RNA–Protein interactions for RNA: YDL077C

VAM6, Transcript of Subunit of the HOPS endocytic tethering complex, yeastyeast

Gene VAM6, Length 3,150 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAM6YDL077C EMI1Q04406 187 aa0.94□□□□□ -2.26
VAM6YDL077C ENB1Q08299 606 aa0.94□□□□□ -2.26
VAM6YDL077C DGA1Q08650 418 aa0.94□□□□□ -2.26
VAM6YDL077C SME1Q12330 94 aaPredicted RBP0.94□□□□□ -2.26
VAM6YDL077C LAS17Q12446 633 aa0.94□□□□□ -2.26
VAM6YDL077C PEX11Q12462 236 aa0.94□□□□□ -2.26
VAM6YDL077C YPL247CQ12523 523 aa0.94□□□□□ -2.26
VAM6YDL077C ODC2Q99297 307 aa0.94□□□□□ -2.26
VAM6YDL077C SLH1P53327 1967 aaKnown RBP0.94□□□□□ -2.26
VAM6YDL077C MCK1P21965 375 aaKnown RBP0.94□□□□□ -2.26
VAM6YDL077C QCR9P22289 66 aa0.94□□□□□ -2.26
VAM6YDL077C PUP1P25043 261 aa0.94□□□□□ -2.26
VAM6YDL077C ARO4P32449 370 aaKnown RBP0.94□□□□□ -2.26
VAM6YDL077C SOR1P35497 357 aaKnown RBP0.94□□□□□ -2.26
VAM6YDL077C INM1P38710 295 aa0.94□□□□□ -2.26
VAM6YDL077C YHR130CP38834 111 aa0.94□□□□□ -2.26
VAM6YDL077C TAT2P38967 592 aa0.94□□□□□ -2.26
VAM6YDL077C PIC2P40035 300 aa0.94□□□□□ -2.26
VAM6YDL077C GLE2P40066 365 aa0.94□□□□□ -2.26
VAM6YDL077C YJL163CP46996 555 aa0.94□□□□□ -2.26
VAM6YDL077C TAX4P47030 604 aa0.94□□□□□ -2.26
VAM6YDL077C BAT2P47176 376 aaKnown RBP0.94□□□□□ -2.26
VAM6YDL077C TIS11P47977 285 aa0.94□□□□□ -2.26
VAM6YDL077C BRR6P53062 197 aa0.94□□□□□ -2.26
VAM6YDL077C SDC1Q03323 175 aa0.94□□□□□ -2.26
VAM6YDL077C YMR206WQ03695 313 aa0.94□□□□□ -2.26
VAM6YDL077C YMR082CQ04276 118 aa0.94□□□□□ -2.26
VAM6YDL077C MRPL51Q06090 140 aaPredicted RBP0.94□□□□□ -2.26
VAM6YDL077C SNT309Q06091 175 aaPredicted RBP0.94□□□□□ -2.26
VAM6YDL077C SOR2Q07786 357 aa0.94□□□□□ -2.26
VAM6YDL077C PAM18Q07914 168 aa0.94□□□□□ -2.26
VAM6YDL077C YOL024WQ08172 172 aa0.94□□□□□ -2.26
VAM6YDL077C IRC13Q08630 104 aa0.94□□□□□ -2.26
VAM6YDL077C YPQ1Q12010 308 aa0.94□□□□□ -2.26
VAM6YDL077C YTM1Q12024 460 aaPredicted RBP0.94□□□□□ -2.26
VAM6YDL077C MCT1Q12283 360 aa0.94□□□□□ -2.26
VAM6YDL077C ICT1Q12385 394 aa0.94□□□□□ -2.26
VAM6YDL077C YFL041W-AQ3E817 63 aa0.94□□□□□ -2.26
VAM6YDL077C FMP49A0A023PZB3 126 aa0.94□□□□□ -2.26
VAM6YDL077C VAR1P02381 398 aa0.94□□□□□ -2.26
VAM6YDL077C FCY2P17064 533 aa0.94□□□□□ -2.26
VAM6YDL077C MRPL20P22354 195 aaPredicted RBP0.94□□□□□ -2.26
VAM6YDL077C PDE1P22434 369 aa0.94□□□□□ -2.26
VAM6YDL077C CPR2P23285 205 aa0.94□□□□□ -2.26
VAM6YDL077C MIH1P23748 554 aa0.94□□□□□ -2.26
VAM6YDL077C CWP1P28319 239 aa0.94□□□□□ -2.26
VAM6YDL077C PEX2P32800 271 aa0.94□□□□□ -2.26
VAM6YDL077C FRM2P37261 193 aa0.94□□□□□ -2.26
VAM6YDL077C CBP4P37267 147 aa0.94□□□□□ -2.26
VAM6YDL077C SDS24P38314 527 aa0.94□□□□□ -2.26
VAM6YDL077C ATX1P38636 73 aa0.94□□□□□ -2.26
VAM6YDL077C YHR097CP38809 366 aaKnown RBP0.94□□□□□ -2.26
VAM6YDL077C YHR122WP38829 231 aa0.94□□□□□ -2.26
VAM6YDL077C SVP26P38869 228 aa0.94□□□□□ -2.26
VAM6YDL077C OXA1P39952 402 aa0.94□□□□□ -2.26
VAM6YDL077C YER076CP40049 302 aa0.94□□□□□ -2.26
VAM6YDL077C BTT1P40314 149 aaPredicted RBP0.94□□□□□ -2.26
VAM6YDL077C YIL169CP40442 995 aa0.94□□□□□ -2.26
VAM6YDL077C FIP1P45976 327 aa0.94□□□□□ -2.26
VAM6YDL077C SCD6P45978 349 aaKnown RBP RIP-Chip data0.94□□□□□ -2.26 RIP-Chip
VAM6YDL077C EMC4P53073 190 aa0.94□□□□□ -2.26
VAM6YDL077C ALG9P53868 555 aaKnown RBP0.94□□□□□ -2.26
VAM6YDL077C GRX5Q02784 150 aa0.94□□□□□ -2.26
VAM6YDL077C MZM1Q03429 123 aaPredicted RBP0.94□□□□□ -2.26
VAM6YDL077C DPP1Q05521 289 aa0.94□□□□□ -2.26
VAM6YDL077C STP4Q07351 490 aa0.94□□□□□ -2.26
VAM6YDL077C DCI1Q08558 271 aa0.94□□□□□ -2.26
VAM6YDL077C IES4Q08561 116 aa0.94□□□□□ -2.26
VAM6YDL077C SWM1Q12379 170 aa0.94□□□□□ -2.26
VAM6YDL077C YJR112W-AQ3E743 109 aa0.94□□□□□ -2.26
VAM6YDL077C TPI1P00942 248 aaKnown RBP0.93□□□□□ -2.26
VAM6YDL077C YAR066WP0CX18 203 aa0.93□□□□□ -2.26
VAM6YDL077C YHR214WP0CX19 203 aa0.93□□□□□ -2.26
VAM6YDL077C URA5P13298 226 aaKnown RBP0.93□□□□□ -2.26
VAM6YDL077C PHO85P17157 305 aa0.93□□□□□ -2.26
VAM6YDL077C ERG8P24521 451 aa0.93□□□□□ -2.26
VAM6YDL077C GLC7P32598 312 aaKnown RBP0.93□□□□□ -2.26
VAM6YDL077C VMA11P32842 164 aa0.93□□□□□ -2.26
VAM6YDL077C YKL107WP34251 309 aa0.93□□□□□ -2.26
VAM6YDL077C VBA2P38358 474 aaKnown RBP0.93□□□□□ -2.26
VAM6YDL077C YAR068WP39564 161 aa0.93□□□□□ -2.26
VAM6YDL077C YNL200CP40165 246 aaKnown RBP0.93□□□□□ -2.26
VAM6YDL077C RRT5P43607 289 aa0.93□□□□□ -2.26
VAM6YDL077C LCB3P47013 409 aa0.93□□□□□ -2.26
VAM6YDL077C TOS2P50078 622 aa0.93□□□□□ -2.26
VAM6YDL077C ATP19P81451 68 aa0.93□□□□□ -2.26
VAM6YDL077C IZH1Q03419 316 aa0.93□□□□□ -2.26
VAM6YDL077C NUP53Q03790 475 aa0.93□□□□□ -2.26
VAM6YDL077C TSA2Q04120 196 aa0.93□□□□□ -2.26
VAM6YDL077C YMR310CQ04867 317 aaPredicted RBP0.93□□□□□ -2.26
VAM6YDL077C NDD1Q08887 554 aa0.93□□□□□ -2.26
VAM6YDL077C RDL1Q12305 139 aaKnown RBP0.93□□□□□ -2.26
VAM6YDL077C YNL277W-AQ3E7Z0 62 aa0.93□□□□□ -2.26
VAM6YDL077C DET1Q99288 334 aaKnown RBP0.93□□□□□ -2.26
VAM6YDL077C CPA1P07258 411 aaKnown RBP0.93□□□□□ -2.26
VAM6YDL077C MDM10P18409 493 aa0.93□□□□□ -2.26
VAM6YDL077C TOM40P23644 387 aaKnown RBP0.93□□□□□ -2.26
VAM6YDL077C ELO2P25358 347 aa0.93□□□□□ -2.26
VAM6YDL077C RPS2P25443 254 aaKnown RBP0.93□□□□□ -2.26
VAM6YDL077C YIH1P25637 258 aa0.93□□□□□ -2.26
Retrieved 100 of 5,963 RNA–protein pairs in 31.5 ms