RNA–Protein interactions for RNA: YDR312W

SSF2, Transcript of Protein required for ribosomal large subunit maturation, yeastyeast

Gene SSF2, Length 1,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSF2YDR312W ERV29P53337 310 aa1.58□□□□□ -2.16
SSF2YDR312W MRPS17Q03246 237 aaPredicted RBP1.58□□□□□ -2.16
SSF2YDR312W YDR248CQ03786 193 aa1.58□□□□□ -2.16
SSF2YDR312W NEJ1Q06148 342 aa1.58□□□□□ -2.16
SSF2YDR312W YKL183C-AQ3E765 70 aa1.58□□□□□ -2.16
SSF2YDR312W BOL1Q3E793 110 aa1.58□□□□□ -2.16
SSF2YDR312W YGR035W-AQ45U48 73 aa1.58□□□□□ -2.16
SSF2YDR312W APS1P35181 156 aa1.57□□□□□ -2.16
SSF2YDR312W FES1P38260 290 aa1.57□□□□□ -2.16
SSF2YDR312W RTC3P38804 111 aaPredicted RBP1.57□□□□□ -2.16
SSF2YDR312W YIL001WP40560 513 aa1.57□□□□□ -2.16
SSF2YDR312W SMD3P43321 101 aaKnown RBP1.57□□□□□ -2.16
SSF2YDR312W ERG25P53045 309 aa1.57□□□□□ -2.16
SSF2YDR312W BOL2P53082 120 aa1.57□□□□□ -2.16
SSF2YDR312W YDR249CQ03787 373 aa1.57□□□□□ -2.16
SSF2YDR312W MEU1Q07938 337 aaKnown RBP RIP-Chip data1.57□□□□□ -2.16not detected
SSF2YDR312W CSI2Q08054 341 aa1.57□□□□□ -2.16
SSF2YDR312W UIP4Q08926 304 aa1.57□□□□□ -2.16
SSF2YDR312W PSF1Q12488 208 aa1.57□□□□□ -2.16
SSF2YDR312W YPL229WQ99395 206 aa1.57□□□□□ -2.16
SSF2YDR312W QCR6P00127 147 aa1.56□□□□□ -2.16
SSF2YDR312W CDC8P00572 216 aa1.56□□□□□ -2.16
SSF2YDR312W RAD51P25454 400 aa1.56□□□□□ -2.16
SSF2YDR312W ATG22P25568 528 aa1.56□□□□□ -2.16
SSF2YDR312W PEX4P29340 183 aa1.56□□□□□ -2.16
SSF2YDR312W VPS51P36116 164 aa1.56□□□□□ -2.16
SSF2YDR312W SKG1P36169 355 aa1.56□□□□□ -2.16
SSF2YDR312W MRPL28P36527 147 aa1.56□□□□□ -2.16
SSF2YDR312W POP4P38336 279 aa1.56□□□□□ -2.16
SSF2YDR312W TRM5P38793 499 aa1.56□□□□□ -2.16
SSF2YDR312W CTR2P38865 189 aa1.56□□□□□ -2.16
SSF2YDR312W SVP26P38869 228 aa1.56□□□□□ -2.16
SSF2YDR312W YER034WP40022 185 aaKnown RBP1.56□□□□□ -2.16
SSF2YDR312W ERG28P40030 148 aa1.56□□□□□ -2.16
SSF2YDR312W YKE4P40544 346 aa1.56□□□□□ -2.16
SSF2YDR312W PDR17P53844 350 aa1.56□□□□□ -2.16
SSF2YDR312W SED1Q01589 338 aa1.56□□□□□ -2.16
SSF2YDR312W LPP1Q04396 274 aa1.56□□□□□ -2.16
SSF2YDR312W ARR2Q06597 130 aa1.56□□□□□ -2.16
SSF2YDR312W ADF1Q2V2Q1 113 aa1.56□□□□□ -2.16
SSF2YDR312W CDC28P00546 298 aaKnown RBP1.55□□□□□ -2.16
SSF2YDR312W YHR032W-AP0C5N6 59 aa1.55□□□□□ -2.16
SSF2YDR312W GCN3P14741 305 aa1.55□□□□□ -2.16
SSF2YDR312W PTM1P32857 523 aa1.55□□□□□ -2.16
SSF2YDR312W SRY1P36007 326 aa1.55□□□□□ -2.16
SSF2YDR312W NRG2P38082 220 aa1.55□□□□□ -2.16
SSF2YDR312W IKI1P38874 309 aa1.55□□□□□ -2.16
SSF2YDR312W IRC22P40006 225 aa1.55□□□□□ -2.16
SSF2YDR312W YER121WP40076 114 aa1.55□□□□□ -2.16
SSF2YDR312W YDL180WQ12301 547 aa1.55□□□□□ -2.16
SSF2YDR312W REP2P03872 296 aa1.54□□□□□ -2.16
SSF2YDR312W ARG80P07249 177 aa1.54□□□□□ -2.16
SSF2YDR312W RPL35AP0CX84 120 aaKnown RBP1.54□□□□□ -2.16
SSF2YDR312W RPL35BP0CX85 120 aaKnown RBP1.54□□□□□ -2.16
SSF2YDR312W MAG1P22134 296 aaKnown RBP1.54□□□□□ -2.16
SSF2YDR312W IDH1P28834 360 aaKnown RBP RIP-Chip data1.54□□□□□ -2.16not detected
SSF2YDR312W OAC1P32332 324 aa1.54□□□□□ -2.16
SSF2YDR312W TCA17P32613 152 aa1.54□□□□□ -2.16
SSF2YDR312W CBT1P36038 271 aaPredicted RBP1.54□□□□□ -2.16
SSF2YDR312W ERV15P38312 142 aa1.54□□□□□ -2.16
SSF2YDR312W YNL194CP40169 301 aa1.54□□□□□ -2.16
SSF2YDR312W RFC4P40339 323 aaKnown RBP1.54□□□□□ -2.16
SSF2YDR312W ADO1P47143 340 aaKnown RBP1.54□□□□□ -2.16
SSF2YDR312W CUS2P53830 285 aaPredicted RBP1.54□□□□□ -2.16
SSF2YDR312W NCE101Q02820 53 aa1.54□□□□□ -2.16
SSF2YDR312W ATO3Q12359 275 aa1.54□□□□□ -2.16
SSF2YDR312W SEC4P07560 215 aaKnown RBP1.53□□□□□ -2.16
SSF2YDR312W YPR170W-BP0C5R9 85 aa1.53□□□□□ -2.16
SSF2YDR312W MRPS28P21771 286 aa1.53□□□□□ -2.16
SSF2YDR312W SNC2P33328 115 aa1.53□□□□□ -2.16
SSF2YDR312W FIG1P38224 298 aa1.53□□□□□ -2.16
SSF2YDR312W PGD1P40356 397 aa1.53□□□□□ -2.16
SSF2YDR312W YFR054CP43622 192 aa1.53□□□□□ -2.16
SSF2YDR312W SIP18P50263 79 aa1.53□□□□□ -2.16
SSF2YDR312W CWC23P52868 283 aaPredicted RBP1.53□□□□□ -2.16
SSF2YDR312W ALG13P53178 202 aa1.53□□□□□ -2.16
SSF2YDR312W SNZ1Q03148 297 aa1.53□□□□□ -2.16
SSF2YDR312W NHP10Q03435 203 aa1.53□□□□□ -2.16
SSF2YDR312W RCE1Q03530 315 aa1.53□□□□□ -2.16
SSF2YDR312W MRPS8Q03799 155 aa1.53□□□□□ -2.16
SSF2YDR312W TSC3Q3E790 80 aa1.53□□□□□ -2.16
SSF2YDR312W SLH1P53327 1967 aaKnown RBP1.53□□□□□ -2.17
SSF2YDR312W RPL25P04456 142 aaKnown RBP1.52□□□□□ -2.17
SSF2YDR312W URA5P13298 226 aaKnown RBP1.52□□□□□ -2.17
SSF2YDR312W APA2P22108 325 aa1.52□□□□□ -2.17
SSF2YDR312W YCR087C-AP37263 153 aa1.52□□□□□ -2.17
SSF2YDR312W UMP1P38293 148 aa1.52□□□□□ -2.17
SSF2YDR312W NSG1P38837 291 aa1.52□□□□□ -2.17
SSF2YDR312W YHR180WP38868 163 aa1.52□□□□□ -2.17
SSF2YDR312W RMD6P39975 231 aa1.52□□□□□ -2.17
SSF2YDR312W HYR1P40581 163 aaKnown RBP1.52□□□□□ -2.17
SSF2YDR312W GLR1P41921 483 aaKnown RBP1.52□□□□□ -2.17
SSF2YDR312W DAN1P47178 298 aa1.52□□□□□ -2.17
SSF2YDR312W GET1P53192 235 aa1.52□□□□□ -2.17
SSF2YDR312W SWP1Q02795 286 aa1.52□□□□□ -2.17
SSF2YDR312W GRE1Q08969 168 aa1.52□□□□□ -2.17
SSF2YDR312W GET4Q12125 312 aa1.52□□□□□ -2.17
SSF2YDR312W YCL048W-AQ2V2Q2 79 aa1.52□□□□□ -2.17
SSF2YDR312W YDR157WA0A023PZE8 133 aa1.51□□□□□ -2.17
SSF2YDR312W YHR139C-AO13536 103 aa1.51□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 23.1 ms