RNA–Protein interactions for RNA: YIL008W

URM1, Transcript of Ubiquitin-like protein involved in thiolation of cytoplasmic tRNAs, yeast

Gene URM1, Length 300 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
URM1	YIL008W	MDM35	O60200	86 aa		0.63	□□□□□ -2.31
URM1	YIL008W	SHE2	P36068	246 aa	Known RBP RIP-Chip data	0.63	□□□□□ -2.31	not detected
URM1	YIL008W	CYC2	P38909	366 aa		0.63	□□□□□ -2.31
URM1	YIL008W	PRE6	P40303	254 aa	Known RBP	0.63	□□□□□ -2.31
URM1	YIL008W	YIL086C	P40503	102 aa		0.63	□□□□□ -2.31
URM1	YIL008W	CUP9	P41817	306 aa		0.63	□□□□□ -2.31
URM1	YIL008W	BLM10	P43583	2143 aa		0.63	□□□□□ -2.31
URM1	YIL008W	LIA1	P47120	325 aa	Known RBP	0.63	□□□□□ -2.31
URM1	YIL008W	HOP2	P53187	214 aa		0.63	□□□□□ -2.31
URM1	YIL008W	FYV6	P53913	173 aa		0.63	□□□□□ -2.31
URM1	YIL008W	SWC7	Q06707	132 aa		0.63	□□□□□ -2.31
URM1	YIL008W	MCP1	Q12106	302 aa		0.63	□□□□□ -2.31
URM1	YIL008W	BPH1	P25356	2167 aa		0.63	□□□□□ -2.31
URM1	YIL008W	YLR236C	A0A023PZG4	107 aa		0.62	□□□□□ -2.31
URM1	YIL008W	CDC28	P00546	298 aa	Known RBP	0.62	□□□□□ -2.31
URM1	YIL008W	DBF2	P22204	572 aa		0.62	□□□□□ -2.31
URM1	YIL008W	SEC17	P32602	292 aa		0.62	□□□□□ -2.31
URM1	YIL008W	UBC6	P33296	250 aa	Predicted RBP	0.62	□□□□□ -2.31
URM1	YIL008W	YEL073C	P39974	107 aa		0.62	□□□□□ -2.31
URM1	YIL008W	YEL028W	P39989	153 aa		0.62	□□□□□ -2.31
URM1	YIL008W	SOK1	P40317	901 aa		0.62	□□□□□ -2.31
URM1	YIL008W	HUA1	P40325	198 aa		0.62	□□□□□ -2.31
URM1	YIL008W	FLX1	P40464	311 aa		0.62	□□□□□ -2.31
URM1	YIL008W	FAR7	P43592	221 aa		0.62	□□□□□ -2.31
URM1	YIL008W	YLR283W	Q05867	314 aa		0.62	□□□□□ -2.31
URM1	YIL008W	GRX8	Q05926	109 aa		0.62	□□□□□ -2.31
URM1	YIL008W	LDB18	Q07887	179 aa		0.62	□□□□□ -2.31
URM1	YIL008W	MDM32	Q12171	622 aa		0.62	□□□□□ -2.31
URM1	YIL008W	OCA6	Q12454	224 aa		0.62	□□□□□ -2.31
URM1	YIL008W	SEY1	Q99287	776 aa		0.62	□□□□□ -2.31
URM1	YIL008W	CDC33	P07260	213 aa	Known RBP	0.61	□□□□□ -2.31
URM1	YIL008W	SEC11	P15367	167 aa		0.61	□□□□□ -2.31
URM1	YIL008W	SSO1	P32867	290 aa		0.61	□□□□□ -2.31
URM1	YIL008W	PRP18	P33411	251 aa	Predicted RBP	0.61	□□□□□ -2.31
URM1	YIL008W	YBR285W	P38354	144 aa		0.61	□□□□□ -2.31
URM1	YIL008W	GIM4	P40005	111 aa	Known RBP	0.61	□□□□□ -2.31
URM1	YIL008W	YAE1	P47118	141 aa	Predicted RBP	0.61	□□□□□ -2.31
URM1	YIL008W	BRR6	P53062	197 aa		0.61	□□□□□ -2.31
URM1	YIL008W	ARO8	P53090	500 aa	Known RBP	0.61	□□□□□ -2.31
URM1	YIL008W	TIM13	P53299	105 aa		0.61	□□□□□ -2.31
URM1	YIL008W	RCE1	Q03530	315 aa		0.61	□□□□□ -2.31
URM1	YIL008W	CUE4	Q04201	117 aa	Predicted RBP	0.61	□□□□□ -2.31
URM1	YIL008W	RNH1	Q04740	348 aa		0.61	□□□□□ -2.31
URM1	YIL008W	CDC123	Q05791	360 aa		0.61	□□□□□ -2.31
URM1	YIL008W	YHR007C-A	Q07074	71 aa		0.61	□□□□□ -2.31
URM1	YIL008W	GTT2	Q12390	233 aa		0.61	□□□□□ -2.31
URM1	YIL008W	EFG1	Q3E705	233 aa	Known RBP	0.61	□□□□□ -2.31
URM1	YIL008W	Q0297	Q9ZZV8	51 aa		0.61	□□□□□ -2.31
URM1	YIL008W	STT4	P37297	1900 aa		0.61	□□□□□ -2.31
URM1	YIL008W	UBR1	P19812	1950 aa		0.6	□□□□□ -2.31
URM1	YIL008W	CCW14	O13547	238 aa		0.6	□□□□□ -2.31
URM1	YIL008W	CDC36	P06100	191 aa	Predicted RBP	0.6	□□□□□ -2.31
URM1	YIL008W	SIR2	P06700	562 aa		0.6	□□□□□ -2.31
URM1	YIL008W	YCR016W	P25617	290 aa	Known RBP	0.6	□□□□□ -2.31
URM1	YIL008W	TCA17	P32613	152 aa		0.6	□□□□□ -2.31
URM1	YIL008W	MGM101	P32787	269 aa	Known RBP	0.6	□□□□□ -2.31
URM1	YIL008W	PRX1	P34227	261 aa	Known RBP	0.6	□□□□□ -2.31
URM1	YIL008W	YKL102C	P34249	101 aa		0.6	□□□□□ -2.31
URM1	YIL008W	RPS27A	P35997	82 aa	Known RBP	0.6	□□□□□ -2.31
URM1	YIL008W	UTP30	P36144	274 aa	Known RBP	0.6	□□□□□ -2.31
URM1	YIL008W	RPS27B	P38711	82 aa		0.6	□□□□□ -2.31
URM1	YIL008W	YHL042W	P38729	150 aa		0.6	□□□□□ -2.31
URM1	YIL008W	VMA22	P38784	181 aa		0.6	□□□□□ -2.31
URM1	YIL008W	AIM18	P38884	321 aa		0.6	□□□□□ -2.31
URM1	YIL008W	YFL065C	P43539	102 aa		0.6	□□□□□ -2.31
URM1	YIL008W	BXI1	P48558	297 aa		0.6	□□□□□ -2.31
URM1	YIL008W	MIC26	P50087	233 aa		0.6	□□□□□ -2.31
URM1	YIL008W	YNL247W	P53852	767 aa	Known RBP	0.6	□□□□□ -2.31
URM1	YIL008W	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	0.6	□□□□□ -2.31	not detected
URM1	YIL008W	PET117	Q02771	107 aa		0.6	□□□□□ -2.31
URM1	YIL008W	RAD28	Q12021	506 aa		0.6	□□□□□ -2.31
URM1	YIL008W	YOR032W-A	Q8TGS1	66 aa		0.6	□□□□□ -2.31
URM1	YIL008W	RPL22A	P05749	121 aa	Known RBP	0.59	□□□□□ -2.31
URM1	YIL008W	YFR010W-A	P0C5N0	62 aa		0.59	□□□□□ -2.31
URM1	YIL008W	MATALPHA1	P0CY06	175 aa		0.59	□□□□□ -2.31
URM1	YIL008W	HMLALPHA1	P0CY07	175 aa		0.59	□□□□□ -2.31
URM1	YIL008W	TAH1	P25638	111 aa	Predicted RBP	0.59	□□□□□ -2.31
URM1	YIL008W	APS1	P35181	156 aa		0.59	□□□□□ -2.31
URM1	YIL008W	YKT6	P36015	200 aa	Known RBP	0.59	□□□□□ -2.31
URM1	YIL008W	MAK5	P38112	773 aa	Predicted RBP	0.59	□□□□□ -2.31
URM1	YIL008W	PRS3	P38689	320 aa	Known RBP	0.59	□□□□□ -2.31
URM1	YIL008W	COX15	P40086	486 aa		0.59	□□□□□ -2.31
URM1	YIL008W	RAD17	P48581	401 aa		0.59	□□□□□ -2.31
URM1	YIL008W	CWC27	Q02770	301 aa		0.59	□□□□□ -2.31
URM1	YIL008W	Q0144	Q9ZZW2	109 aa		0.59	□□□□□ -2.31
URM1	YIL008W	YHR212W-A	P0CX91	67 aa		0.58	□□□□□ -2.32
URM1	YIL008W	YHR214C-D	P0CX93	97 aa		0.58	□□□□□ -2.32
URM1	YIL008W	URA5	P13298	226 aa	Known RBP	0.58	□□□□□ -2.32
URM1	YIL008W	KSS1	P14681	368 aa		0.58	□□□□□ -2.32
URM1	YIL008W	STP22	P25604	385 aa		0.58	□□□□□ -2.32
URM1	YIL008W	YCR099C	P25657	155 aa		0.58	□□□□□ -2.32
URM1	YIL008W	ADE1	P27616	306 aa		0.58	□□□□□ -2.32
URM1	YIL008W	IDH1	P28834	360 aa	Known RBP RIP-Chip data	0.58	□□□□□ -2.32	not detected
URM1	YIL008W	SUI1	P32911	108 aa	Known RBP	0.58	□□□□□ -2.32
URM1	YIL008W	YHL037C	P38733	133 aa		0.58	□□□□□ -2.32
URM1	YIL008W	APQ12	P40532	138 aa		0.58	□□□□□ -2.32
URM1	YIL008W	APS3	P47064	194 aa		0.58	□□□□□ -2.32
URM1	YIL008W	ALG13	P53178	202 aa		0.58	□□□□□ -2.32
URM1	YIL008W	LSM3	P57743	89 aa	Known RBP	0.58	□□□□□ -2.32
URM1	YIL008W	YDR274C	P87283	123 aa		0.58	□□□□□ -2.32

Retrieved 100 of 5,963 RNA–protein pairs in 24.2 ms