RNA–Protein interactions for RNA: YGR261C

APL6, Transcript of Beta3-like subunit of the yeast AP-3 complex, yeast

Gene APL6, Length 2,430 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
APL6	YGR261C	YRF1-7	P0CX15	1859 aa		4.14	□□□□□ -1.75
APL6	YGR261C	YRF1-6	P53819	1859 aa		4.14	□□□□□ -1.75
APL6	YGR261C	MAK32	P23060	363 aa		4.14	□□□□□ -1.75
APL6	YGR261C	LSM2	P38203	95 aa	Known RBP	4.14	□□□□□ -1.75
APL6	YGR261C	YBR013C	P38215	129 aa		4.14	□□□□□ -1.75
APL6	YGR261C	GGC1	P38988	300 aa		4.14	□□□□□ -1.75
APL6	YGR261C	NMA2	P53204	395 aa		4.14	□□□□□ -1.75
APL6	YGR261C	YGR151C	P53287	111 aa		4.14	□□□□□ -1.75
APL6	YGR261C	YPL067C	Q02754	198 aa		4.14	□□□□□ -1.75
APL6	YGR261C	TRS23	Q03784	219 aa		4.14	□□□□□ -1.75
APL6	YGR261C	TIR4	Q12218	487 aa	Predicted RBP	4.14	□□□□□ -1.75
APL6	YGR261C	RPL13A	Q12690	199 aa	Predicted RBP	4.14	□□□□□ -1.75
APL6	YGR261C	RPB5	P20434	215 aa		4.14	□□□□□ -1.75
APL6	YGR261C	FMT1	P32785	401 aa		4.14	□□□□□ -1.75
APL6	YGR261C	RPL13B	P40212	199 aa	Known RBP	4.14	□□□□□ -1.75
APL6	YGR261C	NUP100	Q02629	959 aa		4.14	□□□□□ -1.75
APL6	YGR261C	GAS3	Q03655	524 aa		4.14	□□□□□ -1.75
APL6	YGR261C	PST1	Q12355	444 aa		4.14	□□□□□ -1.75
APL6	YGR261C	IPT1	P38954	527 aa		4.13	□□□□□ -1.75
APL6	YGR261C	PTI1	P39927	425 aa	Predicted RBP	4.13	□□□□□ -1.75
APL6	YGR261C	YJL218W	P40892	196 aa	Known RBP	4.13	□□□□□ -1.75
APL6	YGR261C	YJL213W	P40896	331 aa		4.13	□□□□□ -1.75
APL6	YGR261C	EAF6	P47128	113 aa		4.13	□□□□□ -1.75
APL6	YGR261C	GEP7	P53171	287 aa		4.13	□□□□□ -1.75
APL6	YGR261C	AAH1	P53909	347 aa		4.13	□□□□□ -1.75
APL6	YGR261C	RPL15A	P05748	204 aa	Known RBP	4.13	□□□□□ -1.75
APL6	YGR261C	ATP5	P09457	212 aa		4.13	□□□□□ -1.75
APL6	YGR261C	GPX1	P36014	167 aa		4.13	□□□□□ -1.75
APL6	YGR261C	AVT5	P38176	459 aa		4.13	□□□□□ -1.75
APL6	YGR261C	CUP9	P41817	306 aa		4.13	□□□□□ -1.75
APL6	YGR261C	PRY1	P47032	299 aa		4.13	□□□□□ -1.75
APL6	YGR261C	RPL15B	P54780	204 aa	Predicted RBP	4.13	□□□□□ -1.75
APL6	YGR261C	CYC1	P00044	109 aa	Predicted RBP	4.12	□□□□□ -1.75
APL6	YGR261C	NOP1	P15646	327 aa	Known RBP	4.12	□□□□□ -1.75
APL6	YGR261C	YCR006C	P25350	157 aa		4.12	□□□□□ -1.75
APL6	YGR261C	AVT2	P39981	480 aa		4.12	□□□□□ -1.75
APL6	YGR261C	YFR045W	P43617	309 aa		4.12	□□□□□ -1.75
APL6	YGR261C	DAN1	P47178	298 aa		4.12	□□□□□ -1.75
APL6	YGR261C	ERG25	P53045	309 aa		4.12	□□□□□ -1.75
APL6	YGR261C	FMP41	P53889	259 aa	Known RBP	4.12	□□□□□ -1.75
APL6	YGR261C	USV1	Q12132	391 aa		4.12	□□□□□ -1.75
APL6	YGR261C	TAD3	Q9URQ3	322 aa		4.12	□□□□□ -1.75
APL6	YGR261C	BI2	P03873	423 aa		4.12	□□□□□ -1.75
APL6	YGR261C	HMRA1	P0CY11	126 aa		4.12	□□□□□ -1.75
APL6	YGR261C	IRC22	P40006	225 aa		4.12	□□□□□ -1.75
APL6	YGR261C	CCS1	P40202	249 aa	Known RBP	4.12	□□□□□ -1.75
APL6	YGR261C	MPM1	P40364	252 aa		4.12	□□□□□ -1.75
APL6	YGR261C	UPS3	Q04006	179 aa		4.12	□□□□□ -1.75
APL6	YGR261C	GAL83	Q04739	417 aa		4.12	□□□□□ -1.75
APL6	YGR261C	YMR252C	Q04814	134 aa		4.12	□□□□□ -1.75
APL6	YGR261C	KEI1	Q06346	221 aa		4.12	□□□□□ -1.75
APL6	YGR261C	YOR292C	Q08743	309 aa		4.12	□□□□□ -1.75
APL6	YGR261C	YOR097C	Q12274	175 aa	Predicted RBP	4.12	□□□□□ -1.75
APL6	YGR261C	HEM4	P06174	275 aa		4.11	□□□□□ -1.75
APL6	YGR261C	TIM17	P39515	158 aa		4.11	□□□□□ -1.75
APL6	YGR261C	PAM16	P42949	149 aa		4.11	□□□□□ -1.75
APL6	YGR261C	TPC1	P53257	314 aa		4.11	□□□□□ -1.75
APL6	YGR261C	NRD1	P53617	575 aa	Known RBP RIP-Chip data	4.11	□□□□□ -1.75	not detected
APL6	YGR261C	FUN14	P18411	198 aa		4.11	□□□□□ -1.75
APL6	YGR261C	MRS4	P23500	304 aa		4.11	□□□□□ -1.75
APL6	YGR261C	CLB6	P32943	380 aa		4.11	□□□□□ -1.75
APL6	YGR261C	SKI6	P46948	246 aa	Predicted RBP	4.11	□□□□□ -1.75
APL6	YGR261C	GTF1	P53260	183 aa	Predicted RBP	4.11	□□□□□ -1.75
APL6	YGR261C	NRM1	P53718	249 aa		4.11	□□□□□ -1.75
APL6	YGR261C	HTL1	Q9URQ5	78 aa		4.11	□□□□□ -1.75
APL6	YGR261C	CSE2	P33308	149 aa		4.1	□□□□□ -1.75
APL6	YGR261C	CAT5	P41735	233 aa		4.1	□□□□□ -1.75
APL6	YGR261C	YDL211C	Q12121	372 aa		4.1	□□□□□ -1.75
APL6	YGR261C	CCH1	P50077	2039 aa		4.1	□□□□□ -1.75
APL6	YGR261C	DNA2	P38859	1522 aa		4.1	□□□□□ -1.75
APL6	YGR261C	RAD6	P06104	172 aa		4.1	□□□□□ -1.75
APL6	YGR261C	RPB3	P16370	318 aa	Known RBP	4.1	□□□□□ -1.75
APL6	YGR261C	RPL16A	P26784	199 aa	Known RBP	4.1	□□□□□ -1.75
APL6	YGR261C	SHE1	P38200	338 aa		4.1	□□□□□ -1.75
APL6	YGR261C	YER134C	P40081	178 aa		4.1	□□□□□ -1.75
APL6	YGR261C	YNL200C	P40165	246 aa	Known RBP	4.1	□□□□□ -1.75
APL6	YGR261C	TDA4	P47153	279 aa		4.1	□□□□□ -1.75
APL6	YGR261C	RCE1	Q03530	315 aa		4.1	□□□□□ -1.75
APL6	YGR261C	MIM1	Q08176	113 aa		4.1	□□□□□ -1.75
APL6	YGR261C	TIM18	Q08749	192 aa		4.1	□□□□□ -1.75
APL6	YGR261C	YDR029W	Q12111	104 aa		4.1	□□□□□ -1.75
APL6	YGR261C	DDP1	Q99321	188 aa	Known RBP	4.1	□□□□□ -1.75
APL6	YGR261C	YPK9	Q12697	1472 aa		4.09	□□□□□ -1.75
APL6	YGR261C	AHT1	P29589	182 aa		4.09	□□□□□ -1.75
APL6	YGR261C	YET1	P35723	206 aa		4.09	□□□□□ -1.75
APL6	YGR261C	GAT4	P40569	121 aa		4.09	□□□□□ -1.75
APL6	YGR261C	PHS1	P40857	217 aa		4.09	□□□□□ -1.75
APL6	YGR261C	YGL082W	P53155	381 aa		4.09	□□□□□ -1.75
APL6	YGR261C	MED11	Q99278	115 aa		4.09	□□□□□ -1.75
APL6	YGR261C	RKR1	Q04781	1562 aa		4.09	□□□□□ -1.75
APL6	YGR261C	SRB8	P25648	1427 aa		4.09	□□□□□ -1.76
APL6	YGR261C	ATG2	P53855	1592 aa		4.09	□□□□□ -1.76
APL6	YGR261C	RPL23A	P0CX41	137 aa	Known RBP	4.09	□□□□□ -1.76
APL6	YGR261C	RPL23B	P0CX42	137 aa	Known RBP	4.09	□□□□□ -1.76
APL6	YGR261C	HAP3	P13434	144 aa		4.09	□□□□□ -1.76
APL6	YGR261C	SSS1	P35179	80 aa		4.09	□□□□□ -1.76
APL6	YGR261C	YIL012W	P40551	113 aa		4.09	□□□□□ -1.76
APL6	YGR261C	YPR174C	Q06616	221 aa	Predicted RBP	4.09	□□□□□ -1.76
APL6	YGR261C	HRT1	Q08273	121 aa		4.09	□□□□□ -1.76
APL6	YGR261C	YCR024C-B	Q3E7Z8	88 aa		4.09	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 48.9 ms