RNA–Protein interactions for RNA: YIL008W

URM1, Transcript of Ubiquitin-like protein involved in thiolation of cytoplasmic tRNAs, yeastyeast

Gene URM1, Length 300 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
URM1YIL008W MDM35O60200 86 aa0.63□□□□□ -2.31
URM1YIL008W SHE2P36068 246 aaKnown RBP RIP-Chip data0.63□□□□□ -2.31not detected
URM1YIL008W CYC2P38909 366 aa0.63□□□□□ -2.31
URM1YIL008W PRE6P40303 254 aaKnown RBP0.63□□□□□ -2.31
URM1YIL008W YIL086CP40503 102 aa0.63□□□□□ -2.31
URM1YIL008W CUP9P41817 306 aa0.63□□□□□ -2.31
URM1YIL008W BLM10P43583 2143 aa0.63□□□□□ -2.31
URM1YIL008W LIA1P47120 325 aaKnown RBP0.63□□□□□ -2.31
URM1YIL008W HOP2P53187 214 aa0.63□□□□□ -2.31
URM1YIL008W FYV6P53913 173 aa0.63□□□□□ -2.31
URM1YIL008W SWC7Q06707 132 aa0.63□□□□□ -2.31
URM1YIL008W MCP1Q12106 302 aa0.63□□□□□ -2.31
URM1YIL008W BPH1P25356 2167 aa0.63□□□□□ -2.31
URM1YIL008W YLR236CA0A023PZG4 107 aa0.62□□□□□ -2.31
URM1YIL008W CDC28P00546 298 aaKnown RBP0.62□□□□□ -2.31
URM1YIL008W DBF2P22204 572 aa0.62□□□□□ -2.31
URM1YIL008W SEC17P32602 292 aa0.62□□□□□ -2.31
URM1YIL008W UBC6P33296 250 aaPredicted RBP0.62□□□□□ -2.31
URM1YIL008W YEL073CP39974 107 aa0.62□□□□□ -2.31
URM1YIL008W YEL028WP39989 153 aa0.62□□□□□ -2.31
URM1YIL008W SOK1P40317 901 aa0.62□□□□□ -2.31
URM1YIL008W HUA1P40325 198 aa0.62□□□□□ -2.31
URM1YIL008W FLX1P40464 311 aa0.62□□□□□ -2.31
URM1YIL008W FAR7P43592 221 aa0.62□□□□□ -2.31
URM1YIL008W YLR283WQ05867 314 aa0.62□□□□□ -2.31
URM1YIL008W GRX8Q05926 109 aa0.62□□□□□ -2.31
URM1YIL008W LDB18Q07887 179 aa0.62□□□□□ -2.31
URM1YIL008W MDM32Q12171 622 aa0.62□□□□□ -2.31
URM1YIL008W OCA6Q12454 224 aa0.62□□□□□ -2.31
URM1YIL008W SEY1Q99287 776 aa0.62□□□□□ -2.31
URM1YIL008W CDC33P07260 213 aaKnown RBP0.61□□□□□ -2.31
URM1YIL008W SEC11P15367 167 aa0.61□□□□□ -2.31
URM1YIL008W SSO1P32867 290 aa0.61□□□□□ -2.31
URM1YIL008W PRP18P33411 251 aaPredicted RBP0.61□□□□□ -2.31
URM1YIL008W YBR285WP38354 144 aa0.61□□□□□ -2.31
URM1YIL008W GIM4P40005 111 aaKnown RBP0.61□□□□□ -2.31
URM1YIL008W YAE1P47118 141 aaPredicted RBP0.61□□□□□ -2.31
URM1YIL008W BRR6P53062 197 aa0.61□□□□□ -2.31
URM1YIL008W ARO8P53090 500 aaKnown RBP0.61□□□□□ -2.31
URM1YIL008W TIM13P53299 105 aa0.61□□□□□ -2.31
URM1YIL008W RCE1Q03530 315 aa0.61□□□□□ -2.31
URM1YIL008W CUE4Q04201 117 aaPredicted RBP0.61□□□□□ -2.31
URM1YIL008W RNH1Q04740 348 aa0.61□□□□□ -2.31
URM1YIL008W CDC123Q05791 360 aa0.61□□□□□ -2.31
URM1YIL008W YHR007C-AQ07074 71 aa0.61□□□□□ -2.31
URM1YIL008W GTT2Q12390 233 aa0.61□□□□□ -2.31
URM1YIL008W EFG1Q3E705 233 aaKnown RBP0.61□□□□□ -2.31
URM1YIL008W Q0297Q9ZZV8 51 aa0.61□□□□□ -2.31
URM1YIL008W STT4P37297 1900 aa0.61□□□□□ -2.31
URM1YIL008W UBR1P19812 1950 aa0.6□□□□□ -2.31
URM1YIL008W CCW14O13547 238 aa0.6□□□□□ -2.31
URM1YIL008W CDC36P06100 191 aaPredicted RBP0.6□□□□□ -2.31
URM1YIL008W SIR2P06700 562 aa0.6□□□□□ -2.31
URM1YIL008W YCR016WP25617 290 aaKnown RBP0.6□□□□□ -2.31
URM1YIL008W TCA17P32613 152 aa0.6□□□□□ -2.31
URM1YIL008W MGM101P32787 269 aaKnown RBP0.6□□□□□ -2.31
URM1YIL008W PRX1P34227 261 aaKnown RBP0.6□□□□□ -2.31
URM1YIL008W YKL102CP34249 101 aa0.6□□□□□ -2.31
URM1YIL008W RPS27AP35997 82 aaKnown RBP0.6□□□□□ -2.31
URM1YIL008W UTP30P36144 274 aaKnown RBP0.6□□□□□ -2.31
URM1YIL008W RPS27BP38711 82 aa0.6□□□□□ -2.31
URM1YIL008W YHL042WP38729 150 aa0.6□□□□□ -2.31
URM1YIL008W VMA22P38784 181 aa0.6□□□□□ -2.31
URM1YIL008W AIM18P38884 321 aa0.6□□□□□ -2.31
URM1YIL008W YFL065CP43539 102 aa0.6□□□□□ -2.31
URM1YIL008W BXI1P48558 297 aa0.6□□□□□ -2.31
URM1YIL008W MIC26P50087 233 aa0.6□□□□□ -2.31
URM1YIL008W YNL247WP53852 767 aaKnown RBP0.6□□□□□ -2.31
URM1YIL008W LAP3Q01532 483 aaKnown RBP RIP-Chip data0.6□□□□□ -2.31not detected
URM1YIL008W PET117Q02771 107 aa0.6□□□□□ -2.31
URM1YIL008W RAD28Q12021 506 aa0.6□□□□□ -2.31
URM1YIL008W YOR032W-AQ8TGS1 66 aa0.6□□□□□ -2.31
URM1YIL008W RPL22AP05749 121 aaKnown RBP0.59□□□□□ -2.31
URM1YIL008W YFR010W-AP0C5N0 62 aa0.59□□□□□ -2.31
URM1YIL008W MATALPHA1P0CY06 175 aa0.59□□□□□ -2.31
URM1YIL008W HMLALPHA1P0CY07 175 aa0.59□□□□□ -2.31
URM1YIL008W TAH1P25638 111 aaPredicted RBP0.59□□□□□ -2.31
URM1YIL008W APS1P35181 156 aa0.59□□□□□ -2.31
URM1YIL008W YKT6P36015 200 aaKnown RBP0.59□□□□□ -2.31
URM1YIL008W MAK5P38112 773 aaPredicted RBP0.59□□□□□ -2.31
URM1YIL008W PRS3P38689 320 aaKnown RBP0.59□□□□□ -2.31
URM1YIL008W COX15P40086 486 aa0.59□□□□□ -2.31
URM1YIL008W RAD17P48581 401 aa0.59□□□□□ -2.31
URM1YIL008W CWC27Q02770 301 aa0.59□□□□□ -2.31
URM1YIL008W Q0144Q9ZZW2 109 aa0.59□□□□□ -2.31
URM1YIL008W YHR212W-AP0CX91 67 aa0.58□□□□□ -2.32
URM1YIL008W YHR214C-DP0CX93 97 aa0.58□□□□□ -2.32
URM1YIL008W URA5P13298 226 aaKnown RBP0.58□□□□□ -2.32
URM1YIL008W KSS1P14681 368 aa0.58□□□□□ -2.32
URM1YIL008W STP22P25604 385 aa0.58□□□□□ -2.32
URM1YIL008W YCR099CP25657 155 aa0.58□□□□□ -2.32
URM1YIL008W ADE1P27616 306 aa0.58□□□□□ -2.32
URM1YIL008W IDH1P28834 360 aaKnown RBP RIP-Chip data0.58□□□□□ -2.32not detected
URM1YIL008W SUI1P32911 108 aaKnown RBP0.58□□□□□ -2.32
URM1YIL008W YHL037CP38733 133 aa0.58□□□□□ -2.32
URM1YIL008W APQ12P40532 138 aa0.58□□□□□ -2.32
URM1YIL008W APS3P47064 194 aa0.58□□□□□ -2.32
URM1YIL008W ALG13P53178 202 aa0.58□□□□□ -2.32
URM1YIL008W LSM3P57743 89 aaKnown RBP0.58□□□□□ -2.32
URM1YIL008W YDR274CP87283 123 aa0.58□□□□□ -2.32
Retrieved 100 of 5,963 RNA–protein pairs in 618.2 ms