
SDO1YLR022C KIN28P06242 306 aa2.27□□□□□ -2.05
SDO1YLR022C NTF2P33331 125 aaKnown RBP2.27□□□□□ -2.05
SDO1YLR022C NUF2P33895 451 aa2.27□□□□□ -2.05
SDO1YLR022C MED8P38304 223 aa2.27□□□□□ -2.05
SDO1YLR022C POG1P40473 351 aa2.27□□□□□ -2.05
SDO1YLR022C YGL159WP53110 370 aa2.27□□□□□ -2.05
SDO1YLR022C CRH1P53301 507 aa2.27□□□□□ -2.05
SDO1YLR022C RRP17Q04031 235 aaPredicted RBP2.27□□□□□ -2.05
SDO1YLR022C LIP2Q06005 328 aa2.27□□□□□ -2.05
SDO1YLR022C RFU1Q08003 200 aa2.27□□□□□ -2.05
SDO1YLR022C YOR292CQ08743 309 aa2.27□□□□□ -2.05
SDO1YLR022C QCR2P07257 368 aa2.26□□□□□ -2.05
SDO1YLR022C URA6P15700 204 aa2.26□□□□□ -2.05
SDO1YLR022C HYM1P32464 399 aa2.26□□□□□ -2.05
SDO1YLR022C SRP102P36057 244 aaPredicted RBP2.26□□□□□ -2.05
SDO1YLR022C MRPL3P36516 390 aa2.26□□□□□ -2.05
SDO1YLR022C MBA1P38300 278 aa2.26□□□□□ -2.05
SDO1YLR022C GOS1P38736 223 aa2.26□□□□□ -2.05
SDO1YLR022C SRP14P38985 146 aa2.26□□□□□ -2.05
SDO1YLR022C ATG18P43601 500 aa2.26□□□□□ -2.05
SDO1YLR022C BAT2P47176 376 aaKnown RBP2.26□□□□□ -2.05
SDO1YLR022C NIF3P53081 288 aa2.26□□□□□ -2.05
SDO1YLR022C ALG13P53178 202 aa2.26□□□□□ -2.05
SDO1YLR022C RPL21AQ02753 160 aaKnown RBP2.26□□□□□ -2.05
SDO1YLR022C MIX17Q03667 156 aa2.26□□□□□ -2.05
SDO1YLR022C AIM36Q03798 255 aa2.26□□□□□ -2.05
SDO1YLR022C RNH202Q05635 350 aa2.26□□□□□ -2.05
SDO1YLR022C DXO1Q06349 442 aa2.26□□□□□ -2.05
SDO1YLR022C YLR126CQ12288 251 aa2.26□□□□□ -2.05
SDO1YLR022C RPL21BQ12672 160 aaKnown RBP2.26□□□□□ -2.05
SDO1YLR022C YOL162WP0CF19 215 aa2.25□□□□□ -2.05
SDO1YLR022C RPL30P14120 105 aaKnown RBP2.25□□□□□ -2.05
SDO1YLR022C IMP1P28627 190 aa2.25□□□□□ -2.05
SDO1YLR022C SKG1P36169 355 aa2.25□□□□□ -2.05
SDO1YLR022C STB1P42845 420 aa2.25□□□□□ -2.05
SDO1YLR022C TMA22P47089 198 aaPredicted RBP2.25□□□□□ -2.05
SDO1YLR022C TTI2P47168 421 aa2.25□□□□□ -2.05
SDO1YLR022C BNS1P50084 137 aa2.25□□□□□ -2.05
SDO1YLR022C MMS2P53152 137 aa2.25□□□□□ -2.05
SDO1YLR022C PDR17P53844 350 aa2.25□□□□□ -2.05
SDO1YLR022C GCN3P14741 305 aa2.24□□□□□ -2.05
SDO1YLR022C STF2P16965 84 aa2.24□□□□□ -2.05
SDO1YLR022C CCA1P21269 546 aa2.24□□□□□ -2.05
SDO1YLR022C TRR1P29509 319 aaKnown RBP2.24□□□□□ -2.05
SDO1YLR022C FRM2P37261 193 aa2.24□□□□□ -2.05
SDO1YLR022C SHE1P38200 338 aa2.24□□□□□ -2.05
SDO1YLR022C AME1P38313 324 aa2.24□□□□□ -2.05
SDO1YLR022C OXA1P39952 402 aa2.24□□□□□ -2.05
SDO1YLR022C SMX2P40204 77 aaKnown RBP2.24□□□□□ -2.05
SDO1YLR022C TIR3P40552 269 aa2.24□□□□□ -2.05
SDO1YLR022C ILM1P47155 203 aa2.24□□□□□ -2.05
SDO1YLR022C OST3P48439 350 aa2.24□□□□□ -2.05
SDO1YLR022C HHT1P61830 136 aa2.24□□□□□ -2.05
SDO1YLR022C YKR005CQ02203 525 aa2.24□□□□□ -2.05
SDO1YLR022C YNG1Q08465 219 aa2.24□□□□□ -2.05
SDO1YLR022C RIB3Q99258 208 aa2.24□□□□□ -2.05
SDO1YLR022C REP2P03872 296 aa2.23□□□□□ -2.05
SDO1YLR022C CDC50P25656 391 aa2.23□□□□□ -2.05
SDO1YLR022C MRPS9P38120 278 aa2.23□□□□□ -2.05
SDO1YLR022C SSH1P38353 490 aaKnown RBP2.23□□□□□ -2.05
SDO1YLR022C BXI1P48558 297 aa2.23□□□□□ -2.05
SDO1YLR022C YIP3P53633 176 aa2.23□□□□□ -2.05
SDO1YLR022C AAH1P53909 347 aa2.23□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 53.3 ms