RNA–Protein interactions for RNA: YGR136W

LSB1, Transcript of Negative regulator of actin nucleation-promoting factor activity, yeastyeast

Gene LSB1, Length 726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSB1YGR136W RPS25BP0C0T4 108 aaKnown RBP3.55□□□□□ -1.84
LSB1YGR136W MDH2P22133 377 aa3.55□□□□□ -1.84
LSB1YGR136W TIP1P27654 210 aaPredicted RBP3.55□□□□□ -1.84
LSB1YGR136W FMT1P32785 401 aa3.55□□□□□ -1.84
LSB1YGR136W PAN3P36102 679 aaPredicted RBP3.55□□□□□ -1.84
LSB1YGR136W RIB5P38145 238 aa3.55□□□□□ -1.84
LSB1YGR136W FIG1P38224 298 aa3.55□□□□□ -1.84
LSB1YGR136W UMP1P38293 148 aa3.55□□□□□ -1.84
LSB1YGR136W AME1P38313 324 aa3.55□□□□□ -1.84
LSB1YGR136W CUE1P38428 203 aa3.55□□□□□ -1.84
LSB1YGR136W POP2P39008 433 aa3.55□□□□□ -1.84
LSB1YGR136W IRC22P40006 225 aa3.55□□□□□ -1.84
LSB1YGR136W YER188WP40103 239 aa3.55□□□□□ -1.84
LSB1YGR136W YIL060WP40519 144 aa3.55□□□□□ -1.84
LSB1YGR136W LOC1P43586 204 aaPredicted RBP3.55□□□□□ -1.84
LSB1YGR136W BNS1P50084 137 aa3.55□□□□□ -1.84
LSB1YGR136W PCP1P53259 346 aa3.55□□□□□ -1.84
LSB1YGR136W YNR048WP53740 393 aa3.55□□□□□ -1.84
LSB1YGR136W YNR066CP53752 436 aa3.55□□□□□ -1.84
LSB1YGR136W RNH201P53942 307 aa3.55□□□□□ -1.84
LSB1YGR136W BUD25P85052 153 aa3.55□□□□□ -1.84
LSB1YGR136W TMA23Q03525 211 aa3.55□□□□□ -1.84
LSB1YGR136W FCF2Q12035 217 aaPredicted RBP3.55□□□□□ -1.84
LSB1YGR136W VAM3Q12241 283 aa3.55□□□□□ -1.84
LSB1YGR136W MCT1Q12283 360 aa3.55□□□□□ -1.84
LSB1YGR136W CRC1Q12289 327 aa3.55□□□□□ -1.84
LSB1YGR136W RPS25AQ3E792 108 aaPredicted RBP3.55□□□□□ -1.84
LSB1YGR136W TFB5Q3E7C1 72 aaPredicted RBP3.55□□□□□ -1.84
LSB1YGR136W FLO9P39712 1322 aa3.54□□□□□ -1.84
LSB1YGR136W COX2P00410 251 aa3.54□□□□□ -1.84
LSB1YGR136W GDH1P07262 454 aaKnown RBP3.54□□□□□ -1.84
LSB1YGR136W YPR170W-BP0C5R9 85 aa3.54□□□□□ -1.84
LSB1YGR136W YCR007CP25354 239 aa3.54□□□□□ -1.84
LSB1YGR136W TRR1P29509 319 aaKnown RBP3.54□□□□□ -1.84
LSB1YGR136W PMU1P36069 295 aa3.54□□□□□ -1.84
LSB1YGR136W MRPL39P36533 70 aa3.54□□□□□ -1.84
LSB1YGR136W MRPS9P38120 278 aa3.54□□□□□ -1.84
LSB1YGR136W XBP1P40489 647 aa3.54□□□□□ -1.84
LSB1YGR136W NIF3P53081 288 aa3.54□□□□□ -1.84
LSB1YGR136W YML018CQ03730 393 aa3.54□□□□□ -1.84
LSB1YGR136W GMC1Q04399 608 aa3.54□□□□□ -1.84
LSB1YGR136W HRI1Q05905 244 aaKnown RBP3.54□□□□□ -1.84
LSB1YGR136W SYM1Q06563 197 aa3.54□□□□□ -1.84
LSB1YGR136W PAU23Q07987 124 aa3.54□□□□□ -1.84
LSB1YGR136W USB1Q12208 290 aaKnown RBP3.54□□□□□ -1.84
LSB1YGR136W PAU17Q12370 124 aa3.54□□□□□ -1.84
LSB1YGR136W TDH3P00359 332 aaKnown RBP RIP-Chip data3.53□□□□□ -1.84not detected
LSB1YGR136W RPS16AP0CX51 143 aaKnown RBP3.53□□□□□ -1.84
LSB1YGR136W RPS16BP0CX52 143 aaKnown RBP3.53□□□□□ -1.84
LSB1YGR136W NHP6AP11632 93 aaKnown RBP3.53□□□□□ -1.84
LSB1YGR136W RPL30P14120 105 aaKnown RBP3.53□□□□□ -1.84
LSB1YGR136W RPI1P23250 407 aaKnown RBP3.53□□□□□ -1.84
LSB1YGR136W ARO2P28777 376 aaKnown RBP3.53□□□□□ -1.84
LSB1YGR136W ARO4P32449 370 aaKnown RBP3.53□□□□□ -1.84
LSB1YGR136W DAD2P36162 133 aa3.53□□□□□ -1.84
LSB1YGR136W YBR220CP38318 560 aa3.53□□□□□ -1.84
LSB1YGR136W BDH1P39714 382 aa3.53□□□□□ -1.84
LSB1YGR136W YGL262WP53054 175 aa3.53□□□□□ -1.84
LSB1YGR136W YNL234WP53857 426 aa3.53□□□□□ -1.84
LSB1YGR136W ALG9P53868 555 aaKnown RBP3.53□□□□□ -1.84
LSB1YGR136W ACT1P60010 375 aaKnown RBP3.53□□□□□ -1.84
LSB1YGR136W HHT1P61830 136 aa3.53□□□□□ -1.84
LSB1YGR136W YDR248CQ03786 193 aa3.53□□□□□ -1.84
LSB1YGR136W CAB5Q03941 241 aa3.53□□□□□ -1.84
LSB1YGR136W UPS3Q04006 179 aa3.53□□□□□ -1.84
LSB1YGR136W ATG39Q06159 398 aa3.53□□□□□ -1.84
LSB1YGR136W CSI2Q08054 341 aa3.53□□□□□ -1.84
LSB1YGR136W HRD1Q08109 551 aa3.53□□□□□ -1.84
LSB1YGR136W NAT5Q08689 176 aa3.53□□□□□ -1.84
LSB1YGR136W YDL180WQ12301 547 aa3.53□□□□□ -1.84
LSB1YGR136W IZH2Q12442 317 aa3.53□□□□□ -1.84
LSB1YGR136W SAL1D6W196 494 aa3.52□□□□□ -1.85
LSB1YGR136W ATP10P18496 279 aa3.52□□□□□ -1.85
LSB1YGR136W UTR5P32630 166 aa3.52□□□□□ -1.85
LSB1YGR136W ALK2P32789 676 aaPredicted RBP3.52□□□□□ -1.85
LSB1YGR136W PHD1P36093 366 aa3.52□□□□□ -1.85
LSB1YGR136W PRY2P36110 329 aa3.52□□□□□ -1.85
LSB1YGR136W YHL044WP38727 235 aa3.52□□□□□ -1.85
LSB1YGR136W RPF1P38805 295 aaKnown RBP3.52□□□□□ -1.85
LSB1YGR136W NSA2P40078 261 aaKnown RBP3.52□□□□□ -1.85
LSB1YGR136W RPL13BP40212 199 aaKnown RBP3.52□□□□□ -1.85
LSB1YGR136W PHS1P40857 217 aa3.52□□□□□ -1.85
LSB1YGR136W PAU5P43575 122 aa3.52□□□□□ -1.85
LSB1YGR136W ADD37Q03233 198 aa3.52□□□□□ -1.85
LSB1YGR136W GIM5Q04493 163 aa3.52□□□□□ -1.85
LSB1YGR136W YLR281CQ05863 155 aa3.52□□□□□ -1.85
LSB1YGR136W RAF1Q06891 181 aa3.52□□□□□ -1.85
LSB1YGR136W MCH1Q07376 486 aa3.52□□□□□ -1.85
LSB1YGR136W RPL13AQ12690 199 aaPredicted RBP3.52□□□□□ -1.85
LSB1YGR136W WIP1Q2V2P8 89 aa3.52□□□□□ -1.85
LSB1YGR136W SLO1Q3E784 85 aa3.52□□□□□ -1.85
LSB1YGR136W UBA3Q99344 299 aa3.52□□□□□ -1.85
LSB1YGR136W BPH1P25356 2167 aa3.52□□□□□ -1.85
LSB1YGR136W TPI1P00942 248 aaKnown RBP3.51□□□□□ -1.85
LSB1YGR136W STF1P01098 86 aa3.51□□□□□ -1.85
LSB1YGR136W BGL2P15703 313 aaKnown RBP3.51□□□□□ -1.85
LSB1YGR136W GLC7P32598 312 aaKnown RBP3.51□□□□□ -1.85
LSB1YGR136W ARC40P38328 384 aaKnown RBP3.51□□□□□ -1.85
LSB1YGR136W WSS1P38838 269 aa3.51□□□□□ -1.85
LSB1YGR136W YND1P40009 630 aa3.51□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 78.2 ms