RNA–Protein interactions for RNA: YGR195W

SKI6, Transcript of Exosome non-catalytic core component, yeast

Gene SKI6, Length 741 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SKI6	YGR195W	YCL021W-A	Q96VH3	125 aa		4.11	□□□□□ -1.75
SKI6	YGR195W	ROM2	P51862	1356 aa	Known RBP	4.11	□□□□□ -1.75
SKI6	YGR195W	Q0255	P03881	472 aa		4.1	□□□□□ -1.75
SKI6	YGR195W	BET1	P22804	142 aa		4.1	□□□□□ -1.75
SKI6	YGR195W	RPS1B	P23248	255 aa	Known RBP	4.1	□□□□□ -1.75
SKI6	YGR195W	GSP1	P32835	219 aa	Known RBP	4.1	□□□□□ -1.75
SKI6	YGR195W	GSP2	P32836	220 aa	Known RBP	4.1	□□□□□ -1.75
SKI6	YGR195W	PAN3	P36102	679 aa	Predicted RBP	4.1	□□□□□ -1.75
SKI6	YGR195W	BAT1	P38891	393 aa	Known RBP	4.1	□□□□□ -1.75
SKI6	YGR195W	ASP1	P38986	381 aa	Predicted RBP	4.1	□□□□□ -1.75
SKI6	YGR195W	YAR068W	P39564	161 aa		4.1	□□□□□ -1.75
SKI6	YGR195W	IGD1	P43598	195 aa		4.1	□□□□□ -1.75
SKI6	YGR195W	YFR054C	P43622	192 aa		4.1	□□□□□ -1.75
SKI6	YGR195W	SKI6	P46948	246 aa	Predicted RBP	4.1	□□□□□ -1.75
SKI6	YGR195W	TDA4	P47153	279 aa		4.1	□□□□□ -1.75
SKI6	YGR195W	ORM1	P53224	222 aa		4.1	□□□□□ -1.75
SKI6	YGR195W	YPL039W	Q03080	316 aa		4.1	□□□□□ -1.75
SKI6	YGR195W	RUB1	Q03919	77 aa		4.1	□□□□□ -1.75
SKI6	YGR195W	SCW10	Q04951	389 aa		4.1	□□□□□ -1.75
SKI6	YGR195W	PPT2	Q12036	173 aa		4.1	□□□□□ -1.75
SKI6	YGR195W	DAS2	Q12084	232 aa		4.1	□□□□□ -1.75
SKI6	YGR195W	FCY1	Q12178	158 aa		4.1	□□□□□ -1.75
SKI6	YGR195W	ATG5	Q12380	294 aa		4.1	□□□□□ -1.75
SKI6	YGR195W	RPS19A	P07280	144 aa	Known RBP	4.09	□□□□□ -1.75
SKI6	YGR195W	RPS19B	P07281	144 aa	Predicted RBP	4.09	□□□□□ -1.75
SKI6	YGR195W	CCA1	P21269	546 aa		4.09	□□□□□ -1.75
SKI6	YGR195W	LDB16	P25587	256 aa		4.09	□□□□□ -1.75
SKI6	YGR195W	MRP49	P32388	137 aa		4.09	□□□□□ -1.75
SKI6	YGR195W	TKL2	P33315	681 aa		4.09	□□□□□ -1.75
SKI6	YGR195W	YBL059W	P34224	193 aa		4.09	□□□□□ -1.75
SKI6	YGR195W	MSA2	P36157	363 aa		4.09	□□□□□ -1.75
SKI6	YGR195W	PGD1	P40356	397 aa		4.09	□□□□□ -1.75
SKI6	YGR195W	AYR1	P40471	297 aa		4.09	□□□□□ -1.75
SKI6	YGR195W	FIS1	P40515	155 aa		4.09	□□□□□ -1.75
SKI6	YGR195W	HYR1	P40581	163 aa	Known RBP	4.09	□□□□□ -1.75
SKI6	YGR195W	PFS2	P42841	465 aa	Known RBP	4.09	□□□□□ -1.75
SKI6	YGR195W	TTI2	P47168	421 aa		4.09	□□□□□ -1.75
SKI6	YGR195W	ALG9	P53868	555 aa	Known RBP	4.09	□□□□□ -1.75
SKI6	YGR195W	SLM2	P53955	656 aa		4.09	□□□□□ -1.75
SKI6	YGR195W	TVP15	Q03860	143 aa		4.09	□□□□□ -1.75
SKI6	YGR195W	LDB18	Q07887	179 aa		4.09	□□□□□ -1.75
SKI6	YGR195W	YER078W-A	Q3E7A2	54 aa		4.09	□□□□□ -1.75
SKI6	YGR195W	LYS2	P07702	1392 aa		4.09	□□□□□ -1.75
SKI6	YGR195W	ADE6	P38972	1358 aa	Known RBP	4.09	□□□□□ -1.75
SKI6	YGR195W	CBP6	P07253	162 aa	Predicted RBP	4.08	□□□□□ -1.76
SKI6	YGR195W	URA5	P13298	226 aa	Known RBP	4.08	□□□□□ -1.76
SKI6	YGR195W	RPB3	P16370	318 aa	Known RBP	4.08	□□□□□ -1.76
SKI6	YGR195W	ARO2	P28777	376 aa	Known RBP	4.08	□□□□□ -1.76
SKI6	YGR195W	RNP1	P32385	249 aa		4.08	□□□□□ -1.76
SKI6	YGR195W	UTP30	P36144	274 aa	Known RBP	4.08	□□□□□ -1.76
SKI6	YGR195W	KRE9	P39005	276 aa		4.08	□□□□□ -1.76
SKI6	YGR195W	YRF1-2	P40105	1681 aa		4.08	□□□□□ -1.76
SKI6	YGR195W	DIG2	Q03373	323 aa	Known RBP	4.08	□□□□□ -1.76
SKI6	YGR195W	FYV7	Q12247	151 aa		4.08	□□□□□ -1.76
SKI6	YGR195W	DGK1	Q12382	290 aa		4.08	□□□□□ -1.76
SKI6	YGR195W	BNI1	P41832	1953 aa		4.07	□□□□□ -1.76
SKI6	YGR195W	NMT1	P14743	455 aa		4.07	□□□□□ -1.76
SKI6	YGR195W	PHO85	P17157	305 aa		4.07	□□□□□ -1.76
SKI6	YGR195W	CSH1	P38287	376 aa		4.07	□□□□□ -1.76
SKI6	YGR195W	NSG1	P38837	291 aa		4.07	□□□□□ -1.76
SKI6	YGR195W	RPA43	P46669	326 aa		4.07	□□□□□ -1.76
SKI6	YGR195W	CGI121	Q03705	181 aa	Known RBP	4.07	□□□□□ -1.76
SKI6	YGR195W	YOL029C	Q08187	201 aa		4.07	□□□□□ -1.76
SKI6	YGR195W	IES3	Q12345	250 aa		4.07	□□□□□ -1.76
SKI6	YGR195W	ISD11	Q6Q560	94 aa		4.07	□□□□□ -1.76
SKI6	YGR195W	ADH1	P00330	348 aa	Known RBP	4.06	□□□□□ -1.76
SKI6	YGR195W	TIR1	P10863	254 aa		4.06	□□□□□ -1.76
SKI6	YGR195W	RSA4	P25382	515 aa	Known RBP	4.06	□□□□□ -1.76
SKI6	YGR195W	UGX2	P32772	223 aa		4.06	□□□□□ -1.76
SKI6	YGR195W	COS8	P38723	381 aa		4.06	□□□□□ -1.76
SKI6	YGR195W	MIG3	P39943	394 aa		4.06	□□□□□ -1.76
SKI6	YGR195W	REE1	P40893	198 aa		4.06	□□□□□ -1.76
SKI6	YGR195W	GLR1	P41921	483 aa	Known RBP	4.06	□□□□□ -1.76
SKI6	YGR195W	PGU1	P47180	361 aa		4.06	□□□□□ -1.76
SKI6	YGR195W	RSM27	P53305	110 aa		4.06	□□□□□ -1.76
SKI6	YGR195W	CAB4	P53332	305 aa		4.06	□□□□□ -1.76
SKI6	YGR195W	ACT1	P60010	375 aa	Known RBP	4.06	□□□□□ -1.76
SKI6	YGR195W	DFM1	Q12743	341 aa	Known RBP	4.06	□□□□□ -1.76
SKI6	YGR195W	CCH1	P50077	2039 aa		4.05	□□□□□ -1.76
SKI6	YGR195W	YLR156W	P0CE96	114 aa		4.05	□□□□□ -1.76
SKI6	YGR195W	YLR159W	P0CE97	114 aa		4.05	□□□□□ -1.76
SKI6	YGR195W	YLR161W	P0CE98	114 aa		4.05	□□□□□ -1.76
SKI6	YGR195W	SPT15	P13393	240 aa	Known RBP	4.05	□□□□□ -1.76
SKI6	YGR195W	RCN1	P36054	211 aa		4.05	□□□□□ -1.76
SKI6	YGR195W	YBL081W	P38180	368 aa	Known RBP	4.05	□□□□□ -1.76
SKI6	YGR195W	FCY21	P40039	528 aa		4.05	□□□□□ -1.76
SKI6	YGR195W	SER2	P42941	309 aa		4.05	□□□□□ -1.76
SKI6	YGR195W	CAX4	P53223	239 aa		4.05	□□□□□ -1.76
SKI6	YGR195W	CWC27	Q02770	301 aa		4.05	□□□□□ -1.76
SKI6	YGR195W	YDL211C	Q12121	372 aa		4.05	□□□□□ -1.76
SKI6	YGR195W	YOR214C	Q12282	236 aa		4.05	□□□□□ -1.76
SKI6	YGR195W	YLR412C-A	Q3E742	68 aa		4.05	□□□□□ -1.76
SKI6	YGR195W	YBL112C	Q3E7Y4	105 aa		4.05	□□□□□ -1.76
SKI6	YGR195W	YML100W-A	Q8TGT0	57 aa		4.05	□□□□□ -1.76
SKI6	YGR195W	ATP5	P09457	212 aa		4.04	□□□□□ -1.76
SKI6	YGR195W	YCR101C	P25607	182 aa		4.04	□□□□□ -1.76
SKI6	YGR195W	VMA11	P32842	164 aa		4.04	□□□□□ -1.76
SKI6	YGR195W	GPI2	P46961	280 aa		4.04	□□□□□ -1.76
SKI6	YGR195W	VPS71	Q03433	280 aa		4.04	□□□□□ -1.76
SKI6	YGR195W	YMR253C	Q04835	414 aa		4.04	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 35.2 ms