RNA–Protein interactions for RNA: YDL084W

SUB2, Transcript of Component of the TREX complex required for nuclear mRNA export, yeast

Gene SUB2, Length 1,341 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SUB2	YDL084W	ERG24	P32462	438 aa	Known RBP	5.01	□□□□□ -1.61
SUB2	YDL084W	YFR054C	P43622	192 aa		5.01	□□□□□ -1.61
SUB2	YDL084W	BAT2	P47176	376 aa	Known RBP	5.01	□□□□□ -1.61
SUB2	YDL084W	PUS2	P53167	370 aa		5.01	□□□□□ -1.61
SUB2	YDL084W	HST4	P53688	370 aa		5.01	□□□□□ -1.61
SUB2	YDL084W	ATP23	P53722	227 aa		5.01	□□□□□ -1.61
SUB2	YDL084W	RCR2	Q03446	210 aa	Known RBP	5.01	□□□□□ -1.61
SUB2	YDL084W	IZH2	Q12442	317 aa		5.01	□□□□□ -1.61
SUB2	YDL084W	YDR461C-A	Q2V2P7	80 aa		5.01	□□□□□ -1.61
SUB2	YDL084W	DOP1	Q03921	1698 aa		5.01	□□□□□ -1.61
SUB2	YDL084W	ECM12	O13529	151 aa		5	□□□□□ -1.61
SUB2	YDL084W	RIP1	P08067	215 aa		5	□□□□□ -1.61
SUB2	YDL084W	RPS25B	P0C0T4	108 aa	Known RBP	5	□□□□□ -1.61
SUB2	YDL084W	HSP26	P15992	214 aa	Known RBP RIP-Chip data	5	□□□□□ -1.61	not detected
SUB2	YDL084W	CKS1	P20486	150 aa	Known RBP	5	□□□□□ -1.61
SUB2	YDL084W	LRE1	P25579	583 aa	Known RBP	5	□□□□□ -1.61
SUB2	YDL084W	MIG1	P27705	504 aa		5	□□□□□ -1.61
SUB2	YDL084W	ECM15	P35195	104 aa		5	□□□□□ -1.61
SUB2	YDL084W	YIA6	P40556	373 aa		5	□□□□□ -1.61
SUB2	YDL084W	GPI2	P46961	280 aa		5	□□□□□ -1.61
SUB2	YDL084W	SCW4	P53334	386 aa	Known RBP	5	□□□□□ -1.61
SUB2	YDL084W	TEX1	P53851	422 aa	Known RBP	5	□□□□□ -1.61
SUB2	YDL084W	BET5	Q03630	159 aa		5	□□□□□ -1.61
SUB2	YDL084W	RRG7	Q08774	242 aa	Predicted RBP	5	□□□□□ -1.61
SUB2	YDL084W	YDR029W	Q12111	104 aa		5	□□□□□ -1.61
SUB2	YDL084W	MRH1	Q12117	320 aa	Predicted RBP	5	□□□□□ -1.61
SUB2	YDL084W	YPS3	Q12303	508 aa		5	□□□□□ -1.61
SUB2	YDL084W	SME1	Q12330	94 aa	Predicted RBP	5	□□□□□ -1.61
SUB2	YDL084W	RPS25A	Q3E792	108 aa	Predicted RBP	5	□□□□□ -1.61
SUB2	YDL084W	UBR1	P19812	1950 aa		5	□□□□□ -1.61
SUB2	YDL084W	TY4B-J	P47024	1803 aa		4.99	□□□□□ -1.61
SUB2	YDL084W	RAS2	P01120	322 aa	Known RBP	4.99	□□□□□ -1.61
SUB2	YDL084W	OPI3	P05375	206 aa		4.99	□□□□□ -1.61
SUB2	YDL084W	RPL11A	P0C0W9	174 aa	Known RBP	4.99	□□□□□ -1.61
SUB2	YDL084W	YCR090C	P25654	182 aa	Known RBP	4.99	□□□□□ -1.61
SUB2	YDL084W	SRP21	P32342	167 aa		4.99	□□□□□ -1.61
SUB2	YDL084W	GLC7	P32598	312 aa	Known RBP	4.99	□□□□□ -1.61
SUB2	YDL084W	TRS20	P38334	175 aa		4.99	□□□□□ -1.61
SUB2	YDL084W	ARN2	P38724	620 aa		4.99	□□□□□ -1.61
SUB2	YDL084W	ISC1	P40015	477 aa	Known RBP	4.99	□□□□□ -1.61
SUB2	YDL084W	PAU15	P40585	124 aa		4.99	□□□□□ -1.61
SUB2	YDL084W	BXI1	P48558	297 aa		4.99	□□□□□ -1.61
SUB2	YDL084W	YPL039W	Q03080	316 aa		4.99	□□□□□ -1.61
SUB2	YDL084W	YMR187C	Q03236	431 aa		4.99	□□□□□ -1.61
SUB2	YDL084W	YMR166C	Q03829	368 aa		4.99	□□□□□ -1.61
SUB2	YDL084W	YMR090W	Q04304	227 aa	Known RBP	4.99	□□□□□ -1.61
SUB2	YDL084W	RPS10A	Q08745	105 aa	Predicted RBP	4.99	□□□□□ -1.61
SUB2	YDL084W	RPL11B	Q3E757	174 aa	Predicted RBP	4.99	□□□□□ -1.61
SUB2	YDL084W	ADH1	P00330	348 aa	Known RBP	4.98	□□□□□ -1.61
SUB2	YDL084W	COX1	P00401	534 aa		4.98	□□□□□ -1.61
SUB2	YDL084W	AQY1	P0CD91	305 aa		4.98	□□□□□ -1.61
SUB2	YDL084W	MRS3	P10566	314 aa		4.98	□□□□□ -1.61
SUB2	YDL084W	RPL30	P14120	105 aa	Known RBP	4.98	□□□□□ -1.61
SUB2	YDL084W	RFA2	P26754	273 aa	Known RBP	4.98	□□□□□ -1.61
SUB2	YDL084W	YMC1	P32331	307 aa		4.98	□□□□□ -1.61
SUB2	YDL084W	ZRT3	P34240	503 aa		4.98	□□□□□ -1.61
SUB2	YDL084W	NNK1	P36003	928 aa		4.98	□□□□□ -1.61
SUB2	YDL084W	MST28	P39552	234 aa		4.98	□□□□□ -1.61
SUB2	YDL084W	OST1	P41543	476 aa	Known RBP	4.98	□□□□□ -1.61
SUB2	YDL084W	VHT1	P53241	593 aa		4.98	□□□□□ -1.61
SUB2	YDL084W	NUP100	Q02629	959 aa		4.98	□□□□□ -1.61
SUB2	YDL084W	YPR098C	Q06089	161 aa		4.98	□□□□□ -1.61
SUB2	YDL084W	PRO1	P32264	428 aa		4.97	□□□□□ -1.61
SUB2	YDL084W	YKL102C	P34249	101 aa		4.97	□□□□□ -1.61
SUB2	YDL084W	CCS1	P40202	249 aa	Known RBP	4.97	□□□□□ -1.61
SUB2	YDL084W	YIL029C	P40538	142 aa		4.97	□□□□□ -1.61
SUB2	YDL084W	AIM25	P47140	327 aa		4.97	□□□□□ -1.61
SUB2	YDL084W	MPC1	P53157	130 aa	Known RBP	4.97	□□□□□ -1.61
SUB2	YDL084W	RIM8	P53179	542 aa		4.97	□□□□□ -1.61
SUB2	YDL084W	LSM7	P53905	115 aa	Known RBP	4.97	□□□□□ -1.61
SUB2	YDL084W	LEE1	Q02799	301 aa	Known RBP	4.97	□□□□□ -1.61
SUB2	YDL084W	AVO2	Q04749	426 aa		4.97	□□□□□ -1.61
SUB2	YDL084W	YPR174C	Q06616	221 aa	Predicted RBP	4.97	□□□□□ -1.61
SUB2	YDL084W	DGA1	Q08650	418 aa		4.97	□□□□□ -1.61
SUB2	YDL084W	RFM1	Q12192	310 aa		4.97	□□□□□ -1.61
SUB2	YDL084W	RNH203	Q12338	110 aa		4.97	□□□□□ -1.61
SUB2	YDL084W	YBL112C	Q3E7Y4	105 aa		4.97	□□□□□ -1.61
SUB2	YDL084W	CYC1	P00044	109 aa	Predicted RBP	4.97	□□□□□ -1.61
SUB2	YDL084W	POR1	P04840	283 aa	Known RBP	4.97	□□□□□ -1.61
SUB2	YDL084W	MRP17	P28778	131 aa		4.97	□□□□□ -1.61
SUB2	YDL084W	MTC7	P32633	139 aa		4.97	□□□□□ -1.61
SUB2	YDL084W	ALK2	P32789	676 aa	Predicted RBP	4.97	□□□□□ -1.61
SUB2	YDL084W	AHP1	P38013	176 aa	Known RBP	4.97	□□□□□ -1.61
SUB2	YDL084W	YBR063C	P38083	404 aa		4.97	□□□□□ -1.61
SUB2	YDL084W	MRP21	P38175	177 aa		4.97	□□□□□ -1.61
SUB2	YDL084W	YHR140W	P38842	239 aa		4.97	□□□□□ -1.61
SUB2	YDL084W	CWP2	P43497	92 aa		4.97	□□□□□ -1.61
SUB2	YDL084W	ATG27	P46989	271 aa		4.97	□□□□□ -1.61
SUB2	YDL084W	RAF1	Q06891	181 aa		4.97	□□□□□ -1.61
SUB2	YDL084W	YDL218W	Q07629	317 aa		4.97	□□□□□ -1.61
SUB2	YDL084W	MCA1	Q08601	432 aa		4.97	□□□□□ -1.61
SUB2	YDL084W	SLM3	Q12093	417 aa		4.97	□□□□□ -1.61
SUB2	YDL084W	RPS13	P05756	151 aa	Known RBP	4.96	□□□□□ -1.62
SUB2	YDL084W	ARF2	P19146	181 aa	Known RBP	4.96	□□□□□ -1.62
SUB2	YDL084W	TOM40	P23644	387 aa	Known RBP	4.96	□□□□□ -1.62
SUB2	YDL084W	ATX1	P38636	73 aa		4.96	□□□□□ -1.62
SUB2	YDL084W	YHR138C	P38841	114 aa	Predicted RBP	4.96	□□□□□ -1.62
SUB2	YDL084W	CYB5	P40312	120 aa		4.96	□□□□□ -1.62
SUB2	YDL084W	CAX4	P53223	239 aa		4.96	□□□□□ -1.62
SUB2	YDL084W	GRX5	Q02784	150 aa		4.96	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 10 ms