RNA–Protein interactions for RNA: YGL120C

PRP43, Transcript of RNA helicase in the DEAH-box family, yeast

Gene PRP43, Length 2,304 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PRP43	YGL120C	RPS13	P05756	151 aa	Known RBP	4.17	□□□□□ -1.74
PRP43	YGL120C	RPL18A	P0CX49	186 aa	Known RBP	4.17	□□□□□ -1.74
PRP43	YGL120C	RPL18B	P0CX50	186 aa	Known RBP	4.17	□□□□□ -1.74
PRP43	YGL120C	MAK32	P23060	363 aa		4.17	□□□□□ -1.74
PRP43	YGL120C	ATS1	P31386	333 aa		4.17	□□□□□ -1.74
PRP43	YGL120C	MRPS5	P33759	307 aa		4.17	□□□□□ -1.74
PRP43	YGL120C	PAU16	P35994	123 aa		4.17	□□□□□ -1.74
PRP43	YGL120C	YEA4	P40004	342 aa		4.17	□□□□□ -1.74
PRP43	YGL120C	UBX6	P47049	396 aa		4.17	□□□□□ -1.74
PRP43	YGL120C	YGL262W	P53054	175 aa		4.17	□□□□□ -1.74
PRP43	YGL120C	GEP7	P53171	287 aa		4.17	□□□□□ -1.74
PRP43	YGL120C	YNL165W	P53891	406 aa		4.17	□□□□□ -1.74
PRP43	YGL120C	PRS5	Q12265	496 aa	Known RBP	4.17	□□□□□ -1.74
PRP43	YGL120C	JID1	Q12350	301 aa		4.17	□□□□□ -1.74
PRP43	YGL120C	MOT1	P32333	1867 aa		4.17	□□□□□ -1.74
PRP43	YGL120C	OPI3	P05375	206 aa		4.16	□□□□□ -1.74
PRP43	YGL120C	TRX3	P25372	127 aa		4.16	□□□□□ -1.74
PRP43	YGL120C	MLF3	P32047	452 aa		4.16	□□□□□ -1.74
PRP43	YGL120C	EMC3	P36039	253 aa		4.16	□□□□□ -1.74
PRP43	YGL120C	YER079W	P40052	210 aa	Known RBP	4.16	□□□□□ -1.74
PRP43	YGL120C	CYB5	P40312	120 aa		4.16	□□□□□ -1.74
PRP43	YGL120C	YJL213W	P40896	331 aa		4.16	□□□□□ -1.74
PRP43	YGL120C	SFT1	P43682	97 aa		4.16	□□□□□ -1.74
PRP43	YGL120C	SCW4	P53334	386 aa	Known RBP	4.16	□□□□□ -1.74
PRP43	YGL120C	YMR103C	Q04436	120 aa		4.16	□□□□□ -1.74
PRP43	YGL120C	HPF1	Q05164	967 aa		4.16	□□□□□ -1.74
PRP43	YGL120C	ARR3	Q06598	404 aa		4.16	□□□□□ -1.74
PRP43	YGL120C	ENB1	Q08299	606 aa		4.16	□□□□□ -1.74
PRP43	YGL120C	DGA1	Q08650	418 aa		4.16	□□□□□ -1.74
PRP43	YGL120C	YPL264C	Q08980	353 aa		4.16	□□□□□ -1.74
PRP43	YGL120C	RPL28	P02406	149 aa	Known RBP	4.16	□□□□□ -1.74
PRP43	YGL120C	VMA3	P25515	160 aa		4.16	□□□□□ -1.74
PRP43	YGL120C	YKL102C	P34249	101 aa		4.16	□□□□□ -1.74
PRP43	YGL120C	PEX22	P39718	180 aa		4.16	□□□□□ -1.74
PRP43	YGL120C	KNH1	P50112	268 aa		4.16	□□□□□ -1.74
PRP43	YGL120C	YMR090W	Q04304	227 aa	Known RBP	4.16	□□□□□ -1.74
PRP43	YGL120C	FCY1	Q12178	158 aa		4.16	□□□□□ -1.74
PRP43	YGL120C	PEX11	Q12462	236 aa		4.16	□□□□□ -1.74
PRP43	YGL120C	YIL102C-A	Q2V2P5	75 aa		4.16	□□□□□ -1.74
PRP43	YGL120C	COX19	Q3E731	98 aa		4.16	□□□□□ -1.74
PRP43	YGL120C	YLR412C-A	Q3E742	68 aa		4.16	□□□□□ -1.74
PRP43	YGL120C	YNL277W-A	Q3E7Z0	62 aa		4.16	□□□□□ -1.74
PRP43	YGL120C	YCR099C	P25657	155 aa		4.15	□□□□□ -1.74
PRP43	YGL120C	ECM14	P38836	430 aa		4.15	□□□□□ -1.74
PRP43	YGL120C	CCS1	P40202	249 aa	Known RBP	4.15	□□□□□ -1.74
PRP43	YGL120C	TOS2	P50078	622 aa		4.15	□□□□□ -1.74
PRP43	YGL120C	YGR219W	P53307	113 aa		4.15	□□□□□ -1.74
PRP43	YGL120C	YML079W	Q03629	201 aa		4.15	□□□□□ -1.74
PRP43	YGL120C	ATG41	Q12048	136 aa		4.15	□□□□□ -1.74
PRP43	YGL120C	YDR215C	Q12240	137 aa		4.15	□□□□□ -1.74
PRP43	YGL120C	UTP23	Q12339	254 aa	Known RBP	4.15	□□□□□ -1.74
PRP43	YGL120C	YOR338W	Q99326	363 aa		4.15	□□□□□ -1.74
PRP43	YGL120C	YRF1-1	P0CX20	1796 aa		4.15	□□□□□ -1.75
PRP43	YGL120C	YRF1-5	P0CX21	1796 aa		4.15	□□□□□ -1.75
PRP43	YGL120C	YRF1-8	P0CX22	1796 aa		4.15	□□□□□ -1.75
PRP43	YGL120C	YLR302C	O13544	120 aa		4.15	□□□□□ -1.75
PRP43	YGL120C	MRS1	P07266	363 aa		4.15	□□□□□ -1.75
PRP43	YGL120C	MSI1	P13712	422 aa		4.15	□□□□□ -1.75
PRP43	YGL120C	YJU3	P28321	313 aa		4.15	□□□□□ -1.75
PRP43	YGL120C	MKK1	P32490	508 aa		4.15	□□□□□ -1.75
PRP43	YGL120C	SPO73	P40031	143 aa		4.15	□□□□□ -1.75
PRP43	YGL120C	HMF1	P40037	129 aa	Known RBP	4.15	□□□□□ -1.75
PRP43	YGL120C	BAT2	P47176	376 aa	Known RBP	4.15	□□□□□ -1.75
PRP43	YGL120C	CAX4	P53223	239 aa		4.15	□□□□□ -1.75
PRP43	YGL120C	ARC18	Q05933	178 aa	Known RBP	4.15	□□□□□ -1.75
PRP43	YGL120C	YPL162C	Q12042	273 aa		4.15	□□□□□ -1.75
PRP43	YGL120C	BOL1	Q3E793	110 aa		4.15	□□□□□ -1.75
PRP43	YGL120C	ATG40	Q99325	256 aa		4.15	□□□□□ -1.75
PRP43	YGL120C	ILV1	P00927	576 aa	Known RBP	4.14	□□□□□ -1.75
PRP43	YGL120C	YMC2	P38087	329 aa		4.14	□□□□□ -1.75
PRP43	YGL120C	SDS24	P38314	527 aa		4.14	□□□□□ -1.75
PRP43	YGL120C	YND1	P40009	630 aa		4.14	□□□□□ -1.75
PRP43	YGL120C	VHS2	P40463	436 aa		4.14	□□□□□ -1.75
PRP43	YGL120C	RRT5	P43607	289 aa		4.14	□□□□□ -1.75
PRP43	YGL120C	UBP8	P50102	471 aa		4.14	□□□□□ -1.75
PRP43	YGL120C	VEL1	P53058	206 aa		4.14	□□□□□ -1.75
PRP43	YGL120C	EMC4	P53073	190 aa		4.14	□□□□□ -1.75
PRP43	YGL120C	TEX1	P53851	422 aa	Known RBP	4.14	□□□□□ -1.75
PRP43	YGL120C	YPL039W	Q03080	316 aa		4.14	□□□□□ -1.75
PRP43	YGL120C	YHM2	Q04013	314 aa		4.14	□□□□□ -1.75
PRP43	YGL120C	YMR087W	Q04299	284 aa		4.14	□□□□□ -1.75
PRP43	YGL120C	YLR346C	Q06139	101 aa		4.14	□□□□□ -1.75
PRP43	YGL120C	SPO24	Q3E752	67 aa		4.14	□□□□□ -1.75
PRP43	YGL120C	FLO11	P08640	1367 aa		4.14	□□□□□ -1.75
PRP43	YGL120C	RPL2A	P0CX45	254 aa	Known RBP	4.13	□□□□□ -1.75
PRP43	YGL120C	RPL2B	P0CX46	254 aa	Known RBP	4.13	□□□□□ -1.75
PRP43	YGL120C	YCR085W	P25650	117 aa		4.13	□□□□□ -1.75
PRP43	YGL120C	UMP1	P38293	148 aa		4.13	□□□□□ -1.75
PRP43	YGL120C	SGN1	P40561	250 aa	Known RBP RIP-Chip data	4.13	□□□□□ -1.75	not detected
PRP43	YGL120C	YOR097C	Q12274	175 aa	Predicted RBP	4.13	□□□□□ -1.75
PRP43	YGL120C	RPS21B	Q3E754	87 aa	Known RBP	4.13	□□□□□ -1.75
PRP43	YGL120C	REC114	P32841	428 aa		4.13	□□□□□ -1.75
PRP43	YGL120C	ASK1	P35734	292 aa		4.13	□□□□□ -1.75
PRP43	YGL120C	SPL2	P38839	148 aa		4.13	□□□□□ -1.75
PRP43	YGL120C	MST28	P39552	234 aa		4.13	□□□□□ -1.75
PRP43	YGL120C	YPL073C	P40323	161 aa		4.13	□□□□□ -1.75
PRP43	YGL120C	EGT2	P42835	1041 aa		4.13	□□□□□ -1.75
PRP43	YGL120C	VPS71	Q03433	280 aa		4.13	□□□□□ -1.75
PRP43	YGL120C	RAF1	Q06891	181 aa		4.13	□□□□□ -1.75
PRP43	YGL120C	POC4	Q12245	148 aa	Predicted RBP	4.13	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 70.1 ms