RNA–Protein interactions for RNA: YJL178C

ATG27, Transcript of Type I membrane protein involved in autophagy and the Cvt pathway, yeastyeast

Gene ATG27, Length 816 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG27YJL178C ASP1P38986 381 aaPredicted RBP2.44□□□□□ -2.02
ATG27YJL178C FLX1P40464 311 aa2.44□□□□□ -2.02
ATG27YJL178C MOB2P43563 287 aa2.44□□□□□ -2.02
ATG27YJL178C LSM1P47017 172 aaKnown RBP2.44□□□□□ -2.02
ATG27YJL178C MCM22P47167 239 aa2.44□□□□□ -2.02
ATG27YJL178C PNC1P53184 216 aaKnown RBP2.44□□□□□ -2.02
ATG27YJL178C VPS28Q02767 242 aa2.44□□□□□ -2.02
ATG27YJL178C YDR114CQ04597 100 aa2.44□□□□□ -2.02
ATG27YJL178C NOC4Q06512 552 aaPredicted RBP2.44□□□□□ -2.02
ATG27YJL178C SCP1Q08873 200 aa2.44□□□□□ -2.02
ATG27YJL178C MPD1Q12404 318 aaKnown RBP2.44□□□□□ -2.02
ATG27YJL178C YLR146W-AQ2V2P1 62 aa2.44□□□□□ -2.02
ATG27YJL178C COA2Q3E823 68 aa2.44□□□□□ -2.02
ATG27YJL178C Q0144Q9ZZW2 109 aa2.44□□□□□ -2.02
ATG27YJL178C SEN1Q00416 2231 aaKnown RBP2.44□□□□□ -2.02
ATG27YJL178C QCR2P07257 368 aa2.43□□□□□ -2.02
ATG27YJL178C IFM1P25038 676 aa2.43□□□□□ -2.02
ATG27YJL178C YCR025CP25352 136 aa2.43□□□□□ -2.02
ATG27YJL178C PEX4P29340 183 aa2.43□□□□□ -2.02
ATG27YJL178C ERG2P32352 222 aa2.43□□□□□ -2.02
ATG27YJL178C YPC1P38298 316 aa2.43□□□□□ -2.02
ATG27YJL178C YEA6P39953 335 aa2.43□□□□□ -2.02
ATG27YJL178C YER084WP40057 128 aa2.43□□□□□ -2.02
ATG27YJL178C YCH1P42937 148 aa2.43□□□□□ -2.02
ATG27YJL178C HAM1P47119 197 aaKnown RBP2.43□□□□□ -2.02
ATG27YJL178C FMP41P53889 259 aaKnown RBP2.43□□□□□ -2.02
ATG27YJL178C YPL077CQ02831 240 aa2.43□□□□□ -2.02
ATG27YJL178C SNO1Q03144 224 aa2.43□□□□□ -2.02
ATG27YJL178C YMR279CQ03263 540 aa2.43□□□□□ -2.02
ATG27YJL178C MRX9Q07349 420 aaKnown RBP2.43□□□□□ -2.02
ATG27YJL178C YOR186WQ08560 144 aa2.43□□□□□ -2.02
ATG27YJL178C YDL180WQ12301 547 aa2.43□□□□□ -2.02
ATG27YJL178C PRM4Q12498 284 aa2.43□□□□□ -2.02
ATG27YJL178C HUG1Q6Q5K6 68 aa2.43□□□□□ -2.02
ATG27YJL178C YOR032W-AQ8TGS1 66 aa2.43□□□□□ -2.02
ATG27YJL178C YHR213W-AQ8TGT4 77 aa2.43□□□□□ -2.02
ATG27YJL178C IRA2P19158 3079 aa2.42□□□□□ -2.02
ATG27YJL178C TDH3P00359 332 aaKnown RBP RIP-Chip data2.42□□□□□ -2.02not detected
ATG27YJL178C UBI4P0CG63 381 aaKnown RBP2.42□□□□□ -2.02
ATG27YJL178C RPL40AP0CH08 128 aaKnown RBP2.42□□□□□ -2.02
ATG27YJL178C RPL40BP0CH09 128 aaKnown RBP2.42□□□□□ -2.02
ATG27YJL178C RFA3P26755 122 aaKnown RBP2.42□□□□□ -2.02
ATG27YJL178C IMP1P28627 190 aa2.42□□□□□ -2.02
ATG27YJL178C HMX1P32339 317 aa2.42□□□□□ -2.02
ATG27YJL178C MCH2P36032 473 aa2.42□□□□□ -2.02
ATG27YJL178C ECM31P38122 312 aa2.42□□□□□ -2.02
ATG27YJL178C POP2P39008 433 aa2.42□□□□□ -2.02
ATG27YJL178C RRT13P40042 185 aa2.42□□□□□ -2.02
ATG27YJL178C EMC5P40540 141 aa2.42□□□□□ -2.02
ATG27YJL178C YJR012CP47087 207 aa2.42□□□□□ -2.02
ATG27YJL178C SLX9P53251 210 aaPredicted RBP2.42□□□□□ -2.02
ATG27YJL178C GIM3P53900 129 aa2.42□□□□□ -2.02
ATG27YJL178C SUR7P54003 302 aa2.42□□□□□ -2.02
ATG27YJL178C ACT1P60010 375 aaKnown RBP2.42□□□□□ -2.02
ATG27YJL178C DIG2Q03373 323 aaKnown RBP2.42□□□□□ -2.02
ATG27YJL178C FIT3Q08907 204 aa2.42□□□□□ -2.02
ATG27YJL178C YOR015WQ12169 119 aa2.42□□□□□ -2.02
ATG27YJL178C YCT1Q12235 531 aa2.42□□□□□ -2.02
ATG27YJL178C MED4Q12343 284 aa2.42□□□□□ -2.02
ATG27YJL178C ATG5Q12380 294 aa2.42□□□□□ -2.02
ATG27YJL178C YPR145C-AQ2V2P0 78 aa2.42□□□□□ -2.02
ATG27YJL178C YPR108W-AQ3E7B3 70 aa2.42□□□□□ -2.02
ATG27YJL178C PCC1Q3E833 88 aa2.42□□□□□ -2.02
ATG27YJL178C YLR365WQ7LIF2 110 aa2.42□□□□□ -2.02
ATG27YJL178C YOL085CQ99345 113 aa2.42□□□□□ -2.02
ATG27YJL178C RPL25P04456 142 aaKnown RBP2.41□□□□□ -2.02
ATG27YJL178C SSA3P09435 649 aaKnown RBP2.41□□□□□ -2.02
ATG27YJL178C SRB6P32570 121 aa2.41□□□□□ -2.02
ATG27YJL178C MRPL39P36533 70 aa2.41□□□□□ -2.02
ATG27YJL178C CUE1P38428 203 aa2.41□□□□□ -2.02
ATG27YJL178C SWM2P40342 146 aa2.41□□□□□ -2.02
ATG27YJL178C YFL051CP43552 160 aa2.41□□□□□ -2.02
ATG27YJL178C GNA1P43577 159 aaPredicted RBP2.41□□□□□ -2.02
ATG27YJL178C YJR056CP47115 236 aa2.41□□□□□ -2.02
ATG27YJL178C RCE1Q03530 315 aa2.41□□□□□ -2.02
ATG27YJL178C YMR082CQ04276 118 aa2.41□□□□□ -2.02
ATG27YJL178C API2Q04413 109 aa2.41□□□□□ -2.02
ATG27YJL178C RAF1Q06891 181 aa2.41□□□□□ -2.02
ATG27YJL178C RFU1Q08003 200 aa2.41□□□□□ -2.02
ATG27YJL178C YOR029WQ12243 111 aa2.41□□□□□ -2.02
ATG27YJL178C COX19Q3E731 98 aa2.41□□□□□ -2.02
ATG27YJL178C IRA1P18963 3092 aa2.41□□□□□ -2.02
ATG27YJL178C YKL162CP36052 402 aa2.4□□□□□ -2.03
ATG27YJL178C NSE4P43124 402 aa2.4□□□□□ -2.03
ATG27YJL178C XPT1P47165 209 aa2.4□□□□□ -2.03
ATG27YJL178C SOL1P50278 321 aa2.4□□□□□ -2.03
ATG27YJL178C YGR026WP53217 278 aa2.4□□□□□ -2.03
ATG27YJL178C YCL001W-AP87012 153 aa2.4□□□□□ -2.03
ATG27YJL178C YDR391CQ04170 232 aa2.4□□□□□ -2.03
ATG27YJL178C GMC1Q04399 608 aa2.4□□□□□ -2.03
ATG27YJL178C FIT1Q04433 528 aa2.4□□□□□ -2.03
ATG27YJL178C YMR253CQ04835 414 aa2.4□□□□□ -2.03
ATG27YJL178C YDR286CQ05530 114 aa2.4□□□□□ -2.03
ATG27YJL178C SDO1Q07953 250 aaKnown RBP2.4□□□□□ -2.03
ATG27YJL178C RRS1Q08746 203 aaKnown RBP2.4□□□□□ -2.03
ATG27YJL178C FCF2Q12035 217 aaPredicted RBP2.4□□□□□ -2.03
ATG27YJL178C USB1Q12208 290 aaKnown RBP2.4□□□□□ -2.03
ATG27YJL178C PRM7Q12459 698 aa2.4□□□□□ -2.03
ATG27YJL178C TDH1P00360 332 aaKnown RBP2.39□□□□□ -2.03
ATG27YJL178C NTF2P33331 125 aaKnown RBP2.39□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 15.2 ms