RNA–Protein interactions for RNA: YGL173C

XRN1, Transcript of Evolutionarily-conserved 5'-3' exonuclease, yeastyeast

Gene XRN1, Length 4,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
XRN1YGL173C SAE3P89114 91 aa2.68□□□□□ -1.98
XRN1YGL173C YDR476CQ03362 224 aa2.68□□□□□ -1.98
XRN1YGL173C YDR102CQ03864 110 aa2.68□□□□□ -1.98
XRN1YGL173C THI74Q04083 370 aa2.68□□□□□ -1.98
XRN1YGL173C YPL264CQ08980 353 aa2.68□□□□□ -1.98
XRN1YGL173C YCR043CP25361 127 aa2.68□□□□□ -1.98
XRN1YGL173C BUB2P26448 306 aaPredicted RBP2.68□□□□□ -1.98
XRN1YGL173C OAC1P32332 324 aa2.68□□□□□ -1.98
XRN1YGL173C SRX1P36077 127 aa2.68□□□□□ -1.98
XRN1YGL173C MET30P39014 640 aa2.68□□□□□ -1.98
XRN1YGL173C GLE2P40066 365 aa2.68□□□□□ -1.98
XRN1YGL173C YPL073CP40323 161 aa2.68□□□□□ -1.98
XRN1YGL173C SER2P42941 309 aa2.68□□□□□ -1.98
XRN1YGL173C GRX5Q02784 150 aa2.68□□□□□ -1.98
XRN1YGL173C INP1Q03694 420 aa2.68□□□□□ -1.98
XRN1YGL173C YPL162CQ12042 273 aa2.68□□□□□ -1.98
XRN1YGL173C MCP1Q12106 302 aa2.68□□□□□ -1.98
XRN1YGL173C Q0144Q9ZZW2 109 aa2.68□□□□□ -1.98
XRN1YGL173C KIN28P06242 306 aa2.67□□□□□ -1.98
XRN1YGL173C YCR090CP25654 182 aaKnown RBP2.67□□□□□ -1.98
XRN1YGL173C YPT53P36019 220 aa2.67□□□□□ -1.98
XRN1YGL173C MRPL27P36526 146 aaPredicted RBP2.67□□□□□ -1.98
XRN1YGL173C HEK2P38199 381 aaKnown RBP RIP-Chip data2.67□□□□□ -1.98not detected
XRN1YGL173C UMP1P38293 148 aa2.67□□□□□ -1.98
XRN1YGL173C FCY21P40039 528 aa2.67□□□□□ -1.98
XRN1YGL173C YMR099CQ03161 297 aaKnown RBP2.67□□□□□ -1.98
XRN1YGL173C LPP1Q04396 274 aa2.67□□□□□ -1.98
XRN1YGL173C PRP11Q07350 266 aaPredicted RBP2.67□□□□□ -1.98
XRN1YGL173C PRR2Q12310 699 aa2.67□□□□□ -1.98
XRN1YGL173C AIM34Q03673 198 aa2.67□□□□□ -1.98
XRN1YGL173C NEJ1Q06148 342 aa2.67□□□□□ -1.98
XRN1YGL173C RPS8AP0CX39 200 aaKnown RBP2.67□□□□□ -1.98
XRN1YGL173C RPS8BP0CX40 200 aaKnown RBP2.67□□□□□ -1.98
XRN1YGL173C YBL059WP34224 193 aa2.67□□□□□ -1.98
XRN1YGL173C PGD1P40356 397 aa2.67□□□□□ -1.98
XRN1YGL173C AVT7P40501 490 aa2.67□□□□□ -1.98
XRN1YGL173C GPI14P47088 403 aaKnown RBP2.67□□□□□ -1.98
XRN1YGL173C MDM34P53083 459 aa2.67□□□□□ -1.98
XRN1YGL173C ACC1Q00955 2233 aaKnown RBP2.67□□□□□ -1.98
XRN1YGL173C CUP2P15315 225 aa2.66□□□□□ -1.98
XRN1YGL173C BET1P22804 142 aa2.66□□□□□ -1.98
XRN1YGL173C LDB16P25587 256 aa2.66□□□□□ -1.98
XRN1YGL173C SPS18P32572 300 aa2.66□□□□□ -1.98
XRN1YGL173C YBR062CP38239 180 aa2.66□□□□□ -1.98
XRN1YGL173C SSH1P38353 490 aaKnown RBP2.66□□□□□ -1.98
XRN1YGL173C AVT2P39981 480 aa2.66□□□□□ -1.98
XRN1YGL173C YGR201CP42936 225 aa2.66□□□□□ -1.98
XRN1YGL173C HST4P53688 370 aa2.66□□□□□ -1.98
XRN1YGL173C MZM1Q03429 123 aaPredicted RBP2.66□□□□□ -1.98
XRN1YGL173C NIP7Q08962 181 aaKnown RBP2.66□□□□□ -1.98
XRN1YGL173C DGK1Q12382 290 aa2.66□□□□□ -1.98
XRN1YGL173C YLR361C-AQ3E795 98 aa2.66□□□□□ -1.98
XRN1YGL173C SIR2P06700 562 aa2.66□□□□□ -1.98
XRN1YGL173C CLB6P32943 380 aa2.66□□□□□ -1.98
XRN1YGL173C SNC2P33328 115 aa2.66□□□□□ -1.98
XRN1YGL173C SKG1P36169 355 aa2.66□□□□□ -1.98
XRN1YGL173C CAT5P41735 233 aa2.66□□□□□ -1.98
XRN1YGL173C SCW4P53334 386 aaKnown RBP2.66□□□□□ -1.98
XRN1YGL173C CRZ1P53968 678 aa2.66□□□□□ -1.98
XRN1YGL173C RPL21AQ02753 160 aaKnown RBP2.66□□□□□ -1.98
XRN1YGL173C CWC27Q02770 301 aa2.66□□□□□ -1.98
XRN1YGL173C YMD8Q03697 442 aa2.66□□□□□ -1.98
XRN1YGL173C RPL21BQ12672 160 aaKnown RBP2.66□□□□□ -1.98
XRN1YGL173C YCR023CP25351 611 aa2.66□□□□□ -1.98
XRN1YGL173C PAN3P36102 679 aaPredicted RBP2.66□□□□□ -1.98
XRN1YGL173C PRS3P38689 320 aaKnown RBP2.66□□□□□ -1.98
XRN1YGL173C ARO8P53090 500 aaKnown RBP2.66□□□□□ -1.98
XRN1YGL173C CRH1P53301 507 aa2.66□□□□□ -1.98
XRN1YGL173C GRX8Q05926 109 aa2.66□□□□□ -1.98
XRN1YGL173C Q0255P03881 472 aa2.66□□□□□ -1.98
XRN1YGL173C CPR1P14832 162 aaKnown RBP2.66□□□□□ -1.98
XRN1YGL173C UGX2P32772 223 aa2.66□□□□□ -1.98
XRN1YGL173C EGT2P42835 1041 aa2.66□□□□□ -1.98
XRN1YGL173C DOC1P53068 250 aa2.66□□□□□ -1.98
XRN1YGL173C OSH6Q02201 448 aa2.66□□□□□ -1.98
XRN1YGL173C API2Q04413 109 aa2.66□□□□□ -1.98
XRN1YGL173C YMR317WQ04893 1140 aa2.66□□□□□ -1.98
XRN1YGL173C RRG7Q08774 242 aaPredicted RBP2.66□□□□□ -1.98
XRN1YGL173C NAT3Q06504 195 aa2.65□□□□□ -1.98
XRN1YGL173C DDP1Q99321 188 aaKnown RBP2.65□□□□□ -1.98
XRN1YGL173C CPA1P07258 411 aaKnown RBP2.65□□□□□ -1.99
XRN1YGL173C SMD1Q02260 146 aaPredicted RBP2.65□□□□□ -1.99
XRN1YGL173C SPS2P08459 502 aa2.65□□□□□ -1.99
XRN1YGL173C VMA11P32842 164 aa2.65□□□□□ -1.99
XRN1YGL173C YGR026WP53217 278 aa2.65□□□□□ -1.99
XRN1YGL173C TVP18Q04767 167 aa2.65□□□□□ -1.99
XRN1YGL173C ARR2Q06597 130 aa2.65□□□□□ -1.99
XRN1YGL173C ATG10Q07879 167 aa2.65□□□□□ -1.99
XRN1YGL173C YBL008W-AQ3E821 79 aa2.65□□□□□ -1.99
XRN1YGL173C YBR285WP38354 144 aa2.64□□□□□ -1.99
XRN1YGL173C GLC8P41818 229 aa2.64□□□□□ -1.99
XRN1YGL173C PRM10P42946 383 aa2.64□□□□□ -1.99
XRN1YGL173C AIM25P47140 327 aa2.64□□□□□ -1.99
XRN1YGL173C DAS2Q12084 232 aa2.64□□□□□ -1.99
XRN1YGL173C SCS22Q6Q595 175 aa2.64□□□□□ -1.99
XRN1YGL173C CKS1P20486 150 aaKnown RBP2.64□□□□□ -1.99
XRN1YGL173C UTP30P36144 274 aaKnown RBP2.64□□□□□ -1.99
XRN1YGL173C SLM6P38343 150 aa2.64□□□□□ -1.99
XRN1YGL173C PTH1P38876 190 aaKnown RBP2.64□□□□□ -1.99
XRN1YGL173C YJR111CP47148 283 aaKnown RBP2.64□□□□□ -1.99
Retrieved 100 of 5,963 RNA–protein pairs in 63.8 ms