RNA–Protein interactions for RNA: YKL130C

SHE2, Transcript of RNA-binding protein that binds specific mRNAs and interacts with She3p, yeastyeast

Gene SHE2, Length 741 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHE2YKL130C GVP36P40531 326 aaKnown RBP1.51□□□□□ -2.17
SHE2YKL130C PRM10P42946 383 aa1.51□□□□□ -2.17
SHE2YKL130C SKI6P46948 246 aaPredicted RBP1.51□□□□□ -2.17
SHE2YKL130C TMA22P47089 198 aaPredicted RBP1.51□□□□□ -2.17
SHE2YKL130C ARP3P47117 449 aaKnown RBP1.51□□□□□ -2.17
SHE2YKL130C YJR146WP47174 117 aa1.51□□□□□ -2.17
SHE2YKL130C ARO8P53090 500 aaKnown RBP1.51□□□□□ -2.17
SHE2YKL130C HPT1Q04178 221 aaKnown RBP1.51□□□□□ -2.17
SHE2YKL130C SHH4Q06236 168 aa1.51□□□□□ -2.17
SHE2YKL130C BRX1Q08235 291 aaKnown RBP1.51□□□□□ -2.17
SHE2YKL130C DGA1Q08650 418 aa1.51□□□□□ -2.17
SHE2YKL130C VPS68Q12016 184 aa1.51□□□□□ -2.17
SHE2YKL130C ATO3Q12359 275 aa1.51□□□□□ -2.17
SHE2YKL130C YRF1-3P0CX14 1859 aa1.5□□□□□ -2.17
SHE2YKL130C YRF1-7P0CX15 1859 aa1.5□□□□□ -2.17
SHE2YKL130C YRF1-6P53819 1859 aa1.5□□□□□ -2.17
SHE2YKL130C CMD1P06787 147 aaKnown RBP1.5□□□□□ -2.17
SHE2YKL130C ATP15P21306 62 aa1.5□□□□□ -2.17
SHE2YKL130C ARO7P32178 256 aa1.5□□□□□ -2.17
SHE2YKL130C YHR180WP38868 163 aa1.5□□□□□ -2.17
SHE2YKL130C MTW1P39731 289 aa1.5□□□□□ -2.17
SHE2YKL130C YER076CP40049 302 aa1.5□□□□□ -2.17
SHE2YKL130C CIS3P47001 227 aa1.5□□□□□ -2.17
SHE2YKL130C TDA4P47153 279 aa1.5□□□□□ -2.17
SHE2YKL130C PGA1P53896 198 aa1.5□□□□□ -2.17
SHE2YKL130C DAD3P69850 94 aa1.5□□□□□ -2.17
SHE2YKL130C DYN3Q04949 312 aa1.5□□□□□ -2.17
SHE2YKL130C HRT1Q08273 121 aa1.5□□□□□ -2.17
SHE2YKL130C MPD1Q12404 318 aaKnown RBP1.5□□□□□ -2.17
SHE2YKL130C EMC6Q12431 108 aa1.5□□□□□ -2.17
SHE2YKL130C PEX11Q12462 236 aa1.5□□□□□ -2.17
SHE2YKL130C OCH1P31755 480 aa1.49□□□□□ -2.17
SHE2YKL130C UTR5P32630 166 aa1.49□□□□□ -2.17
SHE2YKL130C YET1P35723 206 aa1.49□□□□□ -2.17
SHE2YKL130C TVP38P36164 337 aa1.49□□□□□ -2.17
SHE2YKL130C ERV15P38312 142 aa1.49□□□□□ -2.17
SHE2YKL130C YBR285WP38354 144 aa1.49□□□□□ -2.17
SHE2YKL130C AVT2P39981 480 aa1.49□□□□□ -2.17
SHE2YKL130C YEA4P40004 342 aa1.49□□□□□ -2.17
SHE2YKL130C YER134CP40081 178 aa1.49□□□□□ -2.17
SHE2YKL130C YKE4P40544 346 aa1.49□□□□□ -2.17
SHE2YKL130C RPL33BP41056 107 aaKnown RBP1.49□□□□□ -2.17
SHE2YKL130C SER2P42941 309 aa1.49□□□□□ -2.17
SHE2YKL130C YJR111CP47148 283 aaKnown RBP1.49□□□□□ -2.17
SHE2YKL130C YNR062CP53748 327 aa1.49□□□□□ -2.17
SHE2YKL130C YDR274CP87283 123 aa1.49□□□□□ -2.17
SHE2YKL130C NUP49Q02199 472 aa1.49□□□□□ -2.17
SHE2YKL130C MIX17Q03667 156 aa1.49□□□□□ -2.17
SHE2YKL130C GPI17Q04080 534 aa1.49□□□□□ -2.17
SHE2YKL130C SPG3Q04398 127 aaPredicted RBP1.49□□□□□ -2.17
SHE2YKL130C YLR053CQ12026 108 aa1.49□□□□□ -2.17
SHE2YKL130C ODC2Q99297 307 aa1.49□□□□□ -2.17
SHE2YKL130C PDR18P53756 1333 aa1.48□□□□□ -2.17
SHE2YKL130C CPA1P07258 411 aaKnown RBP1.48□□□□□ -2.17
SHE2YKL130C UBC6P33296 250 aaPredicted RBP1.48□□□□□ -2.17
SHE2YKL130C YKL102CP34249 101 aa1.48□□□□□ -2.17
SHE2YKL130C YOR062CP36025 268 aa1.48□□□□□ -2.17
SHE2YKL130C FMP23P38231 175 aa1.48□□□□□ -2.17
SHE2YKL130C OPY1P38271 328 aa1.48□□□□□ -2.17
SHE2YKL130C TIR3P40552 269 aa1.48□□□□□ -2.17
SHE2YKL130C DOC1P53068 250 aa1.48□□□□□ -2.17
SHE2YKL130C MRPS8Q03799 155 aa1.48□□□□□ -2.17
SHE2YKL130C MEU1Q07938 337 aaKnown RBP RIP-Chip data1.48□□□□□ -2.17not detected
SHE2YKL130C FSF1Q12029 327 aaKnown RBP1.48□□□□□ -2.17
SHE2YKL130C RIM15P43565 1770 aa1.47□□□□□ -2.17
SHE2YKL130C RPS28BP0C0X0 67 aaKnown RBP1.47□□□□□ -2.17
SHE2YKL130C PEX4P29340 183 aa1.47□□□□□ -2.17
SHE2YKL130C KDX1P36005 433 aa1.47□□□□□ -2.17
SHE2YKL130C SHE2P36068 246 aaKnown RBP RIP-Chip data1.47□□□□□ -2.17not detected
SHE2YKL130C PAN3P36102 679 aaPredicted RBP1.47□□□□□ -2.17
SHE2YKL130C FIG1P38224 298 aa1.47□□□□□ -2.17
SHE2YKL130C PHO88P38264 188 aaPredicted RBP1.47□□□□□ -2.17
SHE2YKL130C ERG25P53045 309 aa1.47□□□□□ -2.17
SHE2YKL130C MAK3Q03503 176 aa1.47□□□□□ -2.17
SHE2YKL130C YOL014WQ08110 124 aa1.47□□□□□ -2.17
SHE2YKL130C NSL1Q12143 216 aa1.47□□□□□ -2.17
SHE2YKL130C YOR342CQ12182 319 aa1.47□□□□□ -2.17
SHE2YKL130C RDI1Q12434 202 aa1.47□□□□□ -2.17
SHE2YKL130C YDR524C-BQ3E6R4 66 aa1.47□□□□□ -2.17
SHE2YKL130C YLR412C-AQ3E742 68 aa1.47□□□□□ -2.17
SHE2YKL130C RPS28AQ3E7X9 67 aaPredicted RBP1.47□□□□□ -2.17
SHE2YKL130C YML100W-AQ8TGT0 57 aa1.47□□□□□ -2.17
SHE2YKL130C MLP1Q02455 1875 aaKnown RBP1.47□□□□□ -2.17
SHE2YKL130C FLO1P32768 1537 aa1.46□□□□□ -2.18
SHE2YKL130C YAR023CD6VPM8 179 aa1.46□□□□□ -2.18
SHE2YKL130C SCL1P21243 252 aaKnown RBP1.46□□□□□ -2.18
SHE2YKL130C DER1P38307 211 aa1.46□□□□□ -2.18
SHE2YKL130C NSG1P38837 291 aa1.46□□□□□ -2.18
SHE2YKL130C SVP26P38869 228 aa1.46□□□□□ -2.18
SHE2YKL130C EDC3P39998 551 aaKnown RBP1.46□□□□□ -2.18
SHE2YKL130C FCY21P40039 528 aa1.46□□□□□ -2.18
SHE2YKL130C YNL217WP40152 326 aa1.46□□□□□ -2.18
SHE2YKL130C RFC2P40348 353 aa1.46□□□□□ -2.18
SHE2YKL130C GPI14P47088 403 aaKnown RBP1.46□□□□□ -2.18
SHE2YKL130C XPT1P47165 209 aa1.46□□□□□ -2.18
SHE2YKL130C YGL235WP53071 178 aa1.46□□□□□ -2.18
SHE2YKL130C MPA43P53583 542 aaPredicted RBP1.46□□□□□ -2.18
SHE2YKL130C TMA20P89886 181 aaPredicted RBP1.46□□□□□ -2.18
SHE2YKL130C VPS71Q03433 280 aa1.46□□□□□ -2.18
SHE2YKL130C CGI121Q03705 181 aaKnown RBP1.46□□□□□ -2.18
Retrieved 100 of 5,963 RNA–protein pairs in 74.6 ms