RNA–Protein interactions for RNA: ENST00000598907.5

SHKBP1-218, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-218ENST00000598907 FREM2Q5SZK8 3169 aa15.16■□□□□ 0.02
SHKBP1-218ENST00000598907 CCDC163A0A0D9SF12 145 aa15.15■□□□□ 0.02
SHKBP1-218ENST00000598907 KHNYNO15037 678 aaKnown RBP15.15■□□□□ 0.02
SHKBP1-218ENST00000598907 ASAP2O43150 1006 aa15.15■□□□□ 0.02
SHKBP1-218ENST00000598907 B3GAT3O94766 335 aa15.15■□□□□ 0.02
SHKBP1-218ENST00000598907 RHOBTB1O94844 696 aa15.15■□□□□ 0.02
SHKBP1-218ENST00000598907 MICAL2O94851 1124 aa15.15■□□□□ 0.02
SHKBP1-218ENST00000598907 THP07101 528 aa15.15■□□□□ 0.02
SHKBP1-218ENST00000598907 QARSP47897 775 aaKnown RBP15.15■□□□□ 0.02
SHKBP1-218ENST00000598907 SIM1P81133 766 aaPredicted RBP15.15■□□□□ 0.02
SHKBP1-218ENST00000598907 FAM160A1Q05DH4 1040 aa15.15■□□□□ 0.02
SHKBP1-218ENST00000598907 TNK2Q07912 1038 aa15.15■□□□□ 0.02
SHKBP1-218ENST00000598907 CAPSQ13938 189 aa15.15■□□□□ 0.02
SHKBP1-218ENST00000598907 TFDP1Q14186 410 aa15.15■□□□□ 0.02
SHKBP1-218ENST00000598907 XKR9Q5GH70 373 aa15.15■□□□□ 0.02
SHKBP1-218ENST00000598907 ANKS3Q6ZW76 656 aa15.15■□□□□ 0.02
SHKBP1-218ENST00000598907 ADAM32Q8TC27 787 aa15.15■□□□□ 0.02
SHKBP1-218ENST00000598907 LRRC15Q8TF66 581 aa15.15■□□□□ 0.02
SHKBP1-218ENST00000598907 CALML4Q96GE6 196 aa15.15■□□□□ 0.02
SHKBP1-218ENST00000598907 MTRQ99707 1265 aa15.15■□□□□ 0.02
SHKBP1-218ENST00000598907 TRPV4Q9HBA0 871 aa15.15■□□□□ 0.02
SHKBP1-218ENST00000598907 ASAH2Q9NR71 780 aa15.15■□□□□ 0.02
SHKBP1-218ENST00000598907 CCDC39Q9UFE4 941 aa15.15■□□□□ 0.02
SHKBP1-218ENST00000598907 INVSQ9Y283 1065 aa15.15■□□□□ 0.02
SHKBP1-218ENST00000598907 BACE2Q9Y5Z0 518 aa15.15■□□□□ 0.02
SHKBP1-218ENST00000598907 CYSRT1A8MQ03 144 aa15.14■□□□□ 0.01
SHKBP1-218ENST00000598907 CDX4O14627 284 aaPredicted RBP15.14■□□□□ 0.01
SHKBP1-218ENST00000598907 POLR2DO15514 142 aaKnown RBP15.14■□□□□ 0.01
SHKBP1-218ENST00000598907 RECQL4O94761 1208 aa15.14■□□□□ 0.01
SHKBP1-218ENST00000598907 ZNF202O95125 648 aa15.14■□□□□ 0.01
SHKBP1-218ENST00000598907 MBD3O95983 291 aa15.14■□□□□ 0.01
SHKBP1-218ENST00000598907 PLCG1P19174 1290 aa15.14■□□□□ 0.01
SHKBP1-218ENST00000598907 SYKP43405 635 aa15.14■□□□□ 0.01
SHKBP1-218ENST00000598907 MAPK8P45983 427 aa15.14■□□□□ 0.01
SHKBP1-218ENST00000598907 BRCC3P46736 316 aa15.14■□□□□ 0.01
SHKBP1-218ENST00000598907 CYP4A11Q02928 519 aa15.14■□□□□ 0.01
SHKBP1-218ENST00000598907 CTTNQ14247 550 aaKnown RBP15.14■□□□□ 0.01
SHKBP1-218ENST00000598907 PCBP1Q15365 356 aaKnown RBP eCLIP15.14■□□□□ 0.01
SHKBP1-218ENST00000598907 NAB2Q15742 525 aa15.14■□□□□ 0.01
SHKBP1-218ENST00000598907 GLRA4Q5JXX5 417 aa15.14■□□□□ 0.01
SHKBP1-218ENST00000598907 CCDC73Q6ZRK6 1079 aa15.14■□□□□ 0.01
SHKBP1-218ENST00000598907 C4orf19Q8IY42 314 aa15.14■□□□□ 0.01
SHKBP1-218ENST00000598907 SYNPOQ8N3V7 929 aa15.14■□□□□ 0.01
SHKBP1-218ENST00000598907 ZNF461Q8TAF7 563 aa15.14■□□□□ 0.01
SHKBP1-218ENST00000598907 SHKBP1Q8TBC3 707 aa15.14■□□□□ 0.01
SHKBP1-218ENST00000598907 ASAP3Q8TDY4 903 aa15.14■□□□□ 0.01
SHKBP1-218ENST00000598907 HNRNPLLQ8WVV9 542 aaKnown RBP15.14■□□□□ 0.01
SHKBP1-218ENST00000598907 ZNF512Q96ME7 567 aaPredicted RBP15.14■□□□□ 0.01
SHKBP1-218ENST00000598907 PYM1Q9BRP8 204 aaKnown RBP15.14■□□□□ 0.01
SHKBP1-218ENST00000598907 LXNQ9BS40 222 aa15.14■□□□□ 0.01
SHKBP1-218ENST00000598907 PANK2Q9BZ23 570 aa15.14■□□□□ 0.01
SHKBP1-218ENST00000598907 ZSWIM4Q9H7M6 989 aa15.14■□□□□ 0.01
SHKBP1-218ENST00000598907 KIAA1024Q9UPX6 916 aa15.14■□□□□ 0.01
SHKBP1-218ENST00000598907 XRCC6P12956 609 aaKnown RBP eCLIP15.13■□□□□ 0.01
SHKBP1-218ENST00000598907 FCHO2Q0JRZ9 810 aa15.13■□□□□ 0.01
SHKBP1-218ENST00000598907 TWF1Q12792 350 aa15.13■□□□□ 0.01
SHKBP1-218ENST00000598907 TMEM132AQ24JP5 1023 aa15.13■□□□□ 0.01
SHKBP1-218ENST00000598907 STXBP5Q5T5C0 1151 aa15.13■□□□□ 0.01
SHKBP1-218ENST00000598907 RRAGBQ5VZM2 374 aa15.13■□□□□ 0.01
SHKBP1-218ENST00000598907 KCNK18Q7Z418 384 aa15.13■□□□□ 0.01
SHKBP1-218ENST00000598907 TPH2Q8IWU9 490 aa15.13■□□□□ 0.01
SHKBP1-218ENST00000598907 EXOC8Q8IYI6 725 aa15.13■□□□□ 0.01
SHKBP1-218ENST00000598907 CHCHD4Q8N4Q1 142 aa15.13■□□□□ 0.01
SHKBP1-218ENST00000598907 PDILTQ8N807 584 aa15.13■□□□□ 0.01
SHKBP1-218ENST00000598907 IQUBQ8NA54 791 aa15.13■□□□□ 0.01
SHKBP1-218ENST00000598907 E2F7Q96AV8 911 aa15.13■□□□□ 0.01
SHKBP1-218ENST00000598907 LRIG1Q96JA1 1093 aa15.13■□□□□ 0.01
SHKBP1-218ENST00000598907 TIGD1Q96MW7 591 aa15.13■□□□□ 0.01
SHKBP1-218ENST00000598907 SLC32A1Q9H598 525 aa15.13■□□□□ 0.01
SHKBP1-218ENST00000598907 GOLGA2P5Q9HBQ8 144 aa15.13■□□□□ 0.01
SHKBP1-218ENST00000598907 XPNPEP1Q9NQW7 623 aa15.13■□□□□ 0.01
SHKBP1-218ENST00000598907 BLOC1S4Q9NUP1 217 aa15.13■□□□□ 0.01
SHKBP1-218ENST00000598907 DDX19AQ9NUU7 478 aaKnown RBP15.13■□□□□ 0.01
SHKBP1-218ENST00000598907 CEP72Q9P209 647 aa15.13■□□□□ 0.01
SHKBP1-218ENST00000598907 STK17AQ9UEE5 414 aa15.13■□□□□ 0.01
SHKBP1-218ENST00000598907 USP25Q9UHP3 1055 aa15.13■□□□□ 0.01
SHKBP1-218ENST00000598907 A0A1W2PRU2 124 aa15.12■□□□□ 0.01
SHKBP1-218ENST00000598907 ACTN4O43707 911 aaKnown RBP15.12■□□□□ 0.01
SHKBP1-218ENST00000598907 DKC1O60832 514 aaKnown RBP eCLIP15.12■□□□□ 0.01
SHKBP1-218ENST00000598907 ABLIM3O94929 683 aa15.12■□□□□ 0.01
SHKBP1-218ENST00000598907 YWHABP31946 246 aaKnown RBP15.12■□□□□ 0.01
SHKBP1-218ENST00000598907 CLCNKBP51801 687 aa15.12■□□□□ 0.01
SHKBP1-218ENST00000598907 SCAPQ12770 1279 aa15.12■□□□□ 0.01
SHKBP1-218ENST00000598907 MXD4Q14582 209 aaPredicted RBP15.12■□□□□ 0.01
SHKBP1-218ENST00000598907 CYP2U1Q7Z449 544 aa15.12■□□□□ 0.01
SHKBP1-218ENST00000598907 HAUS6Q7Z4H7 955 aa15.12■□□□□ 0.01
SHKBP1-218ENST00000598907 ELOA2Q8IYF1 753 aaPredicted RBP15.12■□□□□ 0.01
SHKBP1-218ENST00000598907 TCEAL8Q8IYN2 117 aa15.12■□□□□ 0.01
SHKBP1-218ENST00000598907 NACC1Q96RE7 527 aa15.12■□□□□ 0.01
SHKBP1-218ENST00000598907 PLIN2Q99541 437 aa15.12■□□□□ 0.01
SHKBP1-218ENST00000598907 CUEDC2Q9H467 287 aa15.12■□□□□ 0.01
SHKBP1-218ENST00000598907 SERTAD1Q9UHV2 236 aa15.12■□□□□ 0.01
SHKBP1-218ENST00000598907 NUP205Q92621 2012 aa15.12■□□□□ 0.01
SHKBP1-218ENST00000598907 A0A1B0GUA9 196 aa15.11■□□□□ 0.01
SHKBP1-218ENST00000598907 E9PMD0 336 aa15.11■□□□□ 0.01
SHKBP1-218ENST00000598907 DPYSL4O14531 572 aa15.11■□□□□ 0.01
SHKBP1-218ENST00000598907 ZBTB39O15060 712 aa15.11■□□□□ 0.01
SHKBP1-218ENST00000598907 RNF40O75150 1001 aa15.11■□□□□ 0.01
SHKBP1-218ENST00000598907 SLFN14P0C7P3 912 aa15.11■□□□□ 0.01
SHKBP1-218ENST00000598907 ATF2P15336 505 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms