RNA–Protein interactions for RNA: YKL135C

APL2, Transcript of Beta-adaptin subunit of the clathrin-associated protein (AP-1) complex, yeast

Gene APL2, Length 2,181 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
APL2	YKL135C	RPB4	P20433	221 aa	Predicted RBP	0.82	□□□□□ -2.28
APL2	YKL135C	VPS55	P47111	140 aa		0.82	□□□□□ -2.28
APL2	YKL135C	RMR1	P53060	241 aa		0.82	□□□□□ -2.28
APL2	YKL135C	GTR2	P53290	341 aa		0.82	□□□□□ -2.28
APL2	YKL135C	RRN5	Q02983	363 aa		0.82	□□□□□ -2.28
APL2	YKL135C	FAR8	Q05040	523 aa		0.82	□□□□□ -2.28
APL2	YKL135C	ARR2	Q06597	130 aa		0.82	□□□□□ -2.28
APL2	YKL135C	RPL9A	P05738	191 aa	Known RBP	0.81	□□□□□ -2.28
APL2	YKL135C	MGT1	P26188	188 aa		0.81	□□□□□ -2.28
APL2	YKL135C	SSO1	P32867	290 aa		0.81	□□□□□ -2.28
APL2	YKL135C	FCY21	P40039	528 aa		0.81	□□□□□ -2.28
APL2	YKL135C	THO1	P40040	218 aa	Known RBP	0.81	□□□□□ -2.28
APL2	YKL135C	YRB1	P41920	201 aa	Known RBP	0.81	□□□□□ -2.28
APL2	YKL135C	ILM1	P47155	203 aa		0.81	□□□□□ -2.28
APL2	YKL135C	RPL9B	P51401	191 aa	Known RBP	0.81	□□□□□ -2.28
APL2	YKL135C	YHP1	Q04116	353 aa		0.81	□□□□□ -2.28
APL2	YKL135C	SSQ1	Q05931	657 aa	Predicted RBP	0.81	□□□□□ -2.28
APL2	YKL135C	LCL2	Q08045	131 aa		0.81	□□□□□ -2.28
APL2	YKL135C	PRM3	Q08931	133 aa		0.81	□□□□□ -2.28
APL2	YKL135C	CSM4	Q08955	156 aa		0.81	□□□□□ -2.28
APL2	YKL135C	YOR343C	Q12484	108 aa		0.81	□□□□□ -2.28
APL2	YKL135C	DDP1	Q99321	188 aa	Known RBP	0.81	□□□□□ -2.28
APL2	YKL135C	FBA1	P14540	359 aa	Known RBP	0.81	□□□□□ -2.28
APL2	YKL135C	YCR016W	P25617	290 aa	Known RBP	0.81	□□□□□ -2.28
APL2	YKL135C	RPS1A	P33442	255 aa	Known RBP	0.81	□□□□□ -2.28
APL2	YKL135C	MSN4	P33749	630 aa		0.81	□□□□□ -2.28
APL2	YKL135C	YCR087C-A	P37263	153 aa		0.81	□□□□□ -2.28
APL2	YKL135C	MPC2	P38857	129 aa		0.81	□□□□□ -2.28
APL2	YKL135C	FLX1	P40464	311 aa		0.81	□□□□□ -2.28
APL2	YKL135C	CAT5	P41735	233 aa		0.81	□□□□□ -2.28
APL2	YKL135C	YGR219W	P53307	113 aa		0.81	□□□□□ -2.28
APL2	YKL135C	YDC1	Q02896	317 aa		0.81	□□□□□ -2.28
APL2	YKL135C	YDR102C	Q03864	110 aa		0.81	□□□□□ -2.28
APL2	YKL135C	YOR214C	Q12282	236 aa		0.81	□□□□□ -2.28
APL2	YKL135C	YMR105W-A	Q8TGS8	64 aa		0.81	□□□□□ -2.28
APL2	YKL135C	MSW1	P04803	379 aa		0.8	□□□□□ -2.28
APL2	YKL135C	GRX2	P17695	143 aa	Known RBP	0.8	□□□□□ -2.28
APL2	YKL135C	MRPL25	P23369	157 aa		0.8	□□□□□ -2.28
APL2	YKL135C	FMC1	P40491	155 aa		0.8	□□□□□ -2.28
APL2	YKL135C	ERG25	P53045	309 aa		0.8	□□□□□ -2.28
APL2	YKL135C	RCF2	P53721	224 aa		0.8	□□□□□ -2.28
APL2	YKL135C	MRPS8	Q03799	155 aa		0.8	□□□□□ -2.28
APL2	YKL135C	ATG31	Q12421	196 aa		0.8	□□□□□ -2.28
APL2	YKL135C	BOL1	Q3E793	110 aa		0.8	□□□□□ -2.28
APL2	YKL135C	YOR020W-A	Q3E824	90 aa		0.8	□□□□□ -2.28
APL2	YKL135C	PHO85	P17157	305 aa		0.8	□□□□□ -2.28
APL2	YKL135C	RPC19	P28000	142 aa	Known RBP	0.8	□□□□□ -2.28
APL2	YKL135C	PEX4	P29340	183 aa		0.8	□□□□□ -2.28
APL2	YKL135C	ECM31	P38122	312 aa		0.8	□□□□□ -2.28
APL2	YKL135C	VTC1	P40046	129 aa	RIP-Chip data	0.8	□□□□□ -2.28	not detected
APL2	YKL135C	SMD3	P43321	101 aa	Known RBP	0.8	□□□□□ -2.28
APL2	YKL135C	EFM5	P53200	248 aa	Known RBP	0.8	□□□□□ -2.28
APL2	YKL135C	MET31	Q03081	177 aa		0.8	□□□□□ -2.28
APL2	YKL135C	YMD8	Q03697	442 aa		0.8	□□□□□ -2.28
APL2	YKL135C	SIR2	P06700	562 aa		0.79	□□□□□ -2.28
APL2	YKL135C	YNL200C	P40165	246 aa	Known RBP	0.79	□□□□□ -2.28
APL2	YKL135C	BMT5	P40493	336 aa		0.79	□□□□□ -2.28
APL2	YKL135C	HAM1	P47119	197 aa	Known RBP	0.79	□□□□□ -2.28
APL2	YKL135C	CYT2	Q00873	224 aa		0.79	□□□□□ -2.28
APL2	YKL135C	KRE28	Q04431	385 aa		0.79	□□□□□ -2.28
APL2	YKL135C	YMR030W-A	Q3E760	96 aa		0.79	□□□□□ -2.28
APL2	YKL135C	YPR170W-B	P0C5R9	85 aa		0.79	□□□□□ -2.28
APL2	YKL135C	YOL162W	P0CF19	215 aa		0.79	□□□□□ -2.28
APL2	YKL135C	MATALPHA1	P0CY06	175 aa		0.79	□□□□□ -2.28
APL2	YKL135C	HMLALPHA1	P0CY07	175 aa		0.79	□□□□□ -2.28
APL2	YKL135C	NMT1	P14743	455 aa		0.79	□□□□□ -2.28
APL2	YKL135C	CDC10	P25342	322 aa	Known RBP	0.79	□□□□□ -2.28
APL2	YKL135C	HSP30	P25619	332 aa		0.79	□□□□□ -2.28
APL2	YKL135C	OAC1	P32332	324 aa		0.79	□□□□□ -2.28
APL2	YKL135C	YBR063C	P38083	404 aa		0.79	□□□□□ -2.28
APL2	YKL135C	ERV15	P38312	142 aa		0.79	□□□□□ -2.28
APL2	YKL135C	RMD6	P39975	231 aa		0.79	□□□□□ -2.28
APL2	YKL135C	PEP8	P40335	379 aa		0.79	□□□□□ -2.28
APL2	YKL135C	LIA1	P47120	325 aa	Known RBP	0.79	□□□□□ -2.28
APL2	YKL135C	XPT1	P47165	209 aa		0.79	□□□□□ -2.28
APL2	YKL135C	DAD3	P69850	94 aa		0.79	□□□□□ -2.28
APL2	YKL135C	HPT1	Q04178	221 aa	Known RBP	0.79	□□□□□ -2.28
APL2	YKL135C	YPL229W	Q99395	206 aa		0.79	□□□□□ -2.28
APL2	YKL135C	GPA2	P10823	449 aa		0.78	□□□□□ -2.28
APL2	YKL135C	ERD2	P18414	219 aa		0.78	□□□□□ -2.28
APL2	YKL135C	YCR090C	P25654	182 aa	Known RBP	0.78	□□□□□ -2.28
APL2	YKL135C	YHR022C	P38763	256 aa		0.78	□□□□□ -2.28
APL2	YKL135C	FMP32	P43557	207 aa		0.78	□□□□□ -2.28
APL2	YKL135C	COX12	Q01519	83 aa		0.78	□□□□□ -2.28
APL2	YKL135C	DIG2	Q03373	323 aa	Known RBP	0.78	□□□□□ -2.28
APL2	YKL135C	NEJ1	Q06148	342 aa		0.78	□□□□□ -2.28
APL2	YKL135C	HEM25	Q07534	307 aa		0.78	□□□□□ -2.28
APL2	YKL135C	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	0.78	□□□□□ -2.28	not detected
APL2	YKL135C	KIN28	P06242	306 aa		0.77	□□□□□ -2.29
APL2	YKL135C	YKL075C	P36083	450 aa		0.77	□□□□□ -2.29
APL2	YKL135C	ECM33	P38248	429 aa	Known RBP	0.77	□□□□□ -2.29
APL2	YKL135C	POP4	P38336	279 aa		0.77	□□□□□ -2.29
APL2	YKL135C	RPF1	P38805	295 aa	Known RBP	0.77	□□□□□ -2.29
APL2	YKL135C	YJR056C	P47115	236 aa		0.77	□□□□□ -2.29
APL2	YKL135C	PAC10	P48363	199 aa		0.77	□□□□□ -2.29
APL2	YKL135C	AIF1	P52923	378 aa		0.77	□□□□□ -2.29
APL2	YKL135C	TOS8	P53147	276 aa		0.77	□□□□□ -2.29
APL2	YKL135C	SRL4	Q03085	281 aa		0.77	□□□□□ -2.29
APL2	YKL135C	CSN9	Q03981	162 aa		0.77	□□□□□ -2.29
APL2	YKL135C	DAS2	Q12084	232 aa		0.77	□□□□□ -2.29

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