RNA–Protein interactions for RNA: YDL194W

SNF3, Transcript of Plasma membrane low glucose sensor, regulates glucose transport, yeast

Gene SNF3, Length 2,655 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SNF3	YDL194W	OST1	P41543	476 aa	Known RBP	4.25	□□□□□ -1.73
SNF3	YDL194W	PAM16	P42949	149 aa		4.25	□□□□□ -1.73
SNF3	YDL194W	ARP3	P47117	449 aa	Known RBP	4.25	□□□□□ -1.73
SNF3	YDL194W	MRH4	P53166	561 aa		4.25	□□□□□ -1.73
SNF3	YDL194W	TSC3	Q3E790	80 aa		4.25	□□□□□ -1.73
SNF3	YDL194W	ROM2	P51862	1356 aa	Known RBP	4.25	□□□□□ -1.73
SNF3	YDL194W	COQ2	P32378	372 aa		4.25	□□□□□ -1.73
SNF3	YDL194W	YER181C	P40097	107 aa		4.25	□□□□□ -1.73
SNF3	YDL194W	EAF6	P47128	113 aa		4.25	□□□□□ -1.73
SNF3	YDL194W	CCS1	P40202	249 aa	Known RBP	4.24	□□□□□ -1.73
SNF3	YDL194W	YGL034C	P53186	121 aa		4.24	□□□□□ -1.73
SNF3	YDL194W	AAH1	P53909	347 aa		4.24	□□□□□ -1.73
SNF3	YDL194W	BUD25	P85052	153 aa		4.24	□□□□□ -1.73
SNF3	YDL194W	KEI1	Q06346	221 aa		4.24	□□□□□ -1.73
SNF3	YDL194W	YOS1	Q3E834	85 aa		4.24	□□□□□ -1.73
SNF3	YDL194W	MBF1	O14467	151 aa	Known RBP	4.24	□□□□□ -1.73
SNF3	YDL194W	STE4	P18851	423 aa		4.24	□□□□□ -1.73
SNF3	YDL194W	URM1	P40554	99 aa	Predicted RBP	4.24	□□□□□ -1.73
SNF3	YDL194W	CUP9	P41817	306 aa		4.24	□□□□□ -1.73
SNF3	YDL194W	ALG9	P53868	555 aa	Known RBP	4.24	□□□□□ -1.73
SNF3	YDL194W	YNL010W	P53981	241 aa	Known RBP	4.24	□□□□□ -1.73
SNF3	YDL194W	YDR029W	Q12111	104 aa		4.24	□□□□□ -1.73
SNF3	YDL194W	YOR097C	Q12274	175 aa	Predicted RBP	4.24	□□□□□ -1.73
SNF3	YDL194W	ATG15	P25641	520 aa		4.23	□□□□□ -1.73
SNF3	YDL194W	PEX2	P32800	271 aa		4.23	□□□□□ -1.73
SNF3	YDL194W	MRP21	P38175	177 aa		4.23	□□□□□ -1.73
SNF3	YDL194W	YGL088W	P53151	121 aa		4.23	□□□□□ -1.73
SNF3	YDL194W	YNL234W	P53857	426 aa		4.23	□□□□□ -1.73
SNF3	YDL194W	NUP100	Q02629	959 aa		4.23	□□□□□ -1.73
SNF3	YDL194W	GAS3	Q03655	524 aa		4.23	□□□□□ -1.73
SNF3	YDL194W	YOR186W	Q08560	144 aa		4.23	□□□□□ -1.73
SNF3	YDL194W	Q0255	P03881	472 aa		4.23	□□□□□ -1.73
SNF3	YDL194W	YJL213W	P40896	331 aa		4.23	□□□□□ -1.73
SNF3	YDL194W	GEP7	P53171	287 aa		4.23	□□□□□ -1.73
SNF3	YDL194W	YGR050C	P53231	118 aa		4.23	□□□□□ -1.73
SNF3	YDL194W	CLD1	P53264	445 aa		4.23	□□□□□ -1.73
SNF3	YDL194W	SCW10	Q04951	389 aa		4.23	□□□□□ -1.73
SNF3	YDL194W	YML053C	Q04978	212 aa		4.23	□□□□□ -1.73
SNF3	YDL194W	MSA1	Q08471	629 aa		4.23	□□□□□ -1.73
SNF3	YDL194W	SLM3	Q12093	417 aa		4.23	□□□□□ -1.73
SNF3	YDL194W	YHR214C-E	Q8TGK0	99 aa		4.23	□□□□□ -1.73
SNF3	YDL194W	TY1B-GR3	Q12316	1755 aa		4.22	□□□□□ -1.73
SNF3	YDL194W	TY1B-OR	Q92393	1755 aa		4.22	□□□□□ -1.73
SNF3	YDL194W	PCL5	P38794	229 aa		4.22	□□□□□ -1.73
SNF3	YDL194W	PCP1	P53259	346 aa		4.22	□□□□□ -1.73
SNF3	YDL194W	ATG5	Q12380	294 aa		4.22	□□□□□ -1.73
SNF3	YDL194W	CAT8	P39113	1433 aa		4.22	□□□□□ -1.73
SNF3	YDL194W	YHR139C-A	O13536	103 aa		4.22	□□□□□ -1.73
SNF3	YDL194W	MRPL39	P36533	70 aa		4.22	□□□□□ -1.73
SNF3	YDL194W	TES1	P41903	349 aa	Known RBP	4.22	□□□□□ -1.73
SNF3	YDL194W	FIT3	Q08907	204 aa		4.22	□□□□□ -1.73
SNF3	YDL194W	SWM1	Q12379	170 aa		4.22	□□□□□ -1.73
SNF3	YDL194W	PAI3	P01094	68 aa		4.21	□□□□□ -1.73
SNF3	YDL194W	CDC25	P04821	1589 aa		4.21	□□□□□ -1.73
SNF3	YDL194W	CKS1	P20486	150 aa	Known RBP	4.21	□□□□□ -1.73
SNF3	YDL194W	DNF1	P32660	1571 aa		4.21	□□□□□ -1.73
SNF3	YDL194W	GEP4	P38812	185 aa		4.21	□□□□□ -1.73
SNF3	YDL194W	MPM1	P40364	252 aa		4.21	□□□□□ -1.73
SNF3	YDL194W	RSM10	Q03201	203 aa		4.21	□□□□□ -1.73
SNF3	YDL194W	HRT1	Q08273	121 aa		4.21	□□□□□ -1.73
SNF3	YDL194W	CPA1	P07258	411 aa	Known RBP	4.21	□□□□□ -1.74
SNF3	YDL194W	YPR170W-B	P0C5R9	85 aa		4.21	□□□□□ -1.74
SNF3	YDL194W	MRPL11	P36521	249 aa	Predicted RBP	4.21	□□□□□ -1.74
SNF3	YDL194W	RIM2	P38127	377 aa		4.21	□□□□□ -1.74
SNF3	YDL194W	YPL039W	Q03080	316 aa		4.21	□□□□□ -1.74
SNF3	YDL194W	YMR252C	Q04814	134 aa		4.21	□□□□□ -1.74
SNF3	YDL194W	GDB1	Q06625	1536 aa		4.21	□□□□□ -1.74
SNF3	YDL194W	YRF1-3	P0CX14	1859 aa		4.21	□□□□□ -1.74
SNF3	YDL194W	YRF1-7	P0CX15	1859 aa		4.21	□□□□□ -1.74
SNF3	YDL194W	YRF1-6	P53819	1859 aa		4.21	□□□□□ -1.74
SNF3	YDL194W	YLR419W	Q06698	1435 aa	Known RBP	4.2	□□□□□ -1.74
SNF3	YDL194W	TY1B-JR2	P47100	1755 aa	Known RBP	4.2	□□□□□ -1.74
SNF3	YDL194W	TY1B-ER2	Q03619	1755 aa		4.2	□□□□□ -1.74
SNF3	YDL194W	TY1B-MR1	Q04214	1755 aa		4.2	□□□□□ -1.74
SNF3	YDL194W	TY1B-MR2	Q04670	1755 aa	Known RBP	4.2	□□□□□ -1.74
SNF3	YDL194W	TY1B-LR1	Q12088	1755 aa	Known RBP	4.2	□□□□□ -1.74
SNF3	YDL194W	TY1B-NL1	Q12112	1755 aa		4.2	□□□□□ -1.74
SNF3	YDL194W	TY1B-GR1	Q12141	1755 aa		4.2	□□□□□ -1.74
SNF3	YDL194W	TY1B-BL	Q12490	1755 aa		4.2	□□□□□ -1.74
SNF3	YDL194W	HEM4	P06174	275 aa		4.2	□□□□□ -1.74
SNF3	YDL194W	SPS100	P13130	326 aa		4.2	□□□□□ -1.74
SNF3	YDL194W	CHS7	P38843	316 aa		4.2	□□□□□ -1.74
SNF3	YDL194W	YFL065C	P43539	102 aa		4.2	□□□□□ -1.74
SNF3	YDL194W	CSI2	Q08054	341 aa		4.2	□□□□□ -1.74
SNF3	YDL194W	YPR203W	Q08994	102 aa		4.2	□□□□□ -1.74
SNF3	YDL194W	MED11	Q99278	115 aa		4.2	□□□□□ -1.74
SNF3	YDL194W	LDB16	P25587	256 aa		4.2	□□□□□ -1.74
SNF3	YDL194W	VMA11	P32842	164 aa		4.2	□□□□□ -1.74
SNF3	YDL194W	CSE2	P33308	149 aa		4.2	□□□□□ -1.74
SNF3	YDL194W	TMA19	P35691	167 aa	Known RBP	4.2	□□□□□ -1.74
SNF3	YDL194W	CTP1	P38152	299 aa		4.2	□□□□□ -1.74
SNF3	YDL194W	YER134C	P40081	178 aa		4.2	□□□□□ -1.74
SNF3	YDL194W	YIL169C	P40442	995 aa		4.2	□□□□□ -1.74
SNF3	YDL194W	DFG10	P40526	253 aa		4.2	□□□□□ -1.74
SNF3	YDL194W	SMM1	P53720	384 aa	Known RBP	4.2	□□□□□ -1.74
SNF3	YDL194W	RCE1	Q03530	315 aa		4.2	□□□□□ -1.74
SNF3	YDL194W	YPR174C	Q06616	221 aa	Predicted RBP	4.2	□□□□□ -1.74
SNF3	YDL194W	YPL245W	Q12179	454 aa	Known RBP	4.2	□□□□□ -1.74
SNF3	YDL194W	RPP1	P38786	293 aa		4.19	□□□□□ -1.74
SNF3	YDL194W	GGC1	P38988	300 aa		4.19	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 57.8 ms