RNA–Protein interactions for RNA: YGR116W

SPT6, Transcript of Nucleosome remodeling protein, yeastyeast

Gene SPT6, Length 4,356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT6YGR116W YOR186WQ08560 144 aa3.19□□□□□ -1.9
SPT6YGR116W FLO9P39712 1322 aa3.19□□□□□ -1.9
SPT6YGR116W MBF1O14467 151 aaKnown RBP3.19□□□□□ -1.9
SPT6YGR116W SOD1P00445 154 aaKnown RBP3.19□□□□□ -1.9
SPT6YGR116W YSF3P0C074 85 aaPredicted RBP3.19□□□□□ -1.9
SPT6YGR116W DAL80P26343 269 aa3.19□□□□□ -1.9
SPT6YGR116W NNK1P36003 928 aa3.19□□□□□ -1.9
SPT6YGR116W ELO1P39540 310 aa3.19□□□□□ -1.9
SPT6YGR116W SHR5P41912 237 aa3.19□□□□□ -1.9
SPT6YGR116W MSY1P48527 492 aa3.19□□□□□ -1.9
SPT6YGR116W HNT2P49775 206 aa3.19□□□□□ -1.9
SPT6YGR116W YNR040WP53736 256 aa3.19□□□□□ -1.9
SPT6YGR116W YMR210WQ03649 449 aa3.19□□□□□ -1.9
SPT6YGR116W YMR007WQ03675 126 aa3.19□□□□□ -1.9
SPT6YGR116W RPL30P14120 105 aaKnown RBP3.18□□□□□ -1.9
SPT6YGR116W DOG2P38773 246 aa3.18□□□□□ -1.9
SPT6YGR116W YND1P40009 630 aa3.18□□□□□ -1.9
SPT6YGR116W CTK2P46962 323 aa3.18□□□□□ -1.9
SPT6YGR116W YGR126WP53274 230 aa3.18□□□□□ -1.9
SPT6YGR116W GRH1Q04410 372 aaKnown RBP3.18□□□□□ -1.9
SPT6YGR116W YPR174CQ06616 221 aaPredicted RBP3.18□□□□□ -1.9
SPT6YGR116W RPB7P34087 171 aa3.18□□□□□ -1.9
SPT6YGR116W LYS1P38998 373 aaRIP-Chip data3.18□□□□□ -1.9not detected
SPT6YGR116W PRM5P40476 318 aa3.18□□□□□ -1.9
SPT6YGR116W YAR1P46683 200 aa3.18□□□□□ -1.9
SPT6YGR116W CRH1P53301 507 aa3.18□□□□□ -1.9
SPT6YGR116W ARR3Q06598 404 aa3.18□□□□□ -1.9
SPT6YGR116W LDS2Q08218 356 aa3.18□□□□□ -1.9
SPT6YGR116W IMG1P25626 169 aa3.18□□□□□ -1.9
SPT6YGR116W SRP21P32342 167 aa3.18□□□□□ -1.9
SPT6YGR116W FMP46P36141 133 aaKnown RBP3.18□□□□□ -1.9
SPT6YGR116W DER1P38307 211 aa3.18□□□□□ -1.9
SPT6YGR116W YGR269WP40326 108 aa3.18□□□□□ -1.9
SPT6YGR116W YJL028WP47062 111 aa3.18□□□□□ -1.9
SPT6YGR116W TDA4P47153 279 aa3.18□□□□□ -1.9
SPT6YGR116W RKI1Q12189 258 aa3.18□□□□□ -1.9
SPT6YGR116W CYT1P07143 309 aa3.17□□□□□ -1.9
SPT6YGR116W ARF1P11076 181 aaKnown RBP3.17□□□□□ -1.9
SPT6YGR116W NOP1P15646 327 aaKnown RBP3.17□□□□□ -1.9
SPT6YGR116W CMC1P36064 111 aa3.17□□□□□ -1.9
SPT6YGR116W YHR138CP38841 114 aaPredicted RBP3.17□□□□□ -1.9
SPT6YGR116W YCK3P39962 524 aa3.17□□□□□ -1.9
SPT6YGR116W CCS1P40202 249 aaKnown RBP3.17□□□□□ -1.9
SPT6YGR116W BOR1P53838 576 aa3.17□□□□□ -1.9
SPT6YGR116W YHM2Q04013 314 aa3.17□□□□□ -1.9
SPT6YGR116W WIP1Q2V2P8 89 aa3.17□□□□□ -1.9
SPT6YGR116W HTL1Q9URQ5 78 aa3.17□□□□□ -1.9
SPT6YGR116W HEM4P06174 275 aa3.17□□□□□ -1.9
SPT6YGR116W SEC11P15367 167 aa3.17□□□□□ -1.9
SPT6YGR116W HYP2P23301 157 aaKnown RBP3.17□□□□□ -1.9
SPT6YGR116W MIG1P27705 504 aa3.17□□□□□ -1.9
SPT6YGR116W COX18P53239 316 aa3.17□□□□□ -1.9
SPT6YGR116W FHN1P53279 174 aa3.17□□□□□ -1.9
SPT6YGR116W ELC1Q03071 99 aa3.17□□□□□ -1.9
SPT6YGR116W YMR254CQ04838 102 aa3.17□□□□□ -1.9
SPT6YGR116W SEI1Q06058 285 aa3.17□□□□□ -1.9
SPT6YGR116W SWT1Q12104 458 aa3.17□□□□□ -1.9
SPT6YGR116W YCR024C-BQ3E7Z8 88 aa3.17□□□□□ -1.9
SPT6YGR116W YOR304C-AO14468 76 aa3.17□□□□□ -1.9
SPT6YGR116W RPS2P25443 254 aaKnown RBP3.17□□□□□ -1.9
SPT6YGR116W URK1P27515 501 aa3.17□□□□□ -1.9
SPT6YGR116W YKR070WP36151 352 aaKnown RBP3.17□□□□□ -1.9
SPT6YGR116W NTC20P38302 140 aaPredicted RBP3.17□□□□□ -1.9
SPT6YGR116W CUP9P41817 306 aa3.17□□□□□ -1.9
SPT6YGR116W NIP7Q08962 181 aaKnown RBP3.17□□□□□ -1.9
SPT6YGR116W ADH1P00330 348 aaKnown RBP3.16□□□□□ -1.9
SPT6YGR116W RPL12AP0CX53 165 aaKnown RBP3.16□□□□□ -1.9
SPT6YGR116W RPL12BP0CX54 165 aa3.16□□□□□ -1.9
SPT6YGR116W MED6P38782 295 aa3.16□□□□□ -1.9
SPT6YGR116W SEC24P40482 926 aaKnown RBP3.16□□□□□ -1.9
SPT6YGR116W SNP1Q00916 300 aaPredicted RBP3.16□□□□□ -1.9
SPT6YGR116W YAL064W-BO13512 126 aa3.16□□□□□ -1.9
SPT6YGR116W MRS1P07266 363 aa3.16□□□□□ -1.9
SPT6YGR116W YFL068WP0CX99 160 aa3.16□□□□□ -1.9
SPT6YGR116W YLL066W-AP0CY00 160 aa3.16□□□□□ -1.9
SPT6YGR116W YLL067W-AP0CY01 160 aa3.16□□□□□ -1.9
SPT6YGR116W TIR1P10863 254 aa3.16□□□□□ -1.9
SPT6YGR116W ERS1P17261 260 aa3.16□□□□□ -1.9
SPT6YGR116W FPR1P20081 114 aaKnown RBP3.16□□□□□ -1.9
SPT6YGR116W HSP12P22943 109 aaKnown RBP3.16□□□□□ -1.9
SPT6YGR116W ZRT1P32804 376 aa3.16□□□□□ -1.9
SPT6YGR116W PRS4P38063 326 aaPredicted RBP3.16□□□□□ -1.9
SPT6YGR116W UBS1P38290 277 aa3.16□□□□□ -1.9
SPT6YGR116W YOR292CQ08743 309 aa3.16□□□□□ -1.9
SPT6YGR116W YIL102C-AQ2V2P5 75 aa3.16□□□□□ -1.9
SPT6YGR116W CUP2P15315 225 aa3.16□□□□□ -1.9
SPT6YGR116W QRI5P32344 111 aa3.16□□□□□ -1.9
SPT6YGR116W PAM17P36147 197 aa3.16□□□□□ -1.9
SPT6YGR116W DPP1Q05521 289 aa3.16□□□□□ -1.9
SPT6YGR116W DIC1Q06143 298 aa3.16□□□□□ -1.9
SPT6YGR116W MRL1Q06815 381 aa3.16□□□□□ -1.9
SPT6YGR116W CYC7P00045 113 aa3.16□□□□□ -1.9
SPT6YGR116W RPL7AP05737 244 aaKnown RBP3.16□□□□□ -1.9
SPT6YGR116W DAT1P13483 248 aaKnown RBP3.16□□□□□ -1.9
SPT6YGR116W SAG1P20840 650 aa3.16□□□□□ -1.9
SPT6YGR116W YKL107WP34251 309 aa3.16□□□□□ -1.9
SPT6YGR116W ECM33P38248 429 aaKnown RBP3.16□□□□□ -1.9
SPT6YGR116W PCL7P40186 285 aa3.16□□□□□ -1.9
SPT6YGR116W YIL163CP40448 117 aa3.16□□□□□ -1.9
SPT6YGR116W MOB1P40484 314 aa3.16□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 79.2 ms