RNA–Protein interactions for RNA: YKL042W

SPC42, Transcript of Central plaque component of spindle pole body (SPB), yeastyeast

Gene SPC42, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPC42YKL042W RPS28BP0C0X0 67 aaKnown RBP3.01□□□□□ -1.93
SPC42YKL042W YBR219CP38317 127 aa3.01□□□□□ -1.93
SPC42YKL042W EDC3P39998 551 aaKnown RBP3.01□□□□□ -1.93
SPC42YKL042W YNL033WP53964 284 aa3.01□□□□□ -1.93
SPC42YKL042W DAS2Q12084 232 aa3.01□□□□□ -1.93
SPC42YKL042W RPS28AQ3E7X9 67 aaPredicted RBP3.01□□□□□ -1.93
SPC42YKL042W PHO85P17157 305 aa3□□□□□ -1.93
SPC42YKL042W STP22P25604 385 aa3□□□□□ -1.93
SPC42YKL042W FIG1P38224 298 aa3□□□□□ -1.93
SPC42YKL042W DER1P38307 211 aa3□□□□□ -1.93
SPC42YKL042W YPL073CP40323 161 aa3□□□□□ -1.93
SPC42YKL042W GAL83Q04739 417 aa3□□□□□ -1.93
SPC42YKL042W YPR174CQ06616 221 aaPredicted RBP3□□□□□ -1.93
SPC42YKL042W NSL1Q12143 216 aa3□□□□□ -1.93
SPC42YKL042W ATP20Q12233 115 aa3□□□□□ -1.93
SPC42YKL042W CSH1P38287 376 aa2.99□□□□□ -1.93
SPC42YKL042W TIM13P53299 105 aa2.99□□□□□ -1.93
SPC42YKL042W THI74Q04083 370 aa2.99□□□□□ -1.93
SPC42YKL042W YPR127WQ06494 345 aa2.99□□□□□ -1.93
SPC42YKL042W YOR214CQ12282 236 aa2.99□□□□□ -1.93
SPC42YKL042W YCR023CP25351 611 aa2.98□□□□□ -1.93
SPC42YKL042W YKR045CP36138 183 aa2.98□□□□□ -1.93
SPC42YKL042W VPS28Q02767 242 aa2.98□□□□□ -1.93
SPC42YKL042W YDR476CQ03362 224 aa2.98□□□□□ -1.93
SPC42YKL042W CPR5P35176 225 aa2.97□□□□□ -1.93
SPC42YKL042W YGL101WP53144 215 aa2.97□□□□□ -1.93
SPC42YKL042W RNH202Q05635 350 aa2.97□□□□□ -1.93
SPC42YKL042W PRP11Q07350 266 aaPredicted RBP2.97□□□□□ -1.93
SPC42YKL042W YPR013CQ12145 317 aa2.97□□□□□ -1.93
SPC42YKL042W NUF2P33895 451 aa2.96□□□□□ -1.94
SPC42YKL042W FYV4P38783 130 aaPredicted RBP2.96□□□□□ -1.94
SPC42YKL042W YNL200CP40165 246 aaKnown RBP2.96□□□□□ -1.94
SPC42YKL042W SBH2P52871 88 aa2.96□□□□□ -1.94
SPC42YKL042W YLR162WQ06235 118 aa2.96□□□□□ -1.94
SPC42YKL042W HSP30P25619 332 aa2.95□□□□□ -1.94
SPC42YKL042W RRT1P38192 103 aa2.95□□□□□ -1.94
SPC42YKL042W YKR005CQ02203 525 aa2.95□□□□□ -1.94
SPC42YKL042W YBR220CP38318 560 aa2.94□□□□□ -1.94
SPC42YKL042W SLM6P38343 150 aa2.94□□□□□ -1.94
SPC42YKL042W GLR1P41921 483 aaKnown RBP2.94□□□□□ -1.94
SPC42YKL042W CSI2Q08054 341 aa2.94□□□□□ -1.94
SPC42YKL042W PET20Q99373 253 aa2.94□□□□□ -1.94
SPC42YKL042W UBI4P0CG63 381 aaKnown RBP2.93□□□□□ -1.94
SPC42YKL042W BUB2P26448 306 aaPredicted RBP2.93□□□□□ -1.94
SPC42YKL042W YHL018WP38744 120 aaPredicted RBP2.93□□□□□ -1.94
SPC42YKL042W LSM3P57743 89 aaKnown RBP2.93□□□□□ -1.94
SPC42YKL042W DAD4P69851 72 aa2.93□□□□□ -1.94
SPC42YKL042W YHR007C-AQ07074 71 aa2.93□□□□□ -1.94
SPC42YKL042W COX8P04039 78 aa2.92□□□□□ -1.94
SPC42YKL042W GSP2P32836 220 aaKnown RBP2.92□□□□□ -1.94
SPC42YKL042W SFK1P35735 353 aa2.92□□□□□ -1.94
SPC42YKL042W YER135CP40082 130 aa2.92□□□□□ -1.94
SPC42YKL042W BAT2P47176 376 aaKnown RBP2.92□□□□□ -1.94
SPC42YKL042W GRX5Q02784 150 aa2.92□□□□□ -1.94
SPC42YKL042W EFG1Q3E705 233 aaKnown RBP2.92□□□□□ -1.94
SPC42YKL042W MDM35O60200 86 aa2.91□□□□□ -1.94
SPC42YKL042W RAD6P06104 172 aa2.91□□□□□ -1.94
SPC42YKL042W RIO2P40160 425 aaKnown RBP2.91□□□□□ -1.94
SPC42YKL042W THG1P53215 237 aaKnown RBP2.91□□□□□ -1.94
SPC42YKL042W PIR1Q03178 341 aa2.91□□□□□ -1.94
SPC42YKL042W YPR202WQ08993 238 aa2.91□□□□□ -1.94
SPC42YKL042W MSB2P32334 1306 aa2.91□□□□□ -1.94
SPC42YKL042W RPL13BP40212 199 aaKnown RBP2.9□□□□□ -1.95
SPC42YKL042W YOR015WQ12169 119 aa2.9□□□□□ -1.95
SPC42YKL042W RPL13AQ12690 199 aaPredicted RBP2.9□□□□□ -1.95
SPC42YKL042W TRM3Q07527 1436 aa2.9□□□□□ -1.95
SPC42YKL042W YOL162WP0CF19 215 aa2.89□□□□□ -1.95
SPC42YKL042W RPL2AP0CX45 254 aaKnown RBP2.89□□□□□ -1.95
SPC42YKL042W RPL2BP0CX46 254 aaKnown RBP2.89□□□□□ -1.95
SPC42YKL042W ORM1P53224 222 aa2.89□□□□□ -1.95
SPC42YKL042W QCR8P08525 94 aa2.88□□□□□ -1.95
SPC42YKL042W PBI2P0CT04 75 aaKnown RBP2.88□□□□□ -1.95
SPC42YKL042W GPA2P10823 449 aa2.88□□□□□ -1.95
SPC42YKL042W YGL010WP25338 174 aa2.88□□□□□ -1.95
SPC42YKL042W PEX34P25584 144 aa2.88□□□□□ -1.95
SPC42YKL042W SYM1Q06563 197 aa2.88□□□□□ -1.95
SPC42YKL042W FIT2Q08906 153 aa2.88□□□□□ -1.95
SPC42YKL042W YEL028WP39989 153 aa2.87□□□□□ -1.95
SPC42YKL042W DLS1P40366 167 aa2.87□□□□□ -1.95
SPC42YKL042W APQ12P40532 138 aa2.87□□□□□ -1.95
SPC42YKL042W YLR046CQ12253 270 aa2.87□□□□□ -1.95
SPC42YKL042W YOR381W-AQ3E804 55 aa2.87□□□□□ -1.95
SPC42YKL042W ATP5P09457 212 aa2.86□□□□□ -1.95
SPC42YKL042W RPL30P14120 105 aaKnown RBP2.86□□□□□ -1.95
SPC42YKL042W PTC1P35182 281 aa2.86□□□□□ -1.95
SPC42YKL042W UPS2P35200 230 aa2.86□□□□□ -1.95
SPC42YKL042W NQM1P53228 333 aaPredicted RBP2.86□□□□□ -1.95
SPC42YKL042W DML1Q03652 475 aa2.86□□□□□ -1.95
SPC42YKL042W PST2Q12335 198 aaKnown RBP2.86□□□□□ -1.95
SPC42YKL042W FAS1P07149 2051 aaKnown RBP2.86□□□□□ -1.95
SPC42YKL042W ALB1P47019 175 aaPredicted RBP2.85□□□□□ -1.95
SPC42YKL042W HHT1P61830 136 aa2.85□□□□□ -1.95
SPC42YKL042W RRP17Q04031 235 aaPredicted RBP2.85□□□□□ -1.95
SPC42YKL042W RIM9Q04734 239 aa2.85□□□□□ -1.95
SPC42YKL042W UPS1Q05776 175 aa2.85□□□□□ -1.95
SPC42YKL042W SRP102P36057 244 aaPredicted RBP2.84□□□□□ -1.95
SPC42YKL042W YEL073CP39974 107 aa2.84□□□□□ -1.95
SPC42YKL042W NSE4P43124 402 aa2.84□□□□□ -1.95
SPC42YKL042W UPS3Q04006 179 aa2.84□□□□□ -1.95
SPC42YKL042W ATG41Q12048 136 aa2.84□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms