RNA–Protein interactions for RNA: YEL003W

GIM4, Transcript of Subunit of the heterohexameric cochaperone prefoldin complex, yeastyeast

Gene GIM4, Length 336 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GIM4YEL003W THP2O13539 261 aaKnown RBP-1.35□□□□□ -2.63
GIM4YEL003W RPS22AP0C0W1 130 aaKnown RBP-1.35□□□□□ -2.63
GIM4YEL003W YUH1P35127 236 aa-1.35□□□□□ -2.63
GIM4YEL003W TRM5P38793 499 aa-1.35□□□□□ -2.63
GIM4YEL003W ADO1P47143 340 aaKnown RBP-1.35□□□□□ -2.63
GIM4YEL003W YOR342CQ12182 319 aa-1.35□□□□□ -2.63
GIM4YEL003W RPS22BQ3E7Y3 130 aaKnown RBP-1.35□□□□□ -2.63
GIM4YEL003W VMA6P32366 345 aaKnown RBP-1.36□□□□□ -2.63
GIM4YEL003W LAA1P39526 2014 aa-1.36□□□□□ -2.63
GIM4YEL003W IRC18P47056 224 aa-1.36□□□□□ -2.63
GIM4YEL003W HRD1Q08109 551 aa-1.36□□□□□ -2.63
GIM4YEL003W URA2P07259 2214 aaKnown RBP-1.37□□□□□ -2.63
GIM4YEL003W MAK31P23059 88 aa-1.37□□□□□ -2.63
GIM4YEL003W SPS18P32572 300 aa-1.37□□□□□ -2.63
GIM4YEL003W YOR072WQ08486 104 aa-1.37□□□□□ -2.63
GIM4YEL003W ATG41Q12048 136 aa-1.37□□□□□ -2.63
GIM4YEL003W MBF1O14467 151 aaKnown RBP-1.38□□□□□ -2.63
GIM4YEL003W TAF14P35189 244 aa-1.38□□□□□ -2.63
GIM4YEL003W PET117Q02771 107 aa-1.38□□□□□ -2.63
GIM4YEL003W DML1Q03652 475 aa-1.38□□□□□ -2.63
GIM4YEL003W FUS2Q05670 677 aa-1.38□□□□□ -2.63
GIM4YEL003W DAS2Q12084 232 aa-1.39□□□□□ -2.63
GIM4YEL003W YOR034C-AQ3E735 80 aa-1.39□□□□□ -2.63
GIM4YEL003W YDR157WA0A023PZE8 133 aa-1.4□□□□□ -2.63
GIM4YEL003W NTG1P31378 399 aa-1.4□□□□□ -2.63
GIM4YEL003W RTC3P38804 111 aaPredicted RBP-1.4□□□□□ -2.63
GIM4YEL003W ATP20Q12233 115 aa-1.4□□□□□ -2.63
GIM4YEL003W YKL183C-AQ3E765 70 aa-1.4□□□□□ -2.63
GIM4YEL003W YFL019CP43576 117 aa-1.41□□□□□ -2.64
GIM4YEL003W HAP2P06774 265 aa-1.42□□□□□ -2.64
GIM4YEL003W YBR121C-AP0C5L4 52 aa-1.42□□□□□ -2.64
GIM4YEL003W DDR48P18899 430 aaKnown RBP-1.42□□□□□ -2.64
GIM4YEL003W YCR087C-AP37263 153 aa-1.42□□□□□ -2.64
GIM4YEL003W HTD2P38790 280 aaKnown RBP-1.42□□□□□ -2.64
GIM4YEL003W RFC4P40339 323 aaKnown RBP-1.42□□□□□ -2.64
GIM4YEL003W CCC1P47818 322 aa-1.42□□□□□ -2.64
GIM4YEL003W SBH1P52870 82 aa-1.42□□□□□ -2.64
GIM4YEL003W YLR036CQ07986 203 aa-1.42□□□□□ -2.64
GIM4YEL003W BNI1P41832 1953 aa-1.43□□□□□ -2.64
GIM4YEL003W STE18P18852 110 aa-1.43□□□□□ -2.64
GIM4YEL003W RRT1P38192 103 aa-1.43□□□□□ -2.64
GIM4YEL003W YBR027CP38220 110 aa-1.43□□□□□ -2.64
GIM4YEL003W RPL24BP24000 155 aaKnown RBP-1.44□□□□□ -2.64
GIM4YEL003W YHR140WP38842 239 aa-1.45□□□□□ -2.64
GIM4YEL003W NSA2P40078 261 aaKnown RBP-1.45□□□□□ -2.64
GIM4YEL003W YNL194CP40169 301 aa-1.45□□□□□ -2.64
GIM4YEL003W TDA4P47153 279 aa-1.45□□□□□ -2.64
GIM4YEL003W RIM9Q04734 239 aa-1.45□□□□□ -2.64
GIM4YEL003W VAM10Q08474 114 aa-1.45□□□□□ -2.64
GIM4YEL003W ADE1P27616 306 aa-1.46□□□□□ -2.64
GIM4YEL003W YMR315WQ04869 349 aaKnown RBP-1.46□□□□□ -2.64
GIM4YEL003W RFC2P40348 353 aa-1.47□□□□□ -2.64
GIM4YEL003W GSC2P40989 1895 aa-1.48□□□□□ -2.65
GIM4YEL003W YLR031WQ07978 186 aa-1.48□□□□□ -2.65
GIM4YEL003W PRP18P33411 251 aaPredicted RBP-1.49□□□□□ -2.65
GIM4YEL003W CBT1P36038 271 aaPredicted RBP-1.49□□□□□ -2.65
GIM4YEL003W APS3P47064 194 aa-1.49□□□□□ -2.65
GIM4YEL003W YOR381W-AQ3E804 55 aa-1.49□□□□□ -2.65
GIM4YEL003W RPS24AP0CX31 135 aaKnown RBP-1.5□□□□□ -2.65
GIM4YEL003W RPS24BP0CX32 135 aaKnown RBP-1.5□□□□□ -2.65
GIM4YEL003W YER085CP40058 173 aa-1.5□□□□□ -2.65
GIM4YEL003W GAL83Q04739 417 aa-1.5□□□□□ -2.65
GIM4YEL003W RNH1Q04740 348 aa-1.5□□□□□ -2.65
GIM4YEL003W TAF2P23255 1407 aa-1.5□□□□□ -2.65
GIM4YEL003W YRA2P36036 203 aaKnown RBP RIP-Chip data-1.51□□□□□ -2.65not detected
GIM4YEL003W RAD17P48581 401 aa-1.51□□□□□ -2.65
GIM4YEL003W YDL157CQ12082 118 aa-1.51□□□□□ -2.65
GIM4YEL003W MRS1P07266 363 aa-1.52□□□□□ -2.65
GIM4YEL003W NRK1P53915 240 aa-1.52□□□□□ -2.65
GIM4YEL003W GRX5Q02784 150 aa-1.52□□□□□ -2.65
GIM4YEL003W CDC39P25655 2108 aaKnown RBP-1.52□□□□□ -2.65
GIM4YEL003W FMP23P38231 175 aa-1.53□□□□□ -2.65
GIM4YEL003W RTR1P40084 226 aaPredicted RBP-1.53□□□□□ -2.65
GIM4YEL003W CWC23P52868 283 aaPredicted RBP-1.53□□□□□ -2.65
GIM4YEL003W GPI17Q04080 534 aa-1.53□□□□□ -2.65
GIM4YEL003W GCY1P14065 312 aaKnown RBP RIP-Chip data-1.54□□□□□ -2.66not detected
GIM4YEL003W YRB1P41920 201 aaKnown RBP-1.55□□□□□ -2.66
GIM4YEL003W RUD3Q12234 484 aaKnown RBP-1.56□□□□□ -2.66
GIM4YEL003W YLR412C-AQ3E742 68 aa-1.56□□□□□ -2.66
GIM4YEL003W NHP6BP11633 99 aaKnown RBP-1.57□□□□□ -2.66
GIM4YEL003W HSP30P25619 332 aa-1.57□□□□□ -2.66
GIM4YEL003W CPR5P35176 225 aa-1.57□□□□□ -2.66
GIM4YEL003W NSG1P38837 291 aa-1.57□□□□□ -2.66
GIM4YEL003W IKI1P38874 309 aa-1.57□□□□□ -2.66
GIM4YEL003W YGR269WP40326 108 aa-1.57□□□□□ -2.66
GIM4YEL003W TMA22P47089 198 aaPredicted RBP-1.57□□□□□ -2.66
GIM4YEL003W GEP7P53171 287 aa-1.57□□□□□ -2.66
GIM4YEL003W YPR127WQ06494 345 aa-1.57□□□□□ -2.66
GIM4YEL003W RPS25BP0C0T4 108 aaKnown RBP-1.58□□□□□ -2.66
GIM4YEL003W ATG8P38182 117 aaRIP-Chip data-1.58□□□□□ -2.66not detected
GIM4YEL003W FMN1Q03778 218 aa-1.58□□□□□ -2.66
GIM4YEL003W YMR321CQ04898 105 aa-1.58□□□□□ -2.66
GIM4YEL003W RPS25AQ3E792 108 aaPredicted RBP-1.58□□□□□ -2.66
GIM4YEL003W CMC4Q3E7A9 73 aa-1.58□□□□□ -2.66
GIM4YEL003W FAS2P19097 1887 aaKnown RBP-1.58□□□□□ -2.66
GIM4YEL003W YNL184CP53876 108 aa-1.59□□□□□ -2.66
GIM4YEL003W CDC33P07260 213 aaKnown RBP-1.6□□□□□ -2.67
GIM4YEL003W SPT14P32363 452 aa-1.6□□□□□ -2.67
GIM4YEL003W MVB12P42939 101 aa-1.6□□□□□ -2.67
GIM4YEL003W SOL1P50278 321 aa-1.6□□□□□ -2.67
Retrieved 100 of 5,963 RNA–protein pairs in 16.1 ms