RNA–Protein interactions for RNA: YDR085C

AFR1, Transcript of Protein required for pheromone-induced projection (shmoo) formation, yeastyeast

Gene AFR1, Length 1,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AFR1YDR085C FIT1Q04433 528 aa0.56□□□□□ -2.32
AFR1YDR085C FYV12Q08559 129 aa0.56□□□□□ -2.32
AFR1YDR085C DUR1,2P32528 1835 aaKnown RBP0.56□□□□□ -2.32
AFR1YDR085C FMP49A0A023PZB3 126 aa0.56□□□□□ -2.32
AFR1YDR085C QCR7P00128 127 aa0.56□□□□□ -2.32
AFR1YDR085C YBL010CP32788 280 aa0.56□□□□□ -2.32
AFR1YDR085C TMA22P47089 198 aaPredicted RBP0.56□□□□□ -2.32
AFR1YDR085C ATP20Q12233 115 aa0.56□□□□□ -2.32
AFR1YDR085C RPS24AP0CX31 135 aaKnown RBP0.55□□□□□ -2.32
AFR1YDR085C RPS24BP0CX32 135 aaKnown RBP0.55□□□□□ -2.32
AFR1YDR085C YIL102CP40488 101 aa0.55□□□□□ -2.32
AFR1YDR085C PIR1Q03178 341 aa0.55□□□□□ -2.32
AFR1YDR085C DAS2Q12084 232 aa0.55□□□□□ -2.32
AFR1YDR085C RPB4P20433 221 aaPredicted RBP0.54□□□□□ -2.32
AFR1YDR085C UPS1Q05776 175 aa0.54□□□□□ -2.32
AFR1YDR085C YOR342CQ12182 319 aa0.54□□□□□ -2.32
AFR1YDR085C NSA2P40078 261 aaKnown RBP0.54□□□□□ -2.32
AFR1YDR085C DCV1P43595 202 aa0.54□□□□□ -2.32
AFR1YDR085C YHP1Q04116 353 aa0.54□□□□□ -2.32
AFR1YDR085C YLR412C-AQ3E742 68 aa0.54□□□□□ -2.32
AFR1YDR085C NTG1P31378 399 aa0.53□□□□□ -2.32
AFR1YDR085C NSG1P38837 291 aa0.53□□□□□ -2.32
AFR1YDR085C YAR064WP39563 99 aa0.53□□□□□ -2.32
AFR1YDR085C NSE4P43124 402 aa0.53□□□□□ -2.32
AFR1YDR085C SBH2P52871 88 aa0.53□□□□□ -2.32
AFR1YDR085C NRK1P53915 240 aa0.53□□□□□ -2.32
AFR1YDR085C TIM11P81449 96 aaPredicted RBP0.53□□□□□ -2.32
AFR1YDR085C ELP6Q04868 273 aa0.53□□□□□ -2.32
AFR1YDR085C YOL024WQ08172 172 aa0.53□□□□□ -2.32
AFR1YDR085C RRT1P38192 103 aa0.52□□□□□ -2.33
AFR1YDR085C PGA1P53896 198 aa0.52□□□□□ -2.33
AFR1YDR085C ADE1P27616 306 aa0.52□□□□□ -2.33
AFR1YDR085C SBH1P52870 82 aa0.52□□□□□ -2.33
AFR1YDR085C RTC4P53850 401 aa0.52□□□□□ -2.33
AFR1YDR085C DML1Q03652 475 aa0.52□□□□□ -2.33
AFR1YDR085C DGK1Q12382 290 aa0.52□□□□□ -2.33
AFR1YDR085C YMR030W-AQ3E760 96 aa0.52□□□□□ -2.33
AFR1YDR085C MAK31P23059 88 aa0.51□□□□□ -2.33
AFR1YDR085C YKT6P36015 200 aaKnown RBP0.5□□□□□ -2.33
AFR1YDR085C ATG41Q12048 136 aa0.5□□□□□ -2.33
AFR1YDR085C PRP8P33334 2413 aaKnown RBP0.5□□□□□ -2.33
AFR1YDR085C CCS1P40202 249 aaKnown RBP0.5□□□□□ -2.33
AFR1YDR085C GAL83Q04739 417 aa0.5□□□□□ -2.33
AFR1YDR085C YDL085C-AQ3E7B7 68 aaKnown RBP0.5□□□□□ -2.33
AFR1YDR085C YPR014CQ6B0W2 109 aa0.5□□□□□ -2.33
AFR1YDR085C JIP3O13555 125 aa0.49□□□□□ -2.33
AFR1YDR085C TAH1P25638 111 aaPredicted RBP0.48□□□□□ -2.33
AFR1YDR085C YJR015WP47090 510 aa0.48□□□□□ -2.33
AFR1YDR085C YOR381W-AQ3E804 55 aa0.48□□□□□ -2.33
AFR1YDR085C YKR070WP36151 352 aaKnown RBP0.48□□□□□ -2.33
AFR1YDR085C AIM34Q03673 198 aa0.48□□□□□ -2.33
AFR1YDR085C NOC4Q06512 552 aaPredicted RBP0.48□□□□□ -2.33
AFR1YDR085C MPD1Q12404 318 aaKnown RBP0.48□□□□□ -2.33
AFR1YDR085C TRX3P25372 127 aa0.46□□□□□ -2.34
AFR1YDR085C SHB17P36136 271 aaKnown RBP0.46□□□□□ -2.34
AFR1YDR085C GRX5Q02784 150 aa0.46□□□□□ -2.34
AFR1YDR085C YDC1Q02896 317 aa0.46□□□□□ -2.34
AFR1YDR085C RIM9Q04734 239 aa0.46□□□□□ -2.34
AFR1YDR085C YRA2P36036 203 aaKnown RBP RIP-Chip data0.46□□□□□ -2.34not detected
AFR1YDR085C KEI1Q06346 221 aa0.46□□□□□ -2.34
AFR1YDR085C HSP30P25619 332 aa0.45□□□□□ -2.34
AFR1YDR085C AHC2P25649 128 aa0.45□□□□□ -2.34
AFR1YDR085C FYV4P38783 130 aaPredicted RBP0.45□□□□□ -2.34
AFR1YDR085C HHT1P61830 136 aa0.45□□□□□ -2.34
AFR1YDR085C HFA1P32874 2273 aa0.44□□□□□ -2.34
AFR1YDR085C YGL230CP53074 147 aa0.44□□□□□ -2.34
AFR1YDR085C TMA23Q03525 211 aa0.44□□□□□ -2.34
AFR1YDR085C AVO2Q04749 426 aa0.44□□□□□ -2.34
AFR1YDR085C CPR5P35176 225 aa0.44□□□□□ -2.34
AFR1YDR085C YNL200CP40165 246 aaKnown RBP0.44□□□□□ -2.34
AFR1YDR085C FMP32P43557 207 aa0.44□□□□□ -2.34
AFR1YDR085C CAF4P36130 643 aa0.43□□□□□ -2.34
AFR1YDR085C CGR1P53188 120 aa0.43□□□□□ -2.34
AFR1YDR085C GRX8Q05926 109 aa0.43□□□□□ -2.34
AFR1YDR085C SHH4Q06236 168 aa0.43□□□□□ -2.34
AFR1YDR085C RAD9P14737 1309 aa0.43□□□□□ -2.34
AFR1YDR085C YOL013W-AP0C272 63 aaPredicted RBP0.42□□□□□ -2.34
AFR1YDR085C SEC14P24280 304 aaKnown RBP0.42□□□□□ -2.34
AFR1YDR085C YCR001WP25347 104 aa0.42□□□□□ -2.34
AFR1YDR085C YKL102CP34249 101 aa0.42□□□□□ -2.34
AFR1YDR085C VPS28Q02767 242 aa0.42□□□□□ -2.34
AFR1YDR085C RFC2P40348 353 aa0.41□□□□□ -2.34
AFR1YDR085C YKR005CQ02203 525 aa0.41□□□□□ -2.34
AFR1YDR085C GPI17Q04080 534 aa0.41□□□□□ -2.34
AFR1YDR085C RIF1P29539 1916 aa0.41□□□□□ -2.34
AFR1YDR085C BRX1Q08235 291 aaKnown RBP0.41□□□□□ -2.34
AFR1YDR085C YOR214CQ12282 236 aa0.41□□□□□ -2.34
AFR1YDR085C GCY1P14065 312 aaKnown RBP RIP-Chip data0.4□□□□□ -2.35not detected
AFR1YDR085C PRE1P22141 198 aaKnown RBP0.4□□□□□ -2.35
AFR1YDR085C YKR041WP36134 250 aa0.4□□□□□ -2.35
AFR1YDR085C POG1P40473 351 aa0.4□□□□□ -2.35
AFR1YDR085C YPR127WQ06494 345 aa0.4□□□□□ -2.35
AFR1YDR085C CWC21Q03375 135 aaKnown RBP0.39□□□□□ -2.35
AFR1YDR085C FCY1Q12178 158 aa0.39□□□□□ -2.35
AFR1YDR085C SHG1P38337 142 aa0.39□□□□□ -2.35
AFR1YDR085C TTI2P47168 421 aa0.39□□□□□ -2.35
AFR1YDR085C PAC10P48363 199 aa0.39□□□□□ -2.35
AFR1YDR085C SED1Q01589 338 aa0.39□□□□□ -2.35
AFR1YDR085C HHY1P39982 102 aa0.38□□□□□ -2.35
AFR1YDR085C MOB1P40484 314 aa0.38□□□□□ -2.35
Retrieved 100 of 5,963 RNA–protein pairs in 22.2 ms