RNA–Protein interactions for RNA: YGR271C-A

EFG1, Essential protein required for maturation of 18S rRNA, yeastyeast

Gene EFG1, Length 702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
EFG1YGR271C-A TIR1P10863 254 aa2.28□□□□□ -2.04
EFG1YGR271C-A UGX2P32772 223 aa2.28□□□□□ -2.04
EFG1YGR271C-A UTP11P34247 250 aaPredicted RBP2.28□□□□□ -2.04
EFG1YGR271C-A PTC1P35182 281 aa2.28□□□□□ -2.04
EFG1YGR271C-A YER188WP40103 239 aa2.28□□□□□ -2.04
EFG1YGR271C-A YNL200CP40165 246 aaKnown RBP2.28□□□□□ -2.04
EFG1YGR271C-A PGD1P40356 397 aa2.28□□□□□ -2.04
EFG1YGR271C-A AYR1P40471 297 aa2.28□□□□□ -2.04
EFG1YGR271C-A YGR219WP53307 113 aa2.28□□□□□ -2.04
EFG1YGR271C-A VPS71Q03433 280 aa2.28□□□□□ -2.04
EFG1YGR271C-A FCF1Q05498 189 aaPredicted RBP2.28□□□□□ -2.04
EFG1YGR271C-A FCY1Q12178 158 aa2.28□□□□□ -2.04
EFG1YGR271C-A YOR214CQ12282 236 aa2.28□□□□□ -2.04
EFG1YGR271C-A IES3Q12345 250 aa2.28□□□□□ -2.04
EFG1YGR271C-A ODC2Q99297 307 aa2.28□□□□□ -2.04
EFG1YGR271C-A YIL177CP40434 1758 aa2.28□□□□□ -2.04
EFG1YGR271C-A YJL225CP40889 1758 aa2.28□□□□□ -2.04
EFG1YGR271C-A SNT2P53127 1403 aa2.27□□□□□ -2.05
EFG1YGR271C-A FMP49A0A023PZB3 126 aa2.27□□□□□ -2.05
EFG1YGR271C-A YAR023CD6VPM8 179 aa2.27□□□□□ -2.05
EFG1YGR271C-A RAD10P06838 210 aa2.27□□□□□ -2.05
EFG1YGR271C-A SRP21P32342 167 aa2.27□□□□□ -2.05
EFG1YGR271C-A MRPL17P36528 281 aa2.27□□□□□ -2.05
EFG1YGR271C-A RGI1P40043 161 aaPredicted RBP2.27□□□□□ -2.05
EFG1YGR271C-A VTC1P40046 129 aaRIP-Chip data2.27□□□□□ -2.05not detected
EFG1YGR271C-A GPI2P46961 280 aa2.27□□□□□ -2.05
EFG1YGR271C-A YGR017WP53210 297 aa2.27□□□□□ -2.05
EFG1YGR271C-A YGR026WP53217 278 aa2.27□□□□□ -2.05
EFG1YGR271C-A YMR099CQ03161 297 aaKnown RBP2.27□□□□□ -2.05
EFG1YGR271C-A SPC3Q12133 184 aa2.27□□□□□ -2.05
EFG1YGR271C-A SHB17P36136 271 aaKnown RBP2.26□□□□□ -2.05
EFG1YGR271C-A FYV4P38783 130 aaPredicted RBP2.26□□□□□ -2.05
EFG1YGR271C-A GVP36P40531 326 aaKnown RBP2.26□□□□□ -2.05
EFG1YGR271C-A ECO1P43605 281 aa2.26□□□□□ -2.05
EFG1YGR271C-A YFR045WP43617 309 aa2.26□□□□□ -2.05
EFG1YGR271C-A AIF1P52923 378 aa2.26□□□□□ -2.05
EFG1YGR271C-A YGL193CP53097 103 aa2.26□□□□□ -2.05
EFG1YGR271C-A YDR274CP87283 123 aa2.26□□□□□ -2.05
EFG1YGR271C-A YDR391CQ04170 232 aa2.26□□□□□ -2.05
EFG1YGR271C-A LDB18Q07887 179 aa2.26□□□□□ -2.05
EFG1YGR271C-A YPL225WQ08971 146 aaKnown RBP2.26□□□□□ -2.05
EFG1YGR271C-A FYV7Q12247 151 aa2.26□□□□□ -2.05
EFG1YGR271C-A YLR099W-AQ3E798 87 aa2.26□□□□□ -2.05
EFG1YGR271C-A NMT1P14743 455 aa2.25□□□□□ -2.05
EFG1YGR271C-A NSP1P14907 823 aaKnown RBP2.25□□□□□ -2.05
EFG1YGR271C-A SPT14P32363 452 aa2.25□□□□□ -2.05
EFG1YGR271C-A HYM1P32464 399 aa2.25□□□□□ -2.05
EFG1YGR271C-A GSP1P32835 219 aaKnown RBP2.25□□□□□ -2.05
EFG1YGR271C-A GSP2P32836 220 aaKnown RBP2.25□□□□□ -2.05
EFG1YGR271C-A UMP1P38293 148 aa2.25□□□□□ -2.05
EFG1YGR271C-A YBR220CP38318 560 aa2.25□□□□□ -2.05
EFG1YGR271C-A HTD2P38790 280 aaKnown RBP2.25□□□□□ -2.05
EFG1YGR271C-A NSA2P40078 261 aaKnown RBP2.25□□□□□ -2.05
EFG1YGR271C-A GON7P46984 123 aa2.25□□□□□ -2.05
EFG1YGR271C-A YNL033WP53964 284 aa2.25□□□□□ -2.05
EFG1YGR271C-A YNL019CP53975 284 aa2.25□□□□□ -2.05
EFG1YGR271C-A MRPS8Q03799 155 aa2.25□□□□□ -2.05
EFG1YGR271C-A BOL1Q3E793 110 aa2.25□□□□□ -2.05
EFG1YGR271C-A YNL277W-AQ3E7Z0 62 aa2.25□□□□□ -2.05
EFG1YGR271C-A SAS5Q99314 248 aa2.25□□□□□ -2.05
EFG1YGR271C-A HIS3P06633 220 aa2.24□□□□□ -2.05
EFG1YGR271C-A YHR032W-AP0C5N6 59 aa2.24□□□□□ -2.05
EFG1YGR271C-A PHO13P19881 312 aa2.24□□□□□ -2.05
EFG1YGR271C-A SUI1P32911 108 aaKnown RBP2.24□□□□□ -2.05
EFG1YGR271C-A YRA2P36036 203 aaKnown RBP RIP-Chip data2.24□□□□□ -2.05not detected
EFG1YGR271C-A YHR140WP38842 239 aa2.24□□□□□ -2.05
EFG1YGR271C-A CTR2P38865 189 aa2.24□□□□□ -2.05
EFG1YGR271C-A AIM11P87275 137 aa2.24□□□□□ -2.05
EFG1YGR271C-A YKR005CQ02203 525 aa2.24□□□□□ -2.05
EFG1YGR271C-A VPS28Q02767 242 aa2.24□□□□□ -2.05
EFG1YGR271C-A GAL83Q04739 417 aa2.24□□□□□ -2.05
EFG1YGR271C-A YPR114WQ06107 315 aa2.24□□□□□ -2.05
EFG1YGR271C-A YOR289WQ12012 251 aaPredicted RBP2.24□□□□□ -2.05
EFG1YGR271C-A YLR118CQ12354 227 aa2.24□□□□□ -2.05
EFG1YGR271C-A TOP2P06786 1428 aaKnown RBP2.24□□□□□ -2.05
EFG1YGR271C-A FKS1P38631 1876 aaKnown RBP2.23□□□□□ -2.05
EFG1YGR271C-A MSW1P04803 379 aa2.23□□□□□ -2.05
EFG1YGR271C-A POR1P04840 283 aaKnown RBP2.23□□□□□ -2.05
EFG1YGR271C-A RAD6P06104 172 aa2.23□□□□□ -2.05
EFG1YGR271C-A YCR101CP25607 182 aa2.23□□□□□ -2.05
EFG1YGR271C-A AHT1P29589 182 aa2.23□□□□□ -2.05
EFG1YGR271C-A SNC2P33328 115 aa2.23□□□□□ -2.05
EFG1YGR271C-A LHP1P33399 275 aaKnown RBP2.23□□□□□ -2.05
EFG1YGR271C-A TRS20P38334 175 aa2.23□□□□□ -2.05
EFG1YGR271C-A YHL026CP38740 315 aa2.23□□□□□ -2.05
EFG1YGR271C-A YJL218WP40892 196 aaKnown RBP2.23□□□□□ -2.05
EFG1YGR271C-A SBH1P52870 82 aa2.23□□□□□ -2.05
EFG1YGR271C-A YMR295CQ03559 197 aa2.23□□□□□ -2.05
EFG1YGR271C-A SYM1Q06563 197 aa2.23□□□□□ -2.05
EFG1YGR271C-A YOR268CQ08734 132 aa2.23□□□□□ -2.05
EFG1YGR271C-A ATO3Q12359 275 aa2.23□□□□□ -2.05
EFG1YGR271C-A TRM3Q07527 1436 aa2.23□□□□□ -2.05
EFG1YGR271C-A HSP12P22943 109 aaKnown RBP2.22□□□□□ -2.05
EFG1YGR271C-A RPL14AP36105 138 aaKnown RBP2.22□□□□□ -2.05
EFG1YGR271C-A YKR032WP36127 104 aa2.22□□□□□ -2.05
EFG1YGR271C-A RPL14BP38754 138 aaKnown RBP2.22□□□□□ -2.05
EFG1YGR271C-A SPC25P40014 221 aa2.22□□□□□ -2.05
EFG1YGR271C-A CUP9P41817 306 aa2.22□□□□□ -2.05
EFG1YGR271C-A SMD3P43321 101 aaKnown RBP2.22□□□□□ -2.05
EFG1YGR271C-A SFT1P43682 97 aa2.22□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 221 ms