RNA–Protein interactions for RNA: YFR050C

PRE4, Transcript of Beta 7 subunit of the 20S proteasome, yeastyeast

Gene PRE4, Length 801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE4YFR050C HPT1Q04178 221 aaKnown RBP1.03□□□□□ -2.24
PRE4YFR050C RRG8Q06109 277 aa1.03□□□□□ -2.24
PRE4YFR050C GPN3Q06543 272 aa1.03□□□□□ -2.24
PRE4YFR050C HEM25Q07534 307 aa1.03□□□□□ -2.24
PRE4YFR050C MSH5Q12175 901 aa1.03□□□□□ -2.24
PRE4YFR050C YLL066W-BQ8TGJ7 56 aa1.03□□□□□ -2.24
PRE4YFR050C RPL26AP05743 127 aaKnown RBP1.02□□□□□ -2.25
PRE4YFR050C CSM1P25651 190 aa1.02□□□□□ -2.25
PRE4YFR050C YCR090CP25654 182 aaKnown RBP1.02□□□□□ -2.25
PRE4YFR050C YKR045CP36138 183 aa1.02□□□□□ -2.25
PRE4YFR050C MNN9P39107 395 aaKnown RBP1.02□□□□□ -2.25
PRE4YFR050C GCN20P43535 752 aaKnown RBP1.02□□□□□ -2.25
PRE4YFR050C TTI2P47168 421 aa1.02□□□□□ -2.25
PRE4YFR050C OST3P48439 350 aa1.02□□□□□ -2.25
PRE4YFR050C RPL26BP53221 127 aaKnown RBP1.02□□□□□ -2.25
PRE4YFR050C YGR219WP53307 113 aa1.02□□□□□ -2.25
PRE4YFR050C TOM7P53507 60 aa1.02□□□□□ -2.25
PRE4YFR050C FYV6P53913 173 aa1.02□□□□□ -2.25
PRE4YFR050C YDR476CQ03362 224 aa1.02□□□□□ -2.25
PRE4YFR050C BER1Q06688 274 aaKnown RBP1.02□□□□□ -2.25
PRE4YFR050C IRC23Q08416 157 aa1.02□□□□□ -2.25
PRE4YFR050C AGC1Q12482 902 aa1.02□□□□□ -2.25
PRE4YFR050C ATP6P00854 259 aa1.01□□□□□ -2.25
PRE4YFR050C TIR1P10863 254 aa1.01□□□□□ -2.25
PRE4YFR050C SPO13P23624 291 aa1.01□□□□□ -2.25
PRE4YFR050C SLM2P53955 656 aa1.01□□□□□ -2.25
PRE4YFR050C FCF1Q05498 189 aaPredicted RBP1.01□□□□□ -2.25
PRE4YFR050C YLR173WQ06247 608 aa1.01□□□□□ -2.25
PRE4YFR050C PET494P07390 489 aaPredicted RBP1□□□□□ -2.25
PRE4YFR050C ATG22P25568 528 aa1□□□□□ -2.25
PRE4YFR050C JEN1P36035 616 aa1□□□□□ -2.25
PRE4YFR050C MIC12P38341 106 aa1□□□□□ -2.25
PRE4YFR050C YJR146WP47174 117 aa1□□□□□ -2.25
PRE4YFR050C DAN1P47178 298 aa1□□□□□ -2.25
PRE4YFR050C RPL9BP51401 191 aaKnown RBP1□□□□□ -2.25
PRE4YFR050C ERG25P53045 309 aa1□□□□□ -2.25
PRE4YFR050C NIF3P53081 288 aa1□□□□□ -2.25
PRE4YFR050C FMP41P53889 259 aaKnown RBP1□□□□□ -2.25
PRE4YFR050C YPR127WQ06494 345 aa1□□□□□ -2.25
PRE4YFR050C DPM1P14020 267 aaKnown RBP0.99□□□□□ -2.25
PRE4YFR050C RGI1P40043 161 aaPredicted RBP0.99□□□□□ -2.25
PRE4YFR050C CPD1P53314 239 aa0.99□□□□□ -2.25
PRE4YFR050C HHT1P61830 136 aa0.99□□□□□ -2.25
PRE4YFR050C YMR114CQ04471 368 aaKnown RBP0.99□□□□□ -2.25
PRE4YFR050C YHR086W-AQ3E746 53 aa0.99□□□□□ -2.25
PRE4YFR050C YBL112CQ3E7Y4 105 aa0.99□□□□□ -2.25
PRE4YFR050C PUT1P09368 476 aa0.98□□□□□ -2.25
PRE4YFR050C PEX3P28795 441 aa0.98□□□□□ -2.25
PRE4YFR050C YGL235WP53071 178 aa0.98□□□□□ -2.25
PRE4YFR050C PNC1P53184 216 aaKnown RBP0.98□□□□□ -2.25
PRE4YFR050C LPP1Q04396 274 aa0.98□□□□□ -2.25
PRE4YFR050C RFU1Q08003 200 aa0.98□□□□□ -2.25
PRE4YFR050C YOR268CQ08734 132 aa0.98□□□□□ -2.25
PRE4YFR050C MPD1Q12404 318 aaKnown RBP0.98□□□□□ -2.25
PRE4YFR050C EMC6Q12431 108 aa0.98□□□□□ -2.25
PRE4YFR050C KRR1P25586 316 aaPredicted RBP0.97□□□□□ -2.25
PRE4YFR050C RNP1P32385 249 aa0.97□□□□□ -2.25
PRE4YFR050C LHP1P33399 275 aaKnown RBP0.97□□□□□ -2.25
PRE4YFR050C MRPL38P35996 138 aaPredicted RBP0.97□□□□□ -2.25
PRE4YFR050C TAD2P47058 250 aa0.97□□□□□ -2.25
PRE4YFR050C TIM21P53220 239 aa0.97□□□□□ -2.25
PRE4YFR050C SLX9P53251 210 aaPredicted RBP0.97□□□□□ -2.25
PRE4YFR050C YNL010WP53981 241 aaKnown RBP0.97□□□□□ -2.25
PRE4YFR050C SPO19Q03029 223 aa0.97□□□□□ -2.25
PRE4YFR050C SFH1Q06168 426 aa0.97□□□□□ -2.25
PRE4YFR050C YOR289WQ12012 251 aaPredicted RBP0.97□□□□□ -2.25
PRE4YFR050C SMT3Q12306 101 aaKnown RBP0.97□□□□□ -2.25
PRE4YFR050C RRT15Q3E811 62 aa0.97□□□□□ -2.25
PRE4YFR050C DDP1Q99321 188 aaKnown RBP0.97□□□□□ -2.25
PRE4YFR050C GPA2P10823 449 aa0.96□□□□□ -2.26
PRE4YFR050C MEK1P24719 497 aaPredicted RBP0.96□□□□□ -2.26
PRE4YFR050C OAC1P32332 324 aa0.96□□□□□ -2.26
PRE4YFR050C CPR5P35176 225 aa0.96□□□□□ -2.26
PRE4YFR050C TEM1P38987 245 aa0.96□□□□□ -2.26
PRE4YFR050C PGD1P40356 397 aa0.96□□□□□ -2.26
PRE4YFR050C LOC1P43586 204 aaPredicted RBP0.96□□□□□ -2.26
PRE4YFR050C MRX5P47007 382 aa0.96□□□□□ -2.26
PRE4YFR050C YJL118WP47022 219 aa0.96□□□□□ -2.26
PRE4YFR050C YJL028WP47062 111 aa0.96□□□□□ -2.26
PRE4YFR050C NUP49Q02199 472 aa0.96□□□□□ -2.26
PRE4YFR050C BCP1Q06338 283 aa0.96□□□□□ -2.26
PRE4YFR050C SYC1Q08553 188 aaPredicted RBP0.96□□□□□ -2.26
PRE4YFR050C ADH3P07246 375 aaKnown RBP0.95□□□□□ -2.26
PRE4YFR050C RPC40P07703 335 aaKnown RBP0.95□□□□□ -2.26
PRE4YFR050C MRP1P10662 321 aaKnown RBP0.95□□□□□ -2.26
PRE4YFR050C MER1P16523 270 aa0.95□□□□□ -2.26
PRE4YFR050C STE18P18852 110 aa0.95□□□□□ -2.26
PRE4YFR050C IDH1P28834 360 aaKnown RBP RIP-Chip data0.95□□□□□ -2.26not detected
PRE4YFR050C RFC2P40348 353 aa0.95□□□□□ -2.26
PRE4YFR050C AIM36Q03798 255 aa0.95□□□□□ -2.26
PRE4YFR050C VBA1Q04301 562 aa0.95□□□□□ -2.26
PRE4YFR050C YOL131WQ08270 108 aa0.95□□□□□ -2.26
PRE4YFR050C NOT5Q12514 560 aaPredicted RBP0.95□□□□□ -2.26
PRE4YFR050C RIB3Q99258 208 aa0.95□□□□□ -2.26
PRE4YFR050C YGL185CP53100 379 aa0.94□□□□□ -2.26
PRE4YFR050C GTR2P53290 341 aa0.94□□□□□ -2.26
PRE4YFR050C LOA1Q06508 300 aa0.94□□□□□ -2.26
PRE4YFR050C CTR3Q06686 241 aa0.94□□□□□ -2.26
PRE4YFR050C YLR413WQ06689 675 aa0.94□□□□□ -2.26
PRE4YFR050C SNF8Q12483 233 aa0.94□□□□□ -2.26
Retrieved 100 of 5,963 RNA–protein pairs in 22.8 ms