RNA–Protein interactions for RNA: YGL011C

SCL1, Transcript of Alpha 1 subunit of the 20S proteasome, yeastyeast

Gene SCL1, Length 759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCL1YGL011C TY1B-PR2P0C2J0 1756 aa2.16□□□□□ -2.06
SCL1YGL011C TY1B-PR3P0C2J1 1755 aaKnown RBP2.16□□□□□ -2.06
SCL1YGL011C TY1B-JR1P47098 1755 aa2.16□□□□□ -2.06
SCL1YGL011C TY1B-ML2Q03434 1755 aaKnown RBP2.16□□□□□ -2.06
SCL1YGL011C TY1B-ER1Q03612 1755 aa2.16□□□□□ -2.06
SCL1YGL011C TY1B-ML1Q04711 1755 aaKnown RBP2.16□□□□□ -2.06
SCL1YGL011C TY1B-GR2Q12269 1755 aa2.16□□□□□ -2.06
SCL1YGL011C TY1B-OLQ12273 1755 aa2.16□□□□□ -2.06
SCL1YGL011C TY1B-PLQ12414 1755 aaKnown RBP2.16□□□□□ -2.06
SCL1YGL011C SSK2P53599 1579 aa2.16□□□□□ -2.06
SCL1YGL011C SCC2Q04002 1493 aa2.16□□□□□ -2.06
SCL1YGL011C YAR023CD6VPM8 179 aa2.16□□□□□ -2.06
SCL1YGL011C NMT1P14743 455 aa2.16□□□□□ -2.06
SCL1YGL011C TVP38P36164 337 aa2.16□□□□□ -2.06
SCL1YGL011C YER134CP40081 178 aa2.16□□□□□ -2.06
SCL1YGL011C RRP17Q04031 235 aaPredicted RBP2.16□□□□□ -2.06
SCL1YGL011C YDL180WQ12301 547 aa2.16□□□□□ -2.06
SCL1YGL011C NUP170P38181 1502 aa2.16□□□□□ -2.06
SCL1YGL011C GEA1P47102 1408 aaPredicted RBP2.16□□□□□ -2.06
SCL1YGL011C TAH1P25638 111 aaPredicted RBP2.15□□□□□ -2.07
SCL1YGL011C CPR5P35176 225 aa2.15□□□□□ -2.07
SCL1YGL011C SRL3P36167 246 aa2.15□□□□□ -2.07
SCL1YGL011C YKR005CQ02203 525 aa2.15□□□□□ -2.07
SCL1YGL011C MZM1Q03429 123 aaPredicted RBP2.15□□□□□ -2.07
SCL1YGL011C COA4Q05809 96 aa2.15□□□□□ -2.07
SCL1YGL011C YPD1Q07688 167 aa2.15□□□□□ -2.07
SCL1YGL011C YLR031WQ07978 186 aa2.15□□□□□ -2.07
SCL1YGL011C YML100W-AQ8TGT0 57 aa2.15□□□□□ -2.07
SCL1YGL011C PDR5P33302 1511 aaKnown RBP2.15□□□□□ -2.07
SCL1YGL011C ROM2P51862 1356 aaKnown RBP2.14□□□□□ -2.07
SCL1YGL011C DNA2P38859 1522 aa2.14□□□□□ -2.07
SCL1YGL011C UTP11P34247 250 aaPredicted RBP2.14□□□□□ -2.07
SCL1YGL011C CAF4P36130 643 aa2.14□□□□□ -2.07
SCL1YGL011C POP7P38291 140 aa2.14□□□□□ -2.07
SCL1YGL011C YPL073CP40323 161 aa2.14□□□□□ -2.07
SCL1YGL011C SPC24Q04477 213 aa2.14□□□□□ -2.07
SCL1YGL011C SPC2Q04969 178 aa2.14□□□□□ -2.07
SCL1YGL011C NAT3Q06504 195 aa2.14□□□□□ -2.07
SCL1YGL011C IQG1Q12280 1495 aa2.14□□□□□ -2.07
SCL1YGL011C HAP1P0CE41 1502 aa2.13□□□□□ -2.07
SCL1YGL011C YBL010CP32788 280 aa2.13□□□□□ -2.07
SCL1YGL011C LSM1P47017 172 aaKnown RBP2.13□□□□□ -2.07
SCL1YGL011C MPA43P53583 542 aaPredicted RBP2.13□□□□□ -2.07
SCL1YGL011C GRX8Q05926 109 aa2.13□□□□□ -2.07
SCL1YGL011C YLR036CQ07986 203 aa2.13□□□□□ -2.07
SCL1YGL011C IRC23Q08416 157 aa2.13□□□□□ -2.07
SCL1YGL011C OCA6Q12454 224 aa2.13□□□□□ -2.07
SCL1YGL011C CAT8P39113 1433 aa2.13□□□□□ -2.07
SCL1YGL011C USO1P25386 1790 aa2.13□□□□□ -2.07
SCL1YGL011C TY1B-BRQ12193 1756 aa2.13□□□□□ -2.07
SCL1YGL011C TY1B-GR3Q12316 1755 aa2.13□□□□□ -2.07
SCL1YGL011C TY1B-ORQ92393 1755 aa2.13□□□□□ -2.07
SCL1YGL011C TRX3P25372 127 aa2.12□□□□□ -2.07
SCL1YGL011C YER076CP40049 302 aa2.12□□□□□ -2.07
SCL1YGL011C NRK1P53915 240 aa2.12□□□□□ -2.07
SCL1YGL011C UIP4Q08926 304 aa2.12□□□□□ -2.07
SCL1YGL011C GRE1Q08969 168 aa2.12□□□□□ -2.07
SCL1YGL011C YOR289WQ12012 251 aaPredicted RBP2.12□□□□□ -2.07
SCL1YGL011C NUP159P40477 1460 aa2.12□□□□□ -2.07
SCL1YGL011C MSB2P32334 1306 aa2.12□□□□□ -2.07
SCL1YGL011C SNF2P22082 1703 aa2.11□□□□□ -2.07
SCL1YGL011C CMD1P06787 147 aaKnown RBP2.11□□□□□ -2.07
SCL1YGL011C YGL041W-AP0C5N3 154 aa2.11□□□□□ -2.07
SCL1YGL011C YAP3P38749 330 aa2.11□□□□□ -2.07
SCL1YGL011C TMA22P47089 198 aaPredicted RBP2.11□□□□□ -2.07
SCL1YGL011C TDA4P47153 279 aa2.11□□□□□ -2.07
SCL1YGL011C SNO1Q03144 224 aa2.11□□□□□ -2.07
SCL1YGL011C YMR295CQ03559 197 aa2.11□□□□□ -2.07
SCL1YGL011C YPR174CQ06616 221 aaPredicted RBP2.11□□□□□ -2.07
SCL1YGL011C YCL001W-BQ96VH2 84 aa2.11□□□□□ -2.07
SCL1YGL011C REV3P14284 1504 aa2.11□□□□□ -2.07
SCL1YGL011C TY1B-JR2P47100 1755 aaKnown RBP2.1□□□□□ -2.07
SCL1YGL011C TY1B-ER2Q03619 1755 aa2.1□□□□□ -2.07
SCL1YGL011C TY1B-MR1Q04214 1755 aa2.1□□□□□ -2.07
SCL1YGL011C TY1B-MR2Q04670 1755 aaKnown RBP2.1□□□□□ -2.07
SCL1YGL011C TY1B-LR1Q12088 1755 aaKnown RBP2.1□□□□□ -2.07
SCL1YGL011C TY1B-NL1Q12112 1755 aa2.1□□□□□ -2.07
SCL1YGL011C TY1B-GR1Q12141 1755 aa2.1□□□□□ -2.07
SCL1YGL011C TY1B-BLQ12490 1755 aa2.1□□□□□ -2.07
SCL1YGL011C HIR3P47171 1648 aa2.1□□□□□ -2.07
SCL1YGL011C HSP30P25619 332 aa2.1□□□□□ -2.07
SCL1YGL011C BUD23P25627 275 aaPredicted RBP2.1□□□□□ -2.07
SCL1YGL011C MGT1P26188 188 aa2.1□□□□□ -2.07
SCL1YGL011C YFL019CP43576 117 aa2.1□□□□□ -2.07
SCL1YGL011C PAC10P48363 199 aa2.1□□□□□ -2.07
SCL1YGL011C RUB1Q03919 77 aa2.1□□□□□ -2.07
SCL1YGL011C DAS2Q12084 232 aa2.1□□□□□ -2.07
SCL1YGL011C RPO21P04050 1733 aaKnown RBP2.1□□□□□ -2.07
SCL1YGL011C SWR1Q05471 1514 aa2.1□□□□□ -2.07
SCL1YGL011C RPS24AP0CX31 135 aaKnown RBP2.09□□□□□ -2.07
SCL1YGL011C RPS24BP0CX32 135 aaKnown RBP2.09□□□□□ -2.07
SCL1YGL011C PHO85P17157 305 aa2.09□□□□□ -2.07
SCL1YGL011C YCR101CP25607 182 aa2.09□□□□□ -2.07
SCL1YGL011C PAM17P36147 197 aa2.09□□□□□ -2.07
SCL1YGL011C SHG1P38337 142 aa2.09□□□□□ -2.07
SCL1YGL011C EGD2P38879 174 aaKnown RBP2.09□□□□□ -2.07
SCL1YGL011C VMA7P39111 118 aa2.09□□□□□ -2.07
SCL1YGL011C CIN5P40917 295 aa2.09□□□□□ -2.07
SCL1YGL011C YMR315WQ04869 349 aaKnown RBP2.09□□□□□ -2.07
SCL1YGL011C RNH202Q05635 350 aa2.09□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 24.8 ms